RNA–Protein interactions for RNA: ENST00000489563.1

AC055855.1-201, humanhuman

BASIC

Gene AC055855.1, Length 579 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC055855.1-201ENST00000489563 RBM39Q14498 530 aaKnown RBP3.11□□□□□ -1.91
AC055855.1-201ENST00000489563 GPR33Q49SQ1 333 aa3.11□□□□□ -1.91
AC055855.1-201ENST00000489563 ZRANB3Q5FWF4 1079 aa3.11□□□□□ -1.91
AC055855.1-201ENST00000489563 OTUD3Q5T2D3 398 aaPredicted RBP3.11□□□□□ -1.91
AC055855.1-201ENST00000489563 GFI1BQ5VTD9 330 aa3.11□□□□□ -1.91
AC055855.1-201ENST00000489563 SUSD4Q5VX71 490 aa3.11□□□□□ -1.91
AC055855.1-201ENST00000489563 FAM166AQ6J272 317 aa3.11□□□□□ -1.91
AC055855.1-201ENST00000489563 CASC4Q6P4E1 433 aa3.11□□□□□ -1.91
AC055855.1-201ENST00000489563 NOTUMQ6P988 496 aa3.11□□□□□ -1.91
AC055855.1-201ENST00000489563 C11orf88Q6PI97 169 aa3.11□□□□□ -1.91
AC055855.1-201ENST00000489563 IL17RELQ6ZVW7 336 aa3.11□□□□□ -1.91
AC055855.1-201ENST00000489563 PTAR1Q7Z6K3 402 aaPredicted RBP3.11□□□□□ -1.91
AC055855.1-201ENST00000489563 HOGA1Q86XE5 327 aa3.11□□□□□ -1.91
AC055855.1-201ENST00000489563 LACC1Q8IV20 430 aa3.11□□□□□ -1.91
AC055855.1-201ENST00000489563 RCOR2Q8IZ40 523 aa3.11□□□□□ -1.91
AC055855.1-201ENST00000489563 NHLRC2Q8NBF2 726 aa3.11□□□□□ -1.91
AC055855.1-201ENST00000489563 OR1L3Q8NH93 324 aa3.11□□□□□ -1.91
AC055855.1-201ENST00000489563 GRK7Q8WTQ7 553 aa3.11□□□□□ -1.91
AC055855.1-201ENST00000489563 PIK3R3Q92569 461 aa3.11□□□□□ -1.91
AC055855.1-201ENST00000489563 RIT1Q92963 219 aa3.11□□□□□ -1.91
AC055855.1-201ENST00000489563 P2RX5Q93086 422 aa3.11□□□□□ -1.91
AC055855.1-201ENST00000489563 GMPPAQ96IJ6 420 aaPredicted RBP3.11□□□□□ -1.91
AC055855.1-201ENST00000489563 C10orf90Q96M02 699 aa3.11□□□□□ -1.91
AC055855.1-201ENST00000489563 GDAP1L1Q96MZ0 367 aa3.11□□□□□ -1.91
AC055855.1-201ENST00000489563 NECTIN4Q96NY8 510 aa3.11□□□□□ -1.91
AC055855.1-201ENST00000489563 KLHL5Q96PQ7 755 aa3.11□□□□□ -1.91
AC055855.1-201ENST00000489563 BTBD9Q96Q07 612 aa3.11□□□□□ -1.91
AC055855.1-201ENST00000489563 PARK7Q99497 189 aaKnown RBP3.11□□□□□ -1.91
AC055855.1-201ENST00000489563 CDCA3Q99618 268 aaPredicted RBP3.11□□□□□ -1.91
AC055855.1-201ENST00000489563 LPAR4Q99677 370 aa3.11□□□□□ -1.91
AC055855.1-201ENST00000489563 LITAFQ99732 161 aa3.11□□□□□ -1.91
AC055855.1-201ENST00000489563 FUCA2Q9BTY2 467 aa3.11□□□□□ -1.91
AC055855.1-201ENST00000489563 CDK19Q9BWU1 502 aa3.11□□□□□ -1.91
AC055855.1-201ENST00000489563 THAP2Q9H0W7 228 aa3.11□□□□□ -1.91
AC055855.1-201ENST00000489563 WDR13Q9H1Z4 485 aa3.11□□□□□ -1.91
AC055855.1-201ENST00000489563 COPS7BQ9H9Q2 264 aaPredicted RBP3.11□□□□□ -1.91
AC055855.1-201ENST00000489563 LMAN1LQ9HAT1 526 aa3.11□□□□□ -1.91
AC055855.1-201ENST00000489563 C2orf42Q9NWW7 574 aa3.11□□□□□ -1.91
AC055855.1-201ENST00000489563 VPS18Q9P253 973 aa3.11□□□□□ -1.91
AC055855.1-201ENST00000489563 NOL7Q9UMY1 257 aaKnown RBP3.11□□□□□ -1.91
AC055855.1-201ENST00000489563 RUVBL2Q9Y230 463 aaKnown RBP3.11□□□□□ -1.91
AC055855.1-201ENST00000489563 WDR37Q9Y2I8 494 aa3.11□□□□□ -1.91
AC055855.1-201ENST00000489563 MYH14Q7Z406 1995 aaKnown RBP3.11□□□□□ -1.91
AC055855.1-201ENST00000489563 NWD1Q149M9 1564 aa3.1□□□□□ -1.91
AC055855.1-201ENST00000489563 TRBV5-5A0A0J9YX44 114 aa3.1□□□□□ -1.91
AC055855.1-201ENST00000489563 OOEPA6NGQ2 149 aa3.1□□□□□ -1.91
AC055855.1-201ENST00000489563 PRSS46E5RG02 174 aa3.1□□□□□ -1.91
AC055855.1-201ENST00000489563 F8VVB4 439 aa3.1□□□□□ -1.91
AC055855.1-201ENST00000489563 F8VWA3 439 aa3.1□□□□□ -1.91
AC055855.1-201ENST00000489563 STX6O43752 255 aa3.1□□□□□ -1.91
AC055855.1-201ENST00000489563 EDIL3O43854 480 aa3.1□□□□□ -1.91
AC055855.1-201ENST00000489563 SELENOFO60613 162 aa3.1□□□□□ -1.91
AC055855.1-201ENST00000489563 TGDSO95455 350 aa3.1□□□□□ -1.91
AC055855.1-201ENST00000489563 SEC24AO95486 1093 aa3.1□□□□□ -1.91
AC055855.1-201ENST00000489563 BAG3O95817 575 aa3.1□□□□□ -1.91
AC055855.1-201ENST00000489563 MOCS2O96007 188 aaPredicted RBP3.1□□□□□ -1.91
AC055855.1-201ENST00000489563 IGLV1-44P01699 117 aa3.1□□□□□ -1.91
AC055855.1-201ENST00000489563 ATP1B1P05026 303 aa3.1□□□□□ -1.91
AC055855.1-201ENST00000489563 ANKRD34CP0C6C1 535 aa3.1□□□□□ -1.91
AC055855.1-201ENST00000489563 F3P13726 295 aa3.1□□□□□ -1.91
AC055855.1-201ENST00000489563 CEBPBP17676 345 aa3.1□□□□□ -1.91
AC055855.1-201ENST00000489563 SSTR1P30872 391 aa3.1□□□□□ -1.91
AC055855.1-201ENST00000489563 CTNNA1P35221 906 aaKnown RBP3.1□□□□□ -1.91
AC055855.1-201ENST00000489563 YWHAHQ04917 246 aaPredicted RBP3.1□□□□□ -1.91
AC055855.1-201ENST00000489563 IL10RBQ08334 325 aa3.1□□□□□ -1.91
AC055855.1-201ENST00000489563 SGCGQ13326 291 aa3.1□□□□□ -1.91
AC055855.1-201ENST00000489563 TRIM29Q14134 588 aa3.1□□□□□ -1.91
AC055855.1-201ENST00000489563 CCDC6Q16204 474 aa3.1□□□□□ -1.91
AC055855.1-201ENST00000489563 EXT1Q16394 746 aa3.1□□□□□ -1.91
AC055855.1-201ENST00000489563 ZNF74Q16587 644 aa3.1□□□□□ -1.91
AC055855.1-201ENST00000489563 SGSM1Q2NKQ1 1148 aa3.1□□□□□ -1.91
AC055855.1-201ENST00000489563 PWWP2BQ6NUJ5 590 aa3.1□□□□□ -1.91
AC055855.1-201ENST00000489563 BHLHB9Q6PI77 547 aa3.1□□□□□ -1.91
AC055855.1-201ENST00000489563 SLC25A47Q6Q0C1 308 aa3.1□□□□□ -1.91
AC055855.1-201ENST00000489563 BTN2A1Q7KYR7 527 aa3.1□□□□□ -1.91
AC055855.1-201ENST00000489563 PIGWQ7Z7B1 504 aa3.1□□□□□ -1.91
AC055855.1-201ENST00000489563 HOOK3Q86VS8 718 aa3.1□□□□□ -1.91
AC055855.1-201ENST00000489563 GBP7Q8N8V2 638 aaPredicted RBP3.1□□□□□ -1.91
AC055855.1-201ENST00000489563 LRTM2Q8N967 370 aa3.1□□□□□ -1.91
AC055855.1-201ENST00000489563 UXS1Q8NBZ7 420 aa3.1□□□□□ -1.91
AC055855.1-201ENST00000489563 OR5AP2Q8NGF4 316 aa3.1□□□□□ -1.91
AC055855.1-201ENST00000489563 OR4C15Q8NGM1 316 aa3.1□□□□□ -1.91
AC055855.1-201ENST00000489563 OR10G8Q8NGN5 311 aa3.1□□□□□ -1.91
AC055855.1-201ENST00000489563 NCOA7Q8NI08 942 aa3.1□□□□□ -1.91
AC055855.1-201ENST00000489563 GDAP1Q8TB36 358 aa3.1□□□□□ -1.91
AC055855.1-201ENST00000489563 HCAR2Q8TDS4 363 aa3.1□□□□□ -1.91
AC055855.1-201ENST00000489563 UBLCP1Q8WVY7 318 aaPredicted RBP3.1□□□□□ -1.91
AC055855.1-201ENST00000489563 APOBEC4Q8WW27 367 aaKnown RBP3.1□□□□□ -1.91
AC055855.1-201ENST00000489563 MLPHQ9BV36 600 aaPredicted RBP3.1□□□□□ -1.91
AC055855.1-201ENST00000489563 RBM4Q9BWF3 364 aaKnown RBP3.1□□□□□ -1.91
AC055855.1-201ENST00000489563 FGF22Q9HCT0 170 aa3.1□□□□□ -1.91
AC055855.1-201ENST00000489563 RAB9BQ9NP90 201 aa3.1□□□□□ -1.91
AC055855.1-201ENST00000489563 PHPT1Q9NRX4 125 aaPredicted RBP3.1□□□□□ -1.91
AC055855.1-201ENST00000489563 MAN2C1Q9NTJ4 1040 aa3.1□□□□□ -1.91
AC055855.1-201ENST00000489563 ATAD3AQ9NVI7 634 aa3.1□□□□□ -1.91
AC055855.1-201ENST00000489563 SEPT10Q9P0V9 454 aa3.1□□□□□ -1.91
AC055855.1-201ENST00000489563 SLC12A6Q9UHW9 1150 aa3.1□□□□□ -1.91
AC055855.1-201ENST00000489563 RIMS1Q86UR5 1692 aaKnown RBP3.1□□□□□ -1.91
AC055855.1-201ENST00000489563 CFAP47Q6ZTR5 3102 aa3.1□□□□□ -1.91
AC055855.1-201ENST00000489563 BLMP54132 1417 aaPredicted RBP3.1□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 83.2 ms