RNA–Protein interactions for RNA: ENST00000481999.1

CHD3-211, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 2

Gene CHD3, Length 2,515 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-211ENST00000481999 ALDH3A2P51648 485 aa13.93□□□□□ -0.18
CHD3-211ENST00000481999 ARSFP54793 590 aa13.93□□□□□ -0.18
CHD3-211ENST00000481999 TAP2Q03519 686 aa13.93□□□□□ -0.18
CHD3-211ENST00000481999 SLC14A1Q13336 389 aa13.93□□□□□ -0.18
CHD3-211ENST00000481999 ENPP2Q13822 863 aa13.93□□□□□ -0.18
CHD3-211ENST00000481999 MAPKAPK3Q16644 382 aa13.93□□□□□ -0.18
CHD3-211ENST00000481999 GGTA1PQ4G0N0 100 aa13.93□□□□□ -0.18
CHD3-211ENST00000481999 METTL2BQ6P1Q9 378 aaKnown RBP13.93□□□□□ -0.18
CHD3-211ENST00000481999 RNF165Q6ZSG1 346 aa13.93□□□□□ -0.18
CHD3-211ENST00000481999 HOMEZQ8IX15 550 aa13.93□□□□□ -0.18
CHD3-211ENST00000481999 DRAXINQ8NBI3 349 aaPredicted RBP13.93□□□□□ -0.18
CHD3-211ENST00000481999 GLB1L3Q8NCI6 653 aaPredicted RBP13.93□□□□□ -0.18
CHD3-211ENST00000481999 OR2L2Q8NH16 312 aa13.93□□□□□ -0.18
CHD3-211ENST00000481999 OR56A3Q8NH54 315 aa13.93□□□□□ -0.18
CHD3-211ENST00000481999 HUS1BQ8NHY5 278 aa13.93□□□□□ -0.18
CHD3-211ENST00000481999 C12orf43Q96C57 262 aaKnown RBP13.93□□□□□ -0.18
CHD3-211ENST00000481999 OR52A5Q9H2C5 316 aa13.93□□□□□ -0.18
CHD3-211ENST00000481999 OSGEPL1Q9H4B0 414 aa13.93□□□□□ -0.18
CHD3-211ENST00000481999 NTN4Q9HB63 628 aa13.93□□□□□ -0.18
CHD3-211ENST00000481999 MOSPD1Q9UJG1 213 aa13.93□□□□□ -0.18
CHD3-211ENST00000481999 BTBD3Q9Y2F9 522 aa13.93□□□□□ -0.18
CHD3-211ENST00000481999 PCDHGA11Q9Y5H2 935 aa13.93□□□□□ -0.18
CHD3-211ENST00000481999 SDK1Q7Z5N4 2213 aa13.93□□□□□ -0.18
CHD3-211ENST00000481999 A0A1W2PQF6 199 aa13.93□□□□□ -0.18
CHD3-211ENST00000481999 ACP5P13686 325 aa13.93□□□□□ -0.18
CHD3-211ENST00000481999 PPP2CBP62714 309 aa13.93□□□□□ -0.18
CHD3-211ENST00000481999 PPP2CAP67775 309 aa13.93□□□□□ -0.18
CHD3-211ENST00000481999 OTUD3Q5T2D3 398 aaPredicted RBP13.93□□□□□ -0.18
CHD3-211ENST00000481999 FAM46CQ5VWP2 391 aa13.93□□□□□ -0.18
CHD3-211ENST00000481999 TMEM214Q6NUQ4 689 aaKnown RBP13.93□□□□□ -0.18
CHD3-211ENST00000481999 NOXRED1Q6NXP6 359 aa13.93□□□□□ -0.18
CHD3-211ENST00000481999 FAM180BQ6P0A1 224 aa13.93□□□□□ -0.18
CHD3-211ENST00000481999 TBPL2Q6SJ96 375 aa13.93□□□□□ -0.18
CHD3-211ENST00000481999 ZNF765Q7L2R6 523 aa13.93□□□□□ -0.18
CHD3-211ENST00000481999 OR2T12Q8NG77 320 aa13.93□□□□□ -0.18
CHD3-211ENST00000481999 OR7G3Q8NG95 312 aa13.93□□□□□ -0.18
CHD3-211ENST00000481999 OR10A6Q8NH74 314 aa13.93□□□□□ -0.18
CHD3-211ENST00000481999 ZNF583Q96ND8 569 aa13.93□□□□□ -0.18
CHD3-211ENST00000481999 UGT2B28Q9BY64 529 aa13.93□□□□□ -0.18
CHD3-211ENST00000481999 ZCCHC2Q9C0B9 1178 aaKnown RBP13.93□□□□□ -0.18
CHD3-211ENST00000481999 GORASP2Q9H8Y8 452 aa13.93□□□□□ -0.18
CHD3-211ENST00000481999 POLR1BQ9H9Y6 1135 aa13.93□□□□□ -0.18
CHD3-211ENST00000481999 EBF1Q9UH73 591 aa13.93□□□□□ -0.18
CHD3-211ENST00000481999 KCNK6Q9Y257 313 aa13.93□□□□□ -0.18
CHD3-211ENST00000481999 MGAT4DA6NG13 374 aa13.92□□□□□ -0.18
CHD3-211ENST00000481999 H0Y8X5 98 aa13.92□□□□□ -0.18
CHD3-211ENST00000481999 YY2O15391 372 aa13.92□□□□□ -0.18
CHD3-211ENST00000481999 ASGR2P07307 311 aa13.92□□□□□ -0.18
CHD3-211ENST00000481999 EIF2DP41214 584 aaKnown RBP13.92□□□□□ -0.18
CHD3-211ENST00000481999 HLCSP50747 726 aa13.92□□□□□ -0.18
CHD3-211ENST00000481999 HTR4Q13639 388 aa13.92□□□□□ -0.18
CHD3-211ENST00000481999 DAG1Q14118 895 aa13.92□□□□□ -0.18
CHD3-211ENST00000481999 OR4F3Q6IEY1 312 aa13.92□□□□□ -0.18
CHD3-211ENST00000481999 AMZ2Q86W34 360 aa13.92□□□□□ -0.18
CHD3-211ENST00000481999 FAM20CQ8IXL6 584 aa13.92□□□□□ -0.18
CHD3-211ENST00000481999 CLEC4FQ8N1N0 589 aa13.92□□□□□ -0.18
CHD3-211ENST00000481999 FAM86B1Q8N7N1 296 aa13.92□□□□□ -0.18
CHD3-211ENST00000481999 OR10Q1Q8NGQ4 319 aa13.92□□□□□ -0.18
CHD3-211ENST00000481999 A0A1W2PQU0 124 aa13.92□□□□□ -0.18
CHD3-211ENST00000481999 UPK1AO00322 258 aa13.92□□□□□ -0.18
CHD3-211ENST00000481999 GSTA4O15217 222 aa13.92□□□□□ -0.18
CHD3-211ENST00000481999 KLF8O95600 359 aaPredicted RBP13.92□□□□□ -0.18
CHD3-211ENST00000481999 HPRP00739 348 aa13.92□□□□□ -0.18
CHD3-211ENST00000481999 EMP3P54852 163 aa13.92□□□□□ -0.18
CHD3-211ENST00000481999 RPS13P62277 151 aaKnown RBP13.92□□□□□ -0.18
CHD3-211ENST00000481999 PMS2P3Q13401 168 aa13.92□□□□□ -0.18
CHD3-211ENST00000481999 SLCO4C1Q6ZQN7 724 aa13.92□□□□□ -0.18
CHD3-211ENST00000481999 FKBP9P1Q75LS8 142 aa13.92□□□□□ -0.18
CHD3-211ENST00000481999 LZICQ8WZA0 190 aa13.92□□□□□ -0.18
CHD3-211ENST00000481999 TMBIM1Q969X1 311 aa13.92□□□□□ -0.18
CHD3-211ENST00000481999 SH3GL1Q99961 368 aa13.92□□□□□ -0.18
CHD3-211ENST00000481999 THUMPD3Q9BV44 507 aaKnown RBP13.92□□□□□ -0.18
CHD3-211ENST00000481999 EPHX3Q9H6B9 360 aa13.92□□□□□ -0.18
CHD3-211ENST00000481999 SOX17Q9H6I2 414 aaPredicted RBP13.92□□□□□ -0.18
CHD3-211ENST00000481999 SERHLQ9NQF3 203 aa13.92□□□□□ -0.18
CHD3-211ENST00000481999 NIPSNAP3AQ9UFN0 247 aaPredicted RBP13.92□□□□□ -0.18
CHD3-211ENST00000481999 CDC14AQ9UNH5 594 aa13.92□□□□□ -0.18
CHD3-211ENST00000481999 PCDHB14Q9Y5E9 798 aa13.92□□□□□ -0.18
CHD3-211ENST00000481999 SNRNP200O75643 2136 aaKnown RBP13.92□□□□□ -0.18
CHD3-211ENST00000481999 TGFB1P01137 390 aa13.91□□□□□ -0.18
CHD3-211ENST00000481999 ALPLP05186 524 aa13.91□□□□□ -0.18
CHD3-211ENST00000481999 IL6P05231 212 aa13.91□□□□□ -0.18
CHD3-211ENST00000481999 HOXB2P14652 356 aa13.91□□□□□ -0.18
CHD3-211ENST00000481999 IGFBP4P22692 258 aa13.91□□□□□ -0.18
CHD3-211ENST00000481999 DCKP27707 260 aa13.91□□□□□ -0.18
CHD3-211ENST00000481999 CLCNKAP51800 687 aa13.91□□□□□ -0.18
CHD3-211ENST00000481999 CLDN2P57739 230 aa13.91□□□□□ -0.18
CHD3-211ENST00000481999 RAB39AQ14964 217 aa13.91□□□□□ -0.18
CHD3-211ENST00000481999 PLCL1Q15111 1095 aa13.91□□□□□ -0.18
CHD3-211ENST00000481999 Q7L0L9 218 aa13.91□□□□□ -0.18
CHD3-211ENST00000481999 LRRC56Q8IYG6 542 aaPredicted RBP13.91□□□□□ -0.18
CHD3-211ENST00000481999 C1orf52Q8N6N3 182 aaKnown RBP13.91□□□□□ -0.18
CHD3-211ENST00000481999 OR9A1PQ8NGU1 263 aa13.91□□□□□ -0.18
CHD3-211ENST00000481999 CSGALNACT1Q8TDX6 532 aa13.91□□□□□ -0.18
CHD3-211ENST00000481999 RAB7BQ96AH8 199 aa13.91□□□□□ -0.18
CHD3-211ENST00000481999 SDCCAG3Q96C92 435 aa13.91□□□□□ -0.18
CHD3-211ENST00000481999 RDH12Q96NR8 316 aa13.91□□□□□ -0.18
CHD3-211ENST00000481999 TUBA1CQ9BQE3 449 aa13.91□□□□□ -0.18
CHD3-211ENST00000481999 WDR26Q9H7D7 661 aa13.91□□□□□ -0.18
CHD3-211ENST00000481999 ASIC5Q9NY37 505 aa13.91□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms