RNA–Protein interactions for RNA: ENST00000473494.6

SEC22A-204, Transcript of SEC22 homolog A, vesicle trafficking protein, humanhuman

TSL 3

Gene SEC22A, Length 1,011 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC22A-204ENST00000473494 NGFP01138 241 aa5.55□□□□□ -1.52
SEC22A-204ENST00000473494 IGLV2-11P01706 119 aa5.55□□□□□ -1.52
SEC22A-204ENST00000473494 PRSS1P07477 247 aa5.55□□□□□ -1.52
SEC22A-204ENST00000473494 ANOS1P23352 680 aa5.55□□□□□ -1.52
SEC22A-204ENST00000473494 DUTP33316 252 aaKnown RBP5.55□□□□□ -1.52
SEC22A-204ENST00000473494 SFTPDP35247 375 aa5.55□□□□□ -1.52
SEC22A-204ENST00000473494 CLDN17P56750 224 aa5.55□□□□□ -1.52
SEC22A-204ENST00000473494 LASP1Q14847 261 aaKnown RBP5.55□□□□□ -1.52
SEC22A-204ENST00000473494 OPCMLQ14982 345 aa5.55□□□□□ -1.52
SEC22A-204ENST00000473494 CCDC6Q16204 474 aa5.55□□□□□ -1.52
SEC22A-204ENST00000473494 TMEM270Q6UE05 265 aa5.55□□□□□ -1.52
SEC22A-204ENST00000473494 TRMT1LQ7Z2T5 733 aaKnown RBP5.55□□□□□ -1.52
SEC22A-204ENST00000473494 CPEB2Q7Z5Q1 589 aaKnown RBP5.55□□□□□ -1.52
SEC22A-204ENST00000473494 ANKRD46Q86W74 232 aa5.55□□□□□ -1.52
SEC22A-204ENST00000473494 DCUN1D3Q8IWE4 304 aa5.55□□□□□ -1.52
SEC22A-204ENST00000473494 AQP12AQ8IXF9 295 aa5.55□□□□□ -1.52
SEC22A-204ENST00000473494 KLHDC8AQ8IYD2 350 aa5.55□□□□□ -1.52
SEC22A-204ENST00000473494 TRIM58Q8NG06 486 aa5.55□□□□□ -1.52
SEC22A-204ENST00000473494 GIMAP5Q96F15 307 aa5.55□□□□□ -1.52
SEC22A-204ENST00000473494 PANX3Q96QZ0 392 aa5.55□□□□□ -1.52
SEC22A-204ENST00000473494 CDCA3Q99618 268 aaPredicted RBP5.55□□□□□ -1.52
SEC22A-204ENST00000473494 RIMS4Q9H426 269 aaPredicted RBP5.55□□□□□ -1.52
SEC22A-204ENST00000473494 RAB9BQ9NP90 201 aa5.55□□□□□ -1.52
SEC22A-204ENST00000473494 MID1IP1Q9NPA3 183 aa5.55□□□□□ -1.52
SEC22A-204ENST00000473494 SLC52A3Q9NQ40 469 aa5.55□□□□□ -1.52
SEC22A-204ENST00000473494 C2orf42Q9NWW7 574 aa5.55□□□□□ -1.52
SEC22A-204ENST00000473494 ZNF580Q9UK33 172 aa5.55□□□□□ -1.52
SEC22A-204ENST00000473494 FHAD1B1AJZ9 1412 aa5.55□□□□□ -1.52
SEC22A-204ENST00000473494 PFASO15067 1338 aa5.54□□□□□ -1.52
SEC22A-204ENST00000473494 TRAV18A0A075B6X5 111 aa5.54□□□□□ -1.52
SEC22A-204ENST00000473494 A0A0G2JLW4 131 aa5.54□□□□□ -1.52
SEC22A-204ENST00000473494 FAM72CH0Y354 149 aa5.54□□□□□ -1.52
SEC22A-204ENST00000473494 BLOC1S5-TXNDC5H3BN57 136 aa5.54□□□□□ -1.52
SEC22A-204ENST00000473494 DDX39AO00148 427 aaKnown RBP5.54□□□□□ -1.52
SEC22A-204ENST00000473494 SP9P0CG40 484 aa5.54□□□□□ -1.52
SEC22A-204ENST00000473494 VCLP18206 1134 aa5.54□□□□□ -1.52
SEC22A-204ENST00000473494 CYP2A7P20853 494 aa5.54□□□□□ -1.52
SEC22A-204ENST00000473494 LINC01547P58512 204 aaPredicted RBP5.54□□□□□ -1.52
SEC22A-204ENST00000473494 MYL7Q01449 175 aa5.54□□□□□ -1.52
SEC22A-204ENST00000473494 CDR2Q01850 454 aa5.54□□□□□ -1.52
SEC22A-204ENST00000473494 PPP2R5CQ13362 524 aa5.54□□□□□ -1.52
SEC22A-204ENST00000473494 CDC37Q16543 378 aaPredicted RBP5.54□□□□□ -1.52
SEC22A-204ENST00000473494 FAM72AQ5TYM5 149 aa5.54□□□□□ -1.52
SEC22A-204ENST00000473494 LCN1P1Q5VSP4 162 aa5.54□□□□□ -1.52
SEC22A-204ENST00000473494 FAM72DQ6L9T8 149 aa5.54□□□□□ -1.52
SEC22A-204ENST00000473494 SH2D5Q6ZV89 423 aa5.54□□□□□ -1.52
SEC22A-204ENST00000473494 PRUNE1Q86TP1 453 aa5.54□□□□□ -1.52
SEC22A-204ENST00000473494 FAM72BQ86X60 149 aa5.54□□□□□ -1.52
SEC22A-204ENST00000473494 CCDC83Q8IWF9 413 aa5.54□□□□□ -1.52
SEC22A-204ENST00000473494 PRSS35Q8N3Z0 413 aa5.54□□□□□ -1.52
SEC22A-204ENST00000473494 OR1L3Q8NH93 324 aa5.54□□□□□ -1.52
SEC22A-204ENST00000473494 UBLCP1Q8WVY7 318 aaPredicted RBP5.54□□□□□ -1.52
SEC22A-204ENST00000473494 KRT35Q92764 455 aa5.54□□□□□ -1.52
SEC22A-204ENST00000473494 RBM41Q96IZ5 413 aaKnown RBP5.54□□□□□ -1.52
SEC22A-204ENST00000473494 CCDC43Q96MW1 224 aaKnown RBP5.54□□□□□ -1.52
SEC22A-204ENST00000473494 BTBD9Q96Q07 612 aa5.54□□□□□ -1.52
SEC22A-204ENST00000473494 NODALQ96S42 347 aa5.54□□□□□ -1.52
SEC22A-204ENST00000473494 PITPNM3Q9BZ71 974 aa5.54□□□□□ -1.52
SEC22A-204ENST00000473494 MRPL17Q9NRX2 175 aaKnown RBP5.54□□□□□ -1.52
SEC22A-204ENST00000473494 ICAM5Q9UMF0 924 aa5.54□□□□□ -1.52
SEC22A-204ENST00000473494 AGTPBP1Q9UPW5 1226 aa5.54□□□□□ -1.52
SEC22A-204ENST00000473494 PMS2P5A8MQ11 134 aa5.53□□□□□ -1.52
SEC22A-204ENST00000473494 H0YIG0 161 aa5.53□□□□□ -1.52
SEC22A-204ENST00000473494 SCO2O43819 266 aa5.53□□□□□ -1.52
SEC22A-204ENST00000473494 RAD51DO75771 328 aa5.53□□□□□ -1.52
SEC22A-204ENST00000473494 CAVIN2O95810 425 aa5.53□□□□□ -1.52
SEC22A-204ENST00000473494 UMODP07911 640 aa5.53□□□□□ -1.52
SEC22A-204ENST00000473494 DLATP10515 647 aaKnown RBP5.53□□□□□ -1.52
SEC22A-204ENST00000473494 KRT3P12035 628 aa5.53□□□□□ -1.52
SEC22A-204ENST00000473494 SSTR1P30872 391 aa5.53□□□□□ -1.52
SEC22A-204ENST00000473494 CETN2P41208 172 aa5.53□□□□□ -1.52
SEC22A-204ENST00000473494 DNA2P51530 1060 aa5.53□□□□□ -1.52
SEC22A-204ENST00000473494 AKAP17AQ02040 695 aaKnown RBP5.53□□□□□ -1.52
SEC22A-204ENST00000473494 ACTN3Q08043 901 aaPredicted RBP5.53□□□□□ -1.52
SEC22A-204ENST00000473494 TEFQ10587 303 aa5.53□□□□□ -1.52
SEC22A-204ENST00000473494 HNRNPA0Q13151 305 aaKnown RBP5.53□□□□□ -1.52
SEC22A-204ENST00000473494 TRIM29Q14134 588 aa5.53□□□□□ -1.52
SEC22A-204ENST00000473494 EXT1Q16394 746 aa5.53□□□□□ -1.52
SEC22A-204ENST00000473494 GTDC1Q4AE62 458 aa5.53□□□□□ -1.52
SEC22A-204ENST00000473494 ARHGEF16Q5VV41 709 aa5.53□□□□□ -1.52
SEC22A-204ENST00000473494 TMEM207Q6UWW9 146 aa5.53□□□□□ -1.52
SEC22A-204ENST00000473494 CNBD1Q8NA66 436 aa5.53□□□□□ -1.52
SEC22A-204ENST00000473494 SLC37A3Q8NCC5 494 aa5.53□□□□□ -1.52
SEC22A-204ENST00000473494 PIGQQ9BRB3 760 aa5.53□□□□□ -1.52
SEC22A-204ENST00000473494 PI4K2AQ9BTU6 479 aa5.53□□□□□ -1.52
SEC22A-204ENST00000473494 RNF121Q9H920 327 aa5.53□□□□□ -1.52
SEC22A-204ENST00000473494 ZNF71Q9NQZ8 489 aaPredicted RBP5.53□□□□□ -1.52
SEC22A-204ENST00000473494 OR6C2Q9NZP2 312 aa5.53□□□□□ -1.52
SEC22A-204ENST00000473494 TRPC4Q9UBN4 977 aa5.53□□□□□ -1.52
SEC22A-204ENST00000473494 IL36AQ9UHA7 158 aa5.53□□□□□ -1.52
SEC22A-204ENST00000473494 PCDHGA1Q9Y5H4 931 aa5.53□□□□□ -1.52
SEC22A-204ENST00000473494 SHROOM2Q13796 1616 aa5.52□□□□□ -1.53
SEC22A-204ENST00000473494 STK36Q9NRP7 1315 aa5.52□□□□□ -1.53
SEC22A-204ENST00000473494 A0A0A6YYC8 382 aaPredicted RBP5.52□□□□□ -1.53
SEC22A-204ENST00000473494 FAM149AA5PLN7 773 aa5.52□□□□□ -1.53
SEC22A-204ENST00000473494 I3L1I5 382 aaPredicted RBP5.52□□□□□ -1.53
SEC22A-204ENST00000473494 PCDH7O60245 1069 aa5.52□□□□□ -1.53
SEC22A-204ENST00000473494 YES1P07947 543 aa5.52□□□□□ -1.53
SEC22A-204ENST00000473494 FAM157CP0CG43 387 aa5.52□□□□□ -1.53
SEC22A-204ENST00000473494 ALDH1B1P30837 517 aa5.52□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms