RNA–Protein interactions for RNA: ENST00000487029.1

SNRNP27-204, Transcript of small nuclear ribonucleoprotein U4/U6.U5 subunit 27, humanhuman

TSL 3

Gene SNRNP27, Length 604 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP27-204ENST00000487029 STX1BP61266 288 aa3.14□□□□□ -1.91
SNRNP27-204ENST00000487029 RCN2Q14257 317 aa3.14□□□□□ -1.91
SNRNP27-204ENST00000487029 CCDC6Q16204 474 aa3.14□□□□□ -1.91
SNRNP27-204ENST00000487029 IQCCQ4KMZ1 466 aa3.14□□□□□ -1.91
SNRNP27-204ENST00000487029 ZNF789Q5FWF6 425 aa3.14□□□□□ -1.91
SNRNP27-204ENST00000487029 ANKRD46Q86W74 232 aa3.14□□□□□ -1.91
SNRNP27-204ENST00000487029 SIAH3Q8IW03 269 aa3.14□□□□□ -1.91
SNRNP27-204ENST00000487029 APLFQ8IW19 511 aaPredicted RBP3.14□□□□□ -1.91
SNRNP27-204ENST00000487029 CCDC60Q8IWA6 550 aaPredicted RBP3.14□□□□□ -1.91
SNRNP27-204ENST00000487029 UNC45BQ8IWX7 931 aa3.14□□□□□ -1.91
SNRNP27-204ENST00000487029 CLYBLQ8N0X4 340 aa3.14□□□□□ -1.91
SNRNP27-204ENST00000487029 C10orf53Q8N6V4 93 aa3.14□□□□□ -1.91
SNRNP27-204ENST00000487029 NIPA2Q8N8Q9 360 aa3.14□□□□□ -1.91
SNRNP27-204ENST00000487029 GOLGA6L2Q8N9W4 650 aaPredicted RBP3.14□□□□□ -1.91
SNRNP27-204ENST00000487029 TRIM58Q8NG06 486 aa3.14□□□□□ -1.91
SNRNP27-204ENST00000487029 OR7A2PQ8NGA2 310 aa3.14□□□□□ -1.91
SNRNP27-204ENST00000487029 UBLCP1Q8WVY7 318 aaPredicted RBP3.14□□□□□ -1.91
SNRNP27-204ENST00000487029 SNRNP40Q96DI7 357 aaKnown RBP3.14□□□□□ -1.91
SNRNP27-204ENST00000487029 KLHL5Q96PQ7 755 aa3.14□□□□□ -1.91
SNRNP27-204ENST00000487029 BTBD9Q96Q07 612 aa3.14□□□□□ -1.91
SNRNP27-204ENST00000487029 CDCA3Q99618 268 aaPredicted RBP3.14□□□□□ -1.91
SNRNP27-204ENST00000487029 ATG101Q9BSB4 218 aa3.14□□□□□ -1.91
SNRNP27-204ENST00000487029 THAP2Q9H0W7 228 aa3.14□□□□□ -1.91
SNRNP27-204ENST00000487029 UBQLN3Q9H347 655 aa3.14□□□□□ -1.91
SNRNP27-204ENST00000487029 RNF121Q9H920 327 aa3.14□□□□□ -1.91
SNRNP27-204ENST00000487029 TMEM161AQ9NX61 479 aa3.14□□□□□ -1.91
SNRNP27-204ENST00000487029 CNIH4Q9P003 139 aa3.14□□□□□ -1.91
SNRNP27-204ENST00000487029 FBXL5Q9UKA1 691 aa3.14□□□□□ -1.91
SNRNP27-204ENST00000487029 GPR132Q9UNW8 380 aa3.14□□□□□ -1.91
SNRNP27-204ENST00000487029 TRAV18A0A075B6X5 111 aa3.13□□□□□ -1.91
SNRNP27-204ENST00000487029 A0A1B0GU03 582 aa3.13□□□□□ -1.91
SNRNP27-204ENST00000487029 LRRD1A4D1F6 860 aa3.13□□□□□ -1.91
SNRNP27-204ENST00000487029 NPIPA3F8WFD2 350 aa3.13□□□□□ -1.91
SNRNP27-204ENST00000487029 FPGTO14772 594 aa3.13□□□□□ -1.91
SNRNP27-204ENST00000487029 EXTL3O43909 919 aa3.13□□□□□ -1.91
SNRNP27-204ENST00000487029 RAD51DO75771 328 aa3.13□□□□□ -1.91
SNRNP27-204ENST00000487029 CDC123O75794 336 aaPredicted RBP3.13□□□□□ -1.91
SNRNP27-204ENST00000487029 AP2A2O94973 939 aa3.13□□□□□ -1.91
SNRNP27-204ENST00000487029 GOSR1O95249 250 aa3.13□□□□□ -1.91
SNRNP27-204ENST00000487029 CD48P09326 243 aa3.13□□□□□ -1.91
SNRNP27-204ENST00000487029 C8orf89P0DMQ9 161 aa3.13□□□□□ -1.91
SNRNP27-204ENST00000487029 CD59P13987 128 aa3.13□□□□□ -1.91
SNRNP27-204ENST00000487029 ATP6V1B1P15313 513 aa3.13□□□□□ -1.91
SNRNP27-204ENST00000487029 SSTR1P30872 391 aa3.13□□□□□ -1.91
SNRNP27-204ENST00000487029 DNA2P51530 1060 aa3.13□□□□□ -1.91
SNRNP27-204ENST00000487029 TRIM29Q14134 588 aa3.13□□□□□ -1.91
SNRNP27-204ENST00000487029 TEAD2Q15562 447 aa3.13□□□□□ -1.91
SNRNP27-204ENST00000487029 EXT1Q16394 746 aa3.13□□□□□ -1.91
SNRNP27-204ENST00000487029 FUT11Q495W5 492 aa3.13□□□□□ -1.91
SNRNP27-204ENST00000487029 SLC10A5Q5PT55 438 aa3.13□□□□□ -1.91
SNRNP27-204ENST00000487029 FAM53AQ6NSI3 398 aaPredicted RBP3.13□□□□□ -1.91
SNRNP27-204ENST00000487029 PODNL1Q6PEZ8 512 aa3.13□□□□□ -1.91
SNRNP27-204ENST00000487029 ZNF790Q6PG37 636 aa3.13□□□□□ -1.91
SNRNP27-204ENST00000487029 TMEM207Q6UWW9 146 aa3.13□□□□□ -1.91
SNRNP27-204ENST00000487029 PRUNE1Q86TP1 453 aa3.13□□□□□ -1.91
SNRNP27-204ENST00000487029 MYPOPQ86VE0 399 aaPredicted RBP3.13□□□□□ -1.91
SNRNP27-204ENST00000487029 PRSS35Q8N3Z0 413 aa3.13□□□□□ -1.91
SNRNP27-204ENST00000487029 ZNF713Q8N859 430 aaPredicted RBP3.13□□□□□ -1.91
SNRNP27-204ENST00000487029 LRTM2Q8N967 370 aa3.13□□□□□ -1.91
SNRNP27-204ENST00000487029 SLC37A3Q8NCC5 494 aa3.13□□□□□ -1.91
SNRNP27-204ENST00000487029 MSANTD4Q8NCY6 345 aa3.13□□□□□ -1.91
SNRNP27-204ENST00000487029 OR1L3Q8NH93 324 aa3.13□□□□□ -1.91
SNRNP27-204ENST00000487029 CKAP2Q8WWK9 683 aa3.13□□□□□ -1.91
SNRNP27-204ENST00000487029 C10orf90Q96M02 699 aa3.13□□□□□ -1.91
SNRNP27-204ENST00000487029 TSSK2Q96PF2 358 aa3.13□□□□□ -1.91
SNRNP27-204ENST00000487029 F2RL3Q96RI0 385 aa3.13□□□□□ -1.91
SNRNP27-204ENST00000487029 LPAR4Q99677 370 aa3.13□□□□□ -1.91
SNRNP27-204ENST00000487029 C10orf88Q9H8K7 445 aa3.13□□□□□ -1.91
SNRNP27-204ENST00000487029 RAVER2Q9HCJ3 691 aaKnown RBP3.13□□□□□ -1.91
SNRNP27-204ENST00000487029 RAB9BQ9NP90 201 aa3.13□□□□□ -1.91
SNRNP27-204ENST00000487029 SCRT2Q9NQ03 307 aa3.13□□□□□ -1.91
SNRNP27-204ENST00000487029 ZNF71Q9NQZ8 489 aaPredicted RBP3.13□□□□□ -1.91
SNRNP27-204ENST00000487029 IARS2Q9NSE4 1012 aaKnown RBP3.13□□□□□ -1.91
SNRNP27-204ENST00000487029 PDRG1Q9NUG6 133 aa3.13□□□□□ -1.91
SNRNP27-204ENST00000487029 C2orf42Q9NWW7 574 aa3.13□□□□□ -1.91
SNRNP27-204ENST00000487029 MTRRQ9UBK8 725 aa3.13□□□□□ -1.91
SNRNP27-204ENST00000487029 IL36AQ9UHA7 158 aa3.13□□□□□ -1.91
SNRNP27-204ENST00000487029 NOCTQ9UK39 431 aaKnown RBP3.13□□□□□ -1.91
SNRNP27-204ENST00000487029 GMEB2Q9UKD1 530 aa3.13□□□□□ -1.91
SNRNP27-204ENST00000487029 HBS1LQ9Y450 684 aaKnown RBP3.13□□□□□ -1.91
SNRNP27-204ENST00000487029 KIAA1210Q9ULL0 1709 aa3.13□□□□□ -1.91
SNRNP27-204ENST00000487029 IGHV4-4A0A075B6R2 117 aa3.12□□□□□ -1.91
SNRNP27-204ENST00000487029 MSGN1A6NI15 193 aa3.12□□□□□ -1.91
SNRNP27-204ENST00000487029 YES1P07947 543 aa3.12□□□□□ -1.91
SNRNP27-204ENST00000487029 PATE4P0C8F1 98 aa3.12□□□□□ -1.91
SNRNP27-204ENST00000487029 SP9P0CG40 484 aa3.12□□□□□ -1.91
SNRNP27-204ENST00000487029 CYP2A7P20853 494 aa3.12□□□□□ -1.91
SNRNP27-204ENST00000487029 CHRNB4P30926 498 aa3.12□□□□□ -1.91
SNRNP27-204ENST00000487029 DUTP33316 252 aaKnown RBP3.12□□□□□ -1.91
SNRNP27-204ENST00000487029 MAP2K2P36507 400 aa3.12□□□□□ -1.91
SNRNP27-204ENST00000487029 OR3A1P47881 315 aa3.12□□□□□ -1.91
SNRNP27-204ENST00000487029 LBX1P52954 281 aa3.12□□□□□ -1.91
SNRNP27-204ENST00000487029 CLDN17P56750 224 aa3.12□□□□□ -1.91
SNRNP27-204ENST00000487029 FCN2Q15485 313 aa3.12□□□□□ -1.91
SNRNP27-204ENST00000487029 ZNF770Q6IQ21 691 aaPredicted RBP3.12□□□□□ -1.91
SNRNP27-204ENST00000487029 PSRC1Q6PGN9 363 aaPredicted RBP3.12□□□□□ -1.91
SNRNP27-204ENST00000487029 CPEB2Q7Z5Q1 589 aaKnown RBP3.12□□□□□ -1.91
SNRNP27-204ENST00000487029 KRTAP7-1Q8IUC3 87 aa3.12□□□□□ -1.91
SNRNP27-204ENST00000487029 CROCCP3Q8IVE0 287 aa3.12□□□□□ -1.91
SNRNP27-204ENST00000487029 FAM89BQ8N5H3 189 aa3.12□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms