RNA–Protein interactions for RNA: ENST00000488920.2

CCHCR1-215, Transcript of coiled-coil alpha-helical rod protein 1, humanhuman

TSL 3

Gene CCHCR1, Length 715 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1-215ENST00000488920 NOVA2Q9UNW9 492 aaKnown RBP11.32□□□□□ -0.6
CCHCR1-215ENST00000488920 NTNG1Q9Y2I2 539 aa11.32□□□□□ -0.6
CCHCR1-215ENST00000488920 PTPN13Q12923 2485 aa11.31□□□□□ -0.6
CCHCR1-215ENST00000488920 IGHV1-45A0A0A0MS14 117 aa11.31□□□□□ -0.6
CCHCR1-215ENST00000488920 SGK494L7N484 410 aa11.31□□□□□ -0.6
CCHCR1-215ENST00000488920 TP73O15350 636 aa11.31□□□□□ -0.6
CCHCR1-215ENST00000488920 SEC31AO94979 1220 aaKnown RBP11.31□□□□□ -0.6
CCHCR1-215ENST00000488920 BMP10O95393 424 aa11.31□□□□□ -0.6
CCHCR1-215ENST00000488920 GUCA1CO95843 209 aa11.31□□□□□ -0.6
CCHCR1-215ENST00000488920 CELA2AP08217 269 aa11.31□□□□□ -0.6
CCHCR1-215ENST00000488920 PRR35P0CG20 571 aa11.31□□□□□ -0.6
CCHCR1-215ENST00000488920 SAT1P21673 171 aa11.31□□□□□ -0.6
CCHCR1-215ENST00000488920 FDXRP22570 491 aa11.31□□□□□ -0.6
CCHCR1-215ENST00000488920 PAFAH1B1P43034 410 aa11.31□□□□□ -0.6
CCHCR1-215ENST00000488920 EFNA3P52797 238 aa11.31□□□□□ -0.6
CCHCR1-215ENST00000488920 MRPS25P82663 173 aaKnown RBP11.31□□□□□ -0.6
CCHCR1-215ENST00000488920 PDIA2Q13087 525 aaKnown RBP11.31□□□□□ -0.6
CCHCR1-215ENST00000488920 STEAP4Q687X5 459 aa11.31□□□□□ -0.6
CCHCR1-215ENST00000488920 CAPN13Q6MZZ7 669 aaPredicted RBP11.31□□□□□ -0.6
CCHCR1-215ENST00000488920 KCT2Q8NC54 265 aa11.31□□□□□ -0.6
CCHCR1-215ENST00000488920 PPP4R1Q8TF05 950 aa11.31□□□□□ -0.6
CCHCR1-215ENST00000488920 PSMF1Q92530 271 aa11.31□□□□□ -0.6
CCHCR1-215ENST00000488920 ANP32BQ92688 251 aaKnown RBP11.31□□□□□ -0.6
CCHCR1-215ENST00000488920 LRRC39Q96DD0 335 aa11.31□□□□□ -0.6
CCHCR1-215ENST00000488920 THAP11Q96EK4 314 aa11.31□□□□□ -0.6
CCHCR1-215ENST00000488920 SNF8Q96H20 258 aa11.31□□□□□ -0.6
CCHCR1-215ENST00000488920 LMF1Q96S06 567 aa11.31□□□□□ -0.6
CCHCR1-215ENST00000488920 KRT12Q99456 494 aa11.31□□□□□ -0.6
CCHCR1-215ENST00000488920 TRIM54Q9BYV2 358 aa11.31□□□□□ -0.6
CCHCR1-215ENST00000488920 EPS8L2Q9H6S3 715 aa11.31□□□□□ -0.6
CCHCR1-215ENST00000488920 PLA2G3Q9NZ20 509 aa11.31□□□□□ -0.6
CCHCR1-215ENST00000488920 HCN3Q9P1Z3 774 aa11.31□□□□□ -0.6
CCHCR1-215ENST00000488920 PTGFRNQ9P2B2 879 aa11.31□□□□□ -0.6
CCHCR1-215ENST00000488920 IKZF3Q9UKT9 509 aa11.31□□□□□ -0.6
CCHCR1-215ENST00000488920 SNX24Q9Y343 169 aa11.31□□□□□ -0.6
CCHCR1-215ENST00000488920 PSAT1Q9Y617 370 aa11.31□□□□□ -0.6
CCHCR1-215ENST00000488920 DOPEY2Q9Y3R5 2298 aa11.31□□□□□ -0.6
CCHCR1-215ENST00000488920 PABPN1LA6NDY0 278 aaKnown RBP11.3□□□□□ -0.6
CCHCR1-215ENST00000488920 OR2W5A6NFC9 320 aa11.3□□□□□ -0.6
CCHCR1-215ENST00000488920 EFCAB8A8MWE9 144 aa11.3□□□□□ -0.6
CCHCR1-215ENST00000488920 H0YIG0 161 aa11.3□□□□□ -0.6
CCHCR1-215ENST00000488920 SERPINA7P05543 415 aa11.3□□□□□ -0.6
CCHCR1-215ENST00000488920 RNF224P0DH78 156 aa11.3□□□□□ -0.6
CCHCR1-215ENST00000488920 IL1RNP18510 177 aa11.3□□□□□ -0.6
CCHCR1-215ENST00000488920 CCND1P24385 295 aa11.3□□□□□ -0.6
CCHCR1-215ENST00000488920 GRK3P35626 688 aa11.3□□□□□ -0.6
CCHCR1-215ENST00000488920 RPL21P46778 160 aaKnown RBP11.3□□□□□ -0.6
CCHCR1-215ENST00000488920 MEF2AQ02078 507 aaPredicted RBP11.3□□□□□ -0.6
CCHCR1-215ENST00000488920 MGAT5Q09328 741 aa11.3□□□□□ -0.6
CCHCR1-215ENST00000488920 CDC16Q13042 620 aa11.3□□□□□ -0.6
CCHCR1-215ENST00000488920 MFAP5Q13361 173 aa11.3□□□□□ -0.6
CCHCR1-215ENST00000488920 ZNF169Q14929 603 aaPredicted RBP11.3□□□□□ -0.6
CCHCR1-215ENST00000488920 FASTKD3Q14CZ7 662 aaKnown RBP11.3□□□□□ -0.6
CCHCR1-215ENST00000488920 TLR1Q15399 786 aa11.3□□□□□ -0.6
CCHCR1-215ENST00000488920 MFSD4BQ5TF39 518 aa11.3□□□□□ -0.6
CCHCR1-215ENST00000488920 DUPD1Q68J44 220 aa11.3□□□□□ -0.6
CCHCR1-215ENST00000488920 HIST2H2BCQ6DN03 193 aa11.3□□□□□ -0.6
CCHCR1-215ENST00000488920 FAM45BPQ6NSW5 357 aa11.3□□□□□ -0.6
CCHCR1-215ENST00000488920 TMEM214Q6NUQ4 689 aaKnown RBP11.3□□□□□ -0.6
CCHCR1-215ENST00000488920 TMEM205Q6UW68 189 aa11.3□□□□□ -0.6
CCHCR1-215ENST00000488920 LCTLQ6UWM7 567 aa11.3□□□□□ -0.6
CCHCR1-215ENST00000488920 TMEM207Q6UWW9 146 aa11.3□□□□□ -0.6
CCHCR1-215ENST00000488920 STRA8Q7Z7C7 330 aa11.3□□□□□ -0.6
CCHCR1-215ENST00000488920 ASPGQ86U10 573 aa11.3□□□□□ -0.6
CCHCR1-215ENST00000488920 SLC26A11Q86WA9 606 aa11.3□□□□□ -0.6
CCHCR1-215ENST00000488920 SIRT6Q8N6T7 355 aa11.3□□□□□ -0.6
CCHCR1-215ENST00000488920 MFSD9Q8NBP5 474 aa11.3□□□□□ -0.6
CCHCR1-215ENST00000488920 CAMKVQ8NCB2 501 aa11.3□□□□□ -0.6
CCHCR1-215ENST00000488920 FBXO36Q8NEA4 188 aa11.3□□□□□ -0.6
CCHCR1-215ENST00000488920 OR56A3Q8NH54 315 aa11.3□□□□□ -0.6
CCHCR1-215ENST00000488920 OR51Q1Q8NH59 317 aa11.3□□□□□ -0.6
CCHCR1-215ENST00000488920 ZCCHC10Q8TBK6 192 aa11.3□□□□□ -0.6
CCHCR1-215ENST00000488920 FAM45AQ8TCE6 357 aa11.3□□□□□ -0.6
CCHCR1-215ENST00000488920 BRIX1Q8TDN6 353 aaKnown RBP11.3□□□□□ -0.6
CCHCR1-215ENST00000488920 SSC4DQ8WTU2 575 aa11.3□□□□□ -0.6
CCHCR1-215ENST00000488920 SLC13A3Q8WWT9 602 aa11.3□□□□□ -0.6
CCHCR1-215ENST00000488920 TM4SF19Q96DZ7 209 aa11.3□□□□□ -0.6
CCHCR1-215ENST00000488920 OR4K3Q96R72 315 aa11.3□□□□□ -0.6
CCHCR1-215ENST00000488920 BARD1Q99728 777 aaKnown RBP11.3□□□□□ -0.6
CCHCR1-215ENST00000488920 HAUS8Q9BT25 410 aa11.3□□□□□ -0.6
CCHCR1-215ENST00000488920 VN1R1Q9GZP7 353 aa11.3□□□□□ -0.6
CCHCR1-215ENST00000488920 ZNF700Q9H0M5 742 aa11.3□□□□□ -0.6
CCHCR1-215ENST00000488920 ZFATQ9P243 1243 aa11.3□□□□□ -0.6
CCHCR1-215ENST00000488920 CORO1CQ9ULV4 474 aaPredicted RBP11.3□□□□□ -0.6
CCHCR1-215ENST00000488920 USP9XQ93008 2570 aaPredicted RBP11.3□□□□□ -0.6
CCHCR1-215ENST00000488920 ANKRD12Q6UB98 2062 aa11.29□□□□□ -0.6
CCHCR1-215ENST00000488920 RP1L1Q8IWN7 2480 aaPredicted RBP11.29□□□□□ -0.6
CCHCR1-215ENST00000488920 LOC102723996A0A087X1L8 192 aa11.29□□□□□ -0.6
CCHCR1-215ENST00000488920 IGHV3-20A0A0C4DH32 117 aa11.29□□□□□ -0.6
CCHCR1-215ENST00000488920 A0A1W2PQ72 361 aa11.29□□□□□ -0.6
CCHCR1-215ENST00000488920 ANKUB1A6NFN9 424 aa11.29□□□□□ -0.6
CCHCR1-215ENST00000488920 CCDC188H7C350 402 aa11.29□□□□□ -0.6
CCHCR1-215ENST00000488920 CDC7O00311 574 aa11.29□□□□□ -0.6
CCHCR1-215ENST00000488920 FANCGO15287 622 aa11.29□□□□□ -0.6
CCHCR1-215ENST00000488920 OR1F1O43749 312 aa11.29□□□□□ -0.6
CCHCR1-215ENST00000488920 PIAS1O75925 651 aa11.29□□□□□ -0.6
CCHCR1-215ENST00000488920 WFS1O76024 890 aa11.29□□□□□ -0.6
CCHCR1-215ENST00000488920 NSA2O95478 260 aaKnown RBP11.29□□□□□ -0.6
CCHCR1-215ENST00000488920 F10P00742 488 aa11.29□□□□□ -0.6
CCHCR1-215ENST00000488920 C8orf89P0DMQ9 161 aa11.29□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms