RNA–Protein interactions for RNA: ENST00000483851.6

SHOX2-204, Transcript of short stature homeobox 2, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SHOX2, Length 1,866 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX2-204ENST00000483851 SYT12Q8IV01 421 aa25.21■■□□□ 1.63
SHOX2-204ENST00000483851 PHACTR4Q8IZ21 702 aa25.21■■□□□ 1.63
SHOX2-204ENST00000483851 KRTCAP2Q8N6L1 136 aa25.21■■□□□ 1.63
SHOX2-204ENST00000483851 BHLHE22Q8NFJ8 381 aaPredicted RBP25.21■■□□□ 1.63
SHOX2-204ENST00000483851 KLHDC7BQ96G42 594 aa25.21■■□□□ 1.63
SHOX2-204ENST00000483851 TSSK3Q96PN8 268 aa25.21■■□□□ 1.63
SHOX2-204ENST00000483851 SLC39A3Q9BRY0 314 aa25.21■■□□□ 1.63
SHOX2-204ENST00000483851 SPNS1Q9H2V7 528 aa25.21■■□□□ 1.63
SHOX2-204ENST00000483851 IL1RL2Q9HB29 575 aa25.21■■□□□ 1.63
SHOX2-204ENST00000483851 PRSS51A0A1B0GVH4 220 aa25.21■■□□□ 1.63
SHOX2-204ENST00000483851 EIF4E1BA6NMX2 242 aaKnown RBP25.21■■□□□ 1.63
SHOX2-204ENST00000483851 KCNH1O95259 989 aa25.21■■□□□ 1.63
SHOX2-204ENST00000483851 TACR1P25103 407 aa25.21■■□□□ 1.63
SHOX2-204ENST00000483851 CD27P26842 260 aa25.21■■□□□ 1.63
SHOX2-204ENST00000483851 DGKQP52824 942 aa25.21■■□□□ 1.63
SHOX2-204ENST00000483851 SRSF11Q05519 484 aaKnown RBP25.21■■□□□ 1.63
SHOX2-204ENST00000483851 SPANXN4Q5MJ08 99 aa25.21■■□□□ 1.63
SHOX2-204ENST00000483851 ADNP2Q6IQ32 1131 aa25.21■■□□□ 1.63
SHOX2-204ENST00000483851 SLC2A7Q6PXP3 512 aa25.21■■□□□ 1.63
SHOX2-204ENST00000483851 DLEU7Q6UYE1 221 aa25.21■■□□□ 1.63
SHOX2-204ENST00000483851 NRROSQ86YC3 692 aa25.21■■□□□ 1.63
SHOX2-204ENST00000483851 C1orf52Q8N6N3 182 aaKnown RBP25.21■■□□□ 1.63
SHOX2-204ENST00000483851 RMND5AQ9H871 391 aa25.21■■□□□ 1.63
SHOX2-204ENST00000483851 ZNF624Q9P2J8 865 aaPredicted RBP25.21■■□□□ 1.63
SHOX2-204ENST00000483851 NME4O00746 187 aa25.2■■□□□ 1.62
SHOX2-204ENST00000483851 DNAJA2O60884 412 aa25.2■■□□□ 1.62
SHOX2-204ENST00000483851 GSTM2P28161 218 aa25.2■■□□□ 1.62
SHOX2-204ENST00000483851 TIA1P31483 386 aaKnown RBP eCLIP25.2■■□□□ 1.62
SHOX2-204ENST00000483851 S100A3P33764 101 aa25.2■■□□□ 1.62
SHOX2-204ENST00000483851 EEFSECP57772 596 aaKnown RBP25.2■■□□□ 1.62
SHOX2-204ENST00000483851 MRPS22P82650 360 aaKnown RBP25.2■■□□□ 1.62
SHOX2-204ENST00000483851 BNIP2Q12982 314 aa25.2■■□□□ 1.62
SHOX2-204ENST00000483851 TRIP10Q15642 601 aa25.2■■□□□ 1.62
SHOX2-204ENST00000483851 SLC30A9Q6PML9 568 aa25.2■■□□□ 1.62
SHOX2-204ENST00000483851 RLN3Q8WXF3 142 aa25.2■■□□□ 1.62
SHOX2-204ENST00000483851 GTF2H4Q92759 462 aa25.2■■□□□ 1.62
SHOX2-204ENST00000483851 TMEM125Q96AQ2 219 aa25.2■■□□□ 1.62
SHOX2-204ENST00000483851 CXorf40BQ96DE9 158 aa25.2■■□□□ 1.62
SHOX2-204ENST00000483851 MUC13Q9H3R2 512 aa25.2■■□□□ 1.62
SHOX2-204ENST00000483851 RIMS3Q9UJD0 308 aa25.2■■□□□ 1.62
SHOX2-204ENST00000483851 ANKDD1BA6NHY2 528 aa25.19■■□□□ 1.62
SHOX2-204ENST00000483851 OR5K4A6NMS3 321 aa25.19■■□□□ 1.62
SHOX2-204ENST00000483851 SCAMP1O15126 338 aa25.19■■□□□ 1.62
SHOX2-204ENST00000483851 SEMA3DO95025 777 aa25.19■■□□□ 1.62
SHOX2-204ENST00000483851 MEF2AQ02078 507 aaPredicted RBP25.19■■□□□ 1.62
SHOX2-204ENST00000483851 MTAPQ13126 283 aa25.19■■□□□ 1.62
SHOX2-204ENST00000483851 EIF2B5Q13144 721 aaKnown RBP25.19■■□□□ 1.62
SHOX2-204ENST00000483851 FZD2Q14332 565 aa25.19■■□□□ 1.62
SHOX2-204ENST00000483851 IQCHQ86VS3 1027 aa25.19■■□□□ 1.62
SHOX2-204ENST00000483851 MFSD2AQ8NA29 543 aa25.19■■□□□ 1.62
SHOX2-204ENST00000483851 TTLQ8NG68 377 aa25.19■■□□□ 1.62
SHOX2-204ENST00000483851 CCL4L1Q8NHW4 92 aa25.19■■□□□ 1.62
SHOX2-204ENST00000483851 OR52E6Q96RD3 313 aa25.19■■□□□ 1.62
SHOX2-204ENST00000483851 CUEDC1Q9NWM3 386 aaPredicted RBP25.19■■□□□ 1.62
SHOX2-204ENST00000483851 CMTM6Q9NX76 183 aa25.19■■□□□ 1.62
SHOX2-204ENST00000483851 AHSPQ9NZD4 102 aa25.19■■□□□ 1.62
SHOX2-204ENST00000483851 MAN2B2Q9Y2E5 1009 aa25.19■■□□□ 1.62
SHOX2-204ENST00000483851 AP3M1Q9Y2T2 418 aa25.19■■□□□ 1.62
SHOX2-204ENST00000483851 MAGEA13PA6NCF6 341 aa25.19■■□□□ 1.62
SHOX2-204ENST00000483851 EML2O95834 649 aa25.19■■□□□ 1.62
SHOX2-204ENST00000483851 RAE1P78406 368 aaKnown RBP25.19■■□□□ 1.62
SHOX2-204ENST00000483851 CAPRIN1Q14444 709 aaKnown RBP25.19■■□□□ 1.62
SHOX2-204ENST00000483851 NANOGP8Q6NSW7 305 aa25.19■■□□□ 1.62
SHOX2-204ENST00000483851 TMEM154Q6P9G4 183 aa25.19■■□□□ 1.62
SHOX2-204ENST00000483851 AMIGO1Q86WK6 493 aa25.19■■□□□ 1.62
SHOX2-204ENST00000483851 KIAA2013Q8IYS2 634 aa25.19■■□□□ 1.62
SHOX2-204ENST00000483851 METTL4Q8N3J2 472 aa25.19■■□□□ 1.62
SHOX2-204ENST00000483851 ZNF740Q8NDX6 193 aa25.19■■□□□ 1.62
SHOX2-204ENST00000483851 OR8J3Q8NGG0 315 aa25.19■■□□□ 1.62
SHOX2-204ENST00000483851 CLHC1Q8NHS4 586 aa25.19■■□□□ 1.62
SHOX2-204ENST00000483851 LCN9Q8WX39 176 aa25.19■■□□□ 1.62
SHOX2-204ENST00000483851 CGREF1Q99674 301 aa25.19■■□□□ 1.62
SHOX2-204ENST00000483851 TWSG1Q9GZX9 223 aa25.19■■□□□ 1.62
SHOX2-204ENST00000483851 XKR8Q9H6D3 395 aa25.19■■□□□ 1.62
SHOX2-204ENST00000483851 NANOGQ9H9S0 305 aa25.19■■□□□ 1.62
SHOX2-204ENST00000483851 PRM3Q9NNZ6 103 aa25.19■■□□□ 1.62
SHOX2-204ENST00000483851 TMEM184CQ9NVA4 438 aa25.19■■□□□ 1.62
SHOX2-204ENST00000483851 PLXND1Q9Y4D7 1925 aa25.19■■□□□ 1.62
SHOX2-204ENST00000483851 ERN1O75460 977 aaKnown RBP25.18■■□□□ 1.62
SHOX2-204ENST00000483851 STAMBPO95630 424 aa25.18■■□□□ 1.62
SHOX2-204ENST00000483851 ANXA4P09525 319 aaPredicted RBP25.18■■□□□ 1.62
SHOX2-204ENST00000483851 PSMB5P28074 263 aa25.18■■□□□ 1.62
SHOX2-204ENST00000483851 SLC19A1P41440 591 aa25.18■■□□□ 1.62
SHOX2-204ENST00000483851 RBBP5Q15291 538 aaKnown RBP25.18■■□□□ 1.62
SHOX2-204ENST00000483851 LRRC36Q1X8D7 754 aa25.18■■□□□ 1.62
SHOX2-204ENST00000483851 PARGQ86W56 976 aa25.18■■□□□ 1.62
SHOX2-204ENST00000483851 TICAM1Q8IUC6 712 aa25.18■■□□□ 1.62
SHOX2-204ENST00000483851 FAM160A2Q8N612 972 aaPredicted RBP25.18■■□□□ 1.62
SHOX2-204ENST00000483851 FRMD1Q8N878 549 aa25.18■■□□□ 1.62
SHOX2-204ENST00000483851 FAM156AQ8NDB6 213 aa25.18■■□□□ 1.62
SHOX2-204ENST00000483851 SNX19Q92543 992 aa25.18■■□□□ 1.62
SHOX2-204ENST00000483851 SLC22A18Q96BI1 424 aa25.18■■□□□ 1.62
SHOX2-204ENST00000483851 KCNH6Q9H252 994 aa25.18■■□□□ 1.62
SHOX2-204ENST00000483851 DPPA5A6NC42 116 aa25.17■■□□□ 1.62
SHOX2-204ENST00000483851 H7BY64 318 aa25.17■■□□□ 1.62
SHOX2-204ENST00000483851 C8BP07358 591 aa25.17■■□□□ 1.62
SHOX2-204ENST00000483851 AQP4P55087 323 aa25.17■■□□□ 1.62
SHOX2-204ENST00000483851 CSNK1G2P78368 415 aa25.17■■□□□ 1.62
SHOX2-204ENST00000483851 IYDQ6PHW0 289 aa25.17■■□□□ 1.62
SHOX2-204ENST00000483851 VN1R5Q7Z5H4 357 aa25.17■■□□□ 1.62
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms