RNA–Protein interactions for RNA: ENST00000477520.1

PTCD3-212, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 4

Gene PTCD3, Length 556 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-212ENST00000477520 PIGUQ9H490 435 aa4.57□□□□□ -1.68
PTCD3-212ENST00000477520 WDR26Q9H7D7 661 aa4.57□□□□□ -1.68
PTCD3-212ENST00000477520 MEAF6Q9HAF1 191 aa4.57□□□□□ -1.68
PTCD3-212ENST00000477520 NMRAL1Q9HBL8 299 aa4.57□□□□□ -1.68
PTCD3-212ENST00000477520 VAT1LQ9HCJ6 419 aa4.57□□□□□ -1.68
PTCD3-212ENST00000477520 XPNPEP3Q9NQH7 507 aa4.57□□□□□ -1.68
PTCD3-212ENST00000477520 BIN3Q9NQY0 253 aa4.57□□□□□ -1.68
PTCD3-212ENST00000477520 SDHAF3Q9NRP4 125 aa4.57□□□□□ -1.68
PTCD3-212ENST00000477520 KCNH7Q9NS40 1196 aa4.57□□□□□ -1.68
PTCD3-212ENST00000477520 OLA1Q9NTK5 396 aaKnown RBP4.57□□□□□ -1.68
PTCD3-212ENST00000477520 FAM49BQ9NUQ9 324 aa4.57□□□□□ -1.68
PTCD3-212ENST00000477520 MCUBQ9NWR8 336 aa4.57□□□□□ -1.68
PTCD3-212ENST00000477520 KCTD5Q9NXV2 234 aa4.57□□□□□ -1.68
PTCD3-212ENST00000477520 GPRC5BQ9NZH0 403 aa4.57□□□□□ -1.68
PTCD3-212ENST00000477520 ZNF224Q9NZL3 707 aa4.57□□□□□ -1.68
PTCD3-212ENST00000477520 FTSJ1Q9UET6 329 aa4.57□□□□□ -1.68
PTCD3-212ENST00000477520 NDRG3Q9UGV2 375 aa4.57□□□□□ -1.68
PTCD3-212ENST00000477520 CYB5R1Q9UHQ9 305 aa4.57□□□□□ -1.68
PTCD3-212ENST00000477520 ADAM29Q9UKF5 820 aa4.57□□□□□ -1.68
PTCD3-212ENST00000477520 CDH9Q9ULB4 789 aa4.57□□□□□ -1.68
PTCD3-212ENST00000477520 RIMKLBQ9ULI2 386 aa4.57□□□□□ -1.68
PTCD3-212ENST00000477520 ZFR2Q9UPR6 939 aaKnown RBP4.57□□□□□ -1.68
PTCD3-212ENST00000477520 DTX4Q9Y2E6 619 aa4.57□□□□□ -1.68
PTCD3-212ENST00000477520 LOXHD1Q8IVV2 1947 aa4.56□□□□□ -1.68
PTCD3-212ENST00000477520 TRAV6A0A075B6T7 132 aa4.56□□□□□ -1.68
PTCD3-212ENST00000477520 LOC100130705A0A1B0GUX0 176 aa4.56□□□□□ -1.68
PTCD3-212ENST00000477520 A0A1B0GVI7 797 aa4.56□□□□□ -1.68
PTCD3-212ENST00000477520 TCRBV5S2A0A599 114 aa4.56□□□□□ -1.68
PTCD3-212ENST00000477520 PCP4L1A6NKN8 68 aa4.56□□□□□ -1.68
PTCD3-212ENST00000477520 C3orf70A6NLC5 250 aaPredicted RBP4.56□□□□□ -1.68
PTCD3-212ENST00000477520 MPTX1A8MV57 137 aa4.56□□□□□ -1.68
PTCD3-212ENST00000477520 CXorf49A8MYA2 514 aaPredicted RBP4.56□□□□□ -1.68
PTCD3-212ENST00000477520 C2orf74A8MZ97 194 aa4.56□□□□□ -1.68
PTCD3-212ENST00000477520 HACD1B0YJ81 288 aa4.56□□□□□ -1.68
PTCD3-212ENST00000477520 NT5C1B-RDH14C9J2C7 533 aa4.56□□□□□ -1.68
PTCD3-212ENST00000477520 G3V2L1 256 aa4.56□□□□□ -1.68
PTCD3-212ENST00000477520 STX16-NPEPL1H3BU86 382 aa4.56□□□□□ -1.68
PTCD3-212ENST00000477520 H3BUI4 141 aa4.56□□□□□ -1.68
PTCD3-212ENST00000477520 H7C2Y5 167 aa4.56□□□□□ -1.68
PTCD3-212ENST00000477520 TOR1BO14657 336 aa4.56□□□□□ -1.68
PTCD3-212ENST00000477520 TPP1O14773 563 aa4.56□□□□□ -1.68
PTCD3-212ENST00000477520 HS6ST1O60243 411 aa4.56□□□□□ -1.68
PTCD3-212ENST00000477520 RAD1O60671 282 aa4.56□□□□□ -1.68
PTCD3-212ENST00000477520 ENDOD1O94919 500 aa4.56□□□□□ -1.68
PTCD3-212ENST00000477520 INMTO95050 263 aa4.56□□□□□ -1.68
PTCD3-212ENST00000477520 PAPSS2O95340 614 aaPredicted RBP4.56□□□□□ -1.68
PTCD3-212ENST00000477520 ANGPTL1O95841 491 aa4.56□□□□□ -1.68
PTCD3-212ENST00000477520 LGI1O95970 557 aa4.56□□□□□ -1.68
PTCD3-212ENST00000477520 LALBAP00709 142 aa4.56□□□□□ -1.68
PTCD3-212ENST00000477520 LRG1P02750 347 aa4.56□□□□□ -1.68
PTCD3-212ENST00000477520 RAF1P04049 648 aa4.56□□□□□ -1.68
PTCD3-212ENST00000477520 ALDOAP04075 364 aaKnown RBP4.56□□□□□ -1.68
PTCD3-212ENST00000477520 ICAM1P05362 532 aa4.56□□□□□ -1.68
PTCD3-212ENST00000477520 S100A9P06702 114 aaKnown RBP4.56□□□□□ -1.68
PTCD3-212ENST00000477520 POLBP06746 335 aa4.56□□□□□ -1.68
PTCD3-212ENST00000477520 PROS1P07225 676 aa4.56□□□□□ -1.68
PTCD3-212ENST00000477520 SMIM6P0DI80 62 aa4.56□□□□□ -1.68
PTCD3-212ENST00000477520 CSH1P0DML2 217 aa4.56□□□□□ -1.68
PTCD3-212ENST00000477520 CSH2P0DML3 217 aa4.56□□□□□ -1.68
PTCD3-212ENST00000477520 ADORA3P0DMS8 318 aa4.56□□□□□ -1.68
PTCD3-212ENST00000477520 ETS1P14921 441 aa4.56□□□□□ -1.68
PTCD3-212ENST00000477520 TCF3P15923 654 aa4.56□□□□□ -1.68
PTCD3-212ENST00000477520 CTPS1P17812 591 aa4.56□□□□□ -1.68
PTCD3-212ENST00000477520 MSH3P20585 1137 aa4.56□□□□□ -1.68
PTCD3-212ENST00000477520 ITGALP20701 1170 aa4.56□□□□□ -1.68
PTCD3-212ENST00000477520 S100PP25815 95 aa4.56□□□□□ -1.68
PTCD3-212ENST00000477520 IL1R2P27930 398 aa4.56□□□□□ -1.68
PTCD3-212ENST00000477520 ELK4P28324 431 aa4.56□□□□□ -1.68
PTCD3-212ENST00000477520 HNF1BP35680 557 aa4.56□□□□□ -1.68
PTCD3-212ENST00000477520 GJC1P36383 396 aa4.56□□□□□ -1.68
PTCD3-212ENST00000477520 NUP62P37198 522 aaPredicted RBP4.56□□□□□ -1.68
PTCD3-212ENST00000477520 GSTM5P46439 218 aa4.56□□□□□ -1.68
PTCD3-212ENST00000477520 SOX9P48436 509 aa4.56□□□□□ -1.68
PTCD3-212ENST00000477520 CCT3P49368 545 aaKnown RBP4.56□□□□□ -1.68
PTCD3-212ENST00000477520 ARHGDIAP52565 204 aa4.56□□□□□ -1.68
PTCD3-212ENST00000477520 SLC7A2P52569 658 aa4.56□□□□□ -1.68
PTCD3-212ENST00000477520 LIMK2P53671 638 aa4.56□□□□□ -1.68
PTCD3-212ENST00000477520 ISL1P61371 349 aa4.56□□□□□ -1.68
PTCD3-212ENST00000477520 PSMC5P62195 406 aa4.56□□□□□ -1.68
PTCD3-212ENST00000477520 YWHAEP62258 255 aaKnown RBP4.56□□□□□ -1.68
PTCD3-212ENST00000477520 GTF2BQ00403 316 aa4.56□□□□□ -1.68
PTCD3-212ENST00000477520 STX4Q12846 297 aa4.56□□□□□ -1.68
PTCD3-212ENST00000477520 SLC10A2Q12908 348 aaPredicted RBP4.56□□□□□ -1.68
PTCD3-212ENST00000477520 ABRQ12979 859 aa4.56□□□□□ -1.68
PTCD3-212ENST00000477520 MRPL58Q14197 206 aaKnown RBP4.56□□□□□ -1.68
PTCD3-212ENST00000477520 ZNF267Q14586 743 aaPredicted RBP4.56□□□□□ -1.68
PTCD3-212ENST00000477520 USP10Q14694 798 aaKnown RBP4.56□□□□□ -1.68
PTCD3-212ENST00000477520 EIF4HQ15056 248 aaKnown RBP4.56□□□□□ -1.68
PTCD3-212ENST00000477520 LTB4RQ15722 352 aa4.56□□□□□ -1.68
PTCD3-212ENST00000477520 DUSP6Q16828 381 aa4.56□□□□□ -1.68
PTCD3-212ENST00000477520 FAM110CQ1W6H9 321 aa4.56□□□□□ -1.68
PTCD3-212ENST00000477520 FUT11Q495W5 492 aa4.56□□□□□ -1.68
PTCD3-212ENST00000477520 BCL7AQ4VC05 210 aa4.56□□□□□ -1.68
PTCD3-212ENST00000477520 PAN2Q504Q3 1202 aaKnown RBP4.56□□□□□ -1.68
PTCD3-212ENST00000477520 AGKQ53H12 422 aa4.56□□□□□ -1.68
PTCD3-212ENST00000477520 BRDTQ58F21 947 aaPredicted RBP4.56□□□□□ -1.68
PTCD3-212ENST00000477520 PITRM1Q5JRX3 1037 aa4.56□□□□□ -1.68
PTCD3-212ENST00000477520 COLEC12Q5KU26 742 aa4.56□□□□□ -1.68
PTCD3-212ENST00000477520 ODR4Q5SWX8 454 aa4.56□□□□□ -1.68
PTCD3-212ENST00000477520 CATSPEREQ5SY80 951 aa4.56□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms