RNA–Protein interactions for RNA: ENST00000484886.1

SNX17-206, Transcript of sorting nexin 17, humanhuman

TSL 2

Gene SNX17, Length 568 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX17-206ENST00000484886 KLC3Q6P597 504 aa18.22■□□□□ 0.51
SNX17-206ENST00000484886 SHISA6Q6ZSJ9 500 aa18.22■□□□□ 0.51
SNX17-206ENST00000484886 COX15Q7KZN9 410 aa18.22■□□□□ 0.51
SNX17-206ENST00000484886 VN1R4Q7Z5H5 301 aa18.22■□□□□ 0.51
SNX17-206ENST00000484886 ASPGQ86U10 573 aa18.22■□□□□ 0.51
SNX17-206ENST00000484886 SNX31Q8N9S9 440 aa18.22■□□□□ 0.51
SNX17-206ENST00000484886 MFSD9Q8NBP5 474 aa18.22■□□□□ 0.51
SNX17-206ENST00000484886 CAMKVQ8NCB2 501 aa18.22■□□□□ 0.51
SNX17-206ENST00000484886 ZCCHC10Q8TBK6 192 aa18.22■□□□□ 0.51
SNX17-206ENST00000484886 SLC13A3Q8WWT9 602 aa18.22■□□□□ 0.51
SNX17-206ENST00000484886 NXNL1Q96CM4 212 aa18.22■□□□□ 0.51
SNX17-206ENST00000484886 AIF1LQ9BQI0 150 aa18.22■□□□□ 0.51
SNX17-206ENST00000484886 SOX17Q9H6I2 414 aaPredicted RBP18.22■□□□□ 0.51
SNX17-206ENST00000484886 PELI2Q9HAT8 420 aa18.22■□□□□ 0.51
SNX17-206ENST00000484886 GEMIN8Q9NWZ8 242 aaKnown RBP18.22■□□□□ 0.51
SNX17-206ENST00000484886 NXT1Q9UKK6 140 aaKnown RBP18.22■□□□□ 0.51
SNX17-206ENST00000484886 PIEZO2Q9H5I5 2752 aa18.22■□□□□ 0.51
SNX17-206ENST00000484886 ATRXP46100 2492 aa18.22■□□□□ 0.51
SNX17-206ENST00000484886 CCDC88CQ9P219 2028 aa18.22■□□□□ 0.51
SNX17-206ENST00000484886 A0A0A6YYC8 382 aaPredicted RBP18.21■□□□□ 0.51
SNX17-206ENST00000484886 TRBC2A0A5B9 178 aa18.21■□□□□ 0.51
SNX17-206ENST00000484886 HMX2A2RU54 273 aa18.21■□□□□ 0.51
SNX17-206ENST00000484886 I3L1I5 382 aaPredicted RBP18.21■□□□□ 0.51
SNX17-206ENST00000484886 LCMT2O60294 686 aaKnown RBP18.21■□□□□ 0.51
SNX17-206ENST00000484886 IPO13O94829 963 aaKnown RBP18.21■□□□□ 0.51
SNX17-206ENST00000484886 ALBP02768 609 aa18.21■□□□□ 0.51
SNX17-206ENST00000484886 SLC35G6P0C7Q6 338 aa18.21■□□□□ 0.51
SNX17-206ENST00000484886 AVPR1BP47901 424 aa18.21■□□□□ 0.51
SNX17-206ENST00000484886 GLRBP48167 497 aa18.21■□□□□ 0.51
SNX17-206ENST00000484886 HSPA7P48741 367 aa18.21■□□□□ 0.51
SNX17-206ENST00000484886 CHAF1BQ13112 559 aa18.21■□□□□ 0.51
SNX17-206ENST00000484886 ATP1A4Q13733 1029 aa18.21■□□□□ 0.51
SNX17-206ENST00000484886 SSPNQ14714 243 aa18.21■□□□□ 0.51
SNX17-206ENST00000484886 RBBP5Q15291 538 aaKnown RBP18.21■□□□□ 0.51
SNX17-206ENST00000484886 NKG7Q16617 165 aa18.21■□□□□ 0.51
SNX17-206ENST00000484886 CPZQ66K79 652 aa18.21■□□□□ 0.51
SNX17-206ENST00000484886 NXPE4Q6UWF7 544 aa18.21■□□□□ 0.51
SNX17-206ENST00000484886 PRSS58Q8IYP2 241 aa18.21■□□□□ 0.51
SNX17-206ENST00000484886 ADAMTS17Q8TE56 1095 aa18.21■□□□□ 0.51
SNX17-206ENST00000484886 MVB12AQ96EY5 273 aa18.21■□□□□ 0.51
SNX17-206ENST00000484886 WDR54Q9H977 334 aa18.21■□□□□ 0.51
SNX17-206ENST00000484886 ACSS2Q9NR19 701 aa18.21■□□□□ 0.51
SNX17-206ENST00000484886 DNAJC11Q9NVH1 559 aa18.21■□□□□ 0.51
SNX17-206ENST00000484886 NUDT4Q9NZJ9 180 aa18.21■□□□□ 0.51
SNX17-206ENST00000484886 TRPC4Q9UBN4 977 aa18.21■□□□□ 0.51
SNX17-206ENST00000484886 ZNF282Q9UDV7 671 aaPredicted RBP18.21■□□□□ 0.51
SNX17-206ENST00000484886 ATMQ13315 3056 aa18.2■□□□□ 0.5
SNX17-206ENST00000484886 MKRN2OSH3BPM6 223 aa18.2■□□□□ 0.5
SNX17-206ENST00000484886 PEX12O00623 359 aa18.2■□□□□ 0.5
SNX17-206ENST00000484886 FFAR3O14843 346 aa18.2■□□□□ 0.5
SNX17-206ENST00000484886 GPR42O15529 346 aa18.2■□□□□ 0.5
SNX17-206ENST00000484886 NDUFS4O43181 175 aa18.2■□□□□ 0.5
SNX17-206ENST00000484886 CCNT2O60583 730 aaKnown RBP18.2■□□□□ 0.5
SNX17-206ENST00000484886 KERAO60938 352 aa18.2■□□□□ 0.5
SNX17-206ENST00000484886 H2AFYO75367 372 aaKnown RBP18.2■□□□□ 0.5
SNX17-206ENST00000484886 STK16O75716 305 aa18.2■□□□□ 0.5
SNX17-206ENST00000484886 ALDOAP04075 364 aaKnown RBP18.2■□□□□ 0.5
SNX17-206ENST00000484886 ABHD2P08910 425 aa18.2■□□□□ 0.5
SNX17-206ENST00000484886 GNAZP19086 355 aa18.2■□□□□ 0.5
SNX17-206ENST00000484886 SLC6A12P48065 614 aa18.2■□□□□ 0.5
SNX17-206ENST00000484886 CDC16Q13042 620 aa18.2■□□□□ 0.5
SNX17-206ENST00000484886 CDKL4Q5MAI5 379 aa18.2■□□□□ 0.5
SNX17-206ENST00000484886 MRGPREQ86SM8 312 aa18.2■□□□□ 0.5
SNX17-206ENST00000484886 ISCA2Q86U28 154 aa18.2■□□□□ 0.5
SNX17-206ENST00000484886 CENPLQ8N0S6 344 aaPredicted RBP18.2■□□□□ 0.5
SNX17-206ENST00000484886 ZNF740Q8NDX6 193 aa18.2■□□□□ 0.5
SNX17-206ENST00000484886 OR4K1Q8NGD4 311 aa18.2■□□□□ 0.5
SNX17-206ENST00000484886 C9orf43Q8TAL5 461 aaPredicted RBP18.2■□□□□ 0.5
SNX17-206ENST00000484886 ESAMQ96AP7 390 aa18.2■□□□□ 0.5
SNX17-206ENST00000484886 MIEF2Q96C03 454 aa18.2■□□□□ 0.5
SNX17-206ENST00000484886 TMEM79Q9BSE2 394 aa18.2■□□□□ 0.5
SNX17-206ENST00000484886 PRM3Q9NNZ6 103 aa18.2■□□□□ 0.5
SNX17-206ENST00000484886 MRPS2Q9Y399 296 aaKnown RBP18.2■□□□□ 0.5
SNX17-206ENST00000484886 SYCE1LA8MT33 242 aa18.19■□□□□ 0.5
SNX17-206ENST00000484886 TRIM49D1C9J1S8 452 aa18.19■□□□□ 0.5
SNX17-206ENST00000484886 UBXN8O00124 270 aa18.19■□□□□ 0.5
SNX17-206ENST00000484886 CLGNO14967 610 aa18.19■□□□□ 0.5
SNX17-206ENST00000484886 TAPBPO15533 448 aa18.19■□□□□ 0.5
SNX17-206ENST00000484886 RIPK2O43353 540 aa18.19■□□□□ 0.5
SNX17-206ENST00000484886 DNAJB5O75953 348 aa18.19■□□□□ 0.5
SNX17-206ENST00000484886 KLHL2O95198 593 aa18.19■□□□□ 0.5
SNX17-206ENST00000484886 ONECUT2O95948 504 aa18.19■□□□□ 0.5
SNX17-206ENST00000484886 UMODP07911 640 aa18.19■□□□□ 0.5
SNX17-206ENST00000484886 CNTFP26441 200 aa18.19■□□□□ 0.5
SNX17-206ENST00000484886 VARSP26640 1264 aaKnown RBP18.19■□□□□ 0.5
SNX17-206ENST00000484886 KCNC1P48547 511 aa18.19■□□□□ 0.5
SNX17-206ENST00000484886 RRADP55042 308 aa18.19■□□□□ 0.5
SNX17-206ENST00000484886 REEP5Q00765 189 aa18.19■□□□□ 0.5
SNX17-206ENST00000484886 RGS1Q08116 209 aa18.19■□□□□ 0.5
SNX17-206ENST00000484886 C19orf57Q0VDD7 668 aa18.19■□□□□ 0.5
SNX17-206ENST00000484886 NFATC3Q12968 1075 aa18.19■□□□□ 0.5
SNX17-206ENST00000484886 DSG2Q14126 1118 aa18.19■□□□□ 0.5
SNX17-206ENST00000484886 FAM53BQ14153 422 aa18.19■□□□□ 0.5
SNX17-206ENST00000484886 KCT2Q8NC54 265 aa18.19■□□□□ 0.5
SNX17-206ENST00000484886 PDPRQ8NCN5 879 aa18.19■□□□□ 0.5
SNX17-206ENST00000484886 OR9A4Q8NGU2 314 aa18.19■□□□□ 0.5
SNX17-206ENST00000484886 DCAKDQ8WVC6 231 aa18.19■□□□□ 0.5
SNX17-206ENST00000484886 IP6K3Q96PC2 410 aa18.19■□□□□ 0.5
SNX17-206ENST00000484886 CAPS2Q9BXY5 557 aa18.19■□□□□ 0.5
SNX17-206ENST00000484886 ING2Q9H160 280 aa18.19■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms