RNA–Protein interactions for RNA: ENST00000472679.1

CLK1-209, Transcript of CDC like kinase 1, humanhuman

TSL 2

Gene CLK1, Length 461 nt, Biotype retained intron, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-209ENST00000472679 OR1D5P58170 312 aa4.8□□□□□ -1.64
CLK1-209ENST00000472679 DCDC1P59894 354 aa4.8□□□□□ -1.64
CLK1-209ENST00000472679 FAM133BQ5BKY9 247 aaKnown RBP4.8□□□□□ -1.64
CLK1-209ENST00000472679 SPECC1Q5M775 1068 aa4.8□□□□□ -1.64
CLK1-209ENST00000472679 LCE1FQ5T754 118 aa4.8□□□□□ -1.64
CLK1-209ENST00000472679 WLSQ5T9L3 541 aa4.8□□□□□ -1.64
CLK1-209ENST00000472679 TXNRD3NBQ6F5E7 133 aa4.8□□□□□ -1.64
CLK1-209ENST00000472679 C5orf24Q7Z6I8 188 aa4.8□□□□□ -1.64
CLK1-209ENST00000472679 TIGD4Q8IY51 512 aa4.8□□□□□ -1.64
CLK1-209ENST00000472679 GPC2Q8N158 579 aa4.8□□□□□ -1.64
CLK1-209ENST00000472679 NEDD4LQ96PU5 975 aa4.8□□□□□ -1.64
CLK1-209ENST00000472679 USP28Q96RU2 1077 aa4.8□□□□□ -1.64
CLK1-209ENST00000472679 CDK19Q9BWU1 502 aa4.8□□□□□ -1.64
CLK1-209ENST00000472679 TDRD1Q9BXT4 1180 aaKnown RBP4.8□□□□□ -1.64
CLK1-209ENST00000472679 FGFBP2Q9BYJ0 223 aa4.8□□□□□ -1.64
CLK1-209ENST00000472679 RNF121Q9H920 327 aa4.8□□□□□ -1.64
CLK1-209ENST00000472679 TBC1D13Q9NVG8 400 aa4.8□□□□□ -1.64
CLK1-209ENST00000472679 ELF5Q9UKW6 265 aaPredicted RBP4.8□□□□□ -1.64
CLK1-209ENST00000472679 KLK4Q9Y5K2 254 aa4.8□□□□□ -1.64
CLK1-209ENST00000472679 CSNK1G3Q9Y6M4 447 aa4.8□□□□□ -1.64
CLK1-209ENST00000472679 H7C423 109 aa4.79□□□□□ -1.64
CLK1-209ENST00000472679 FLRT2O43155 660 aa4.79□□□□□ -1.64
CLK1-209ENST00000472679 SIX3O95343 332 aaPredicted RBP4.79□□□□□ -1.64
CLK1-209ENST00000472679 VIMP08670 466 aaKnown RBP4.79□□□□□ -1.64
CLK1-209ENST00000472679 ANKRD34CP0C6C1 535 aa4.79□□□□□ -1.64
CLK1-209ENST00000472679 GLULP15104 373 aa4.79□□□□□ -1.64
CLK1-209ENST00000472679 PRKACGP22612 351 aa4.79□□□□□ -1.64
CLK1-209ENST00000472679 SSTR1P30872 391 aa4.79□□□□□ -1.64
CLK1-209ENST00000472679 TLX1P31314 330 aaPredicted RBP4.79□□□□□ -1.64
CLK1-209ENST00000472679 SRSF9Q13242 221 aaKnown RBP eCLIP4.79□□□□□ -1.64
CLK1-209ENST00000472679 SGCGQ13326 291 aa4.79□□□□□ -1.64
CLK1-209ENST00000472679 NECTIN1Q15223 517 aa4.79□□□□□ -1.64
CLK1-209ENST00000472679 TAB1Q15750 504 aa4.79□□□□□ -1.64
CLK1-209ENST00000472679 NOTUMQ6P988 496 aa4.79□□□□□ -1.64
CLK1-209ENST00000472679 GALNTL5Q7Z4T8 443 aa4.79□□□□□ -1.64
CLK1-209ENST00000472679 CCDC60Q8IWA6 550 aaPredicted RBP4.79□□□□□ -1.64
CLK1-209ENST00000472679 MAPK1IP1LQ8NDC0 245 aa4.79□□□□□ -1.64
CLK1-209ENST00000472679 OR4C15Q8NGM1 316 aa4.79□□□□□ -1.64
CLK1-209ENST00000472679 TRAF3IP1Q8TDR0 691 aaPredicted RBP4.79□□□□□ -1.64
CLK1-209ENST00000472679 RIT1Q92963 219 aa4.79□□□□□ -1.64
CLK1-209ENST00000472679 NSMCE3Q96MG7 304 aa4.79□□□□□ -1.64
CLK1-209ENST00000472679 IWS1Q96ST2 819 aa4.79□□□□□ -1.64
CLK1-209ENST00000472679 MCRIP2Q9BUT9 160 aaKnown RBP4.79□□□□□ -1.64
CLK1-209ENST00000472679 DNAI2Q9GZS0 605 aa4.79□□□□□ -1.64
CLK1-209ENST00000472679 SELENOFO60613 162 aa4.78□□□□□ -1.64
CLK1-209ENST00000472679 SORBS2O94875 1100 aaKnown RBP4.78□□□□□ -1.64
CLK1-209ENST00000472679 HLA-FP30511 346 aa4.78□□□□□ -1.64
CLK1-209ENST00000472679 IL10RBQ08334 325 aa4.78□□□□□ -1.64
CLK1-209ENST00000472679 FASTKD1Q53R41 847 aaKnown RBP4.78□□□□□ -1.64
CLK1-209ENST00000472679 CES4AQ5XG92 561 aa4.78□□□□□ -1.64
CLK1-209ENST00000472679 FUT10Q6P4F1 479 aa4.78□□□□□ -1.64
CLK1-209ENST00000472679 ZNF613Q6PF04 617 aa4.78□□□□□ -1.64
CLK1-209ENST00000472679 CROCCP3Q8IVE0 287 aa4.78□□□□□ -1.64
CLK1-209ENST00000472679 TCEANCQ8N8B7 351 aa4.78□□□□□ -1.64
CLK1-209ENST00000472679 ZNF485Q8NCK3 441 aa4.78□□□□□ -1.64
CLK1-209ENST00000472679 DEPDC1BQ8WUY9 529 aa4.78□□□□□ -1.64
CLK1-209ENST00000472679 CORO2AQ92828 525 aa4.78□□□□□ -1.64
CLK1-209ENST00000472679 NXPE2Q96DL1 559 aa4.78□□□□□ -1.64
CLK1-209ENST00000472679 BSCL2Q96G97 398 aaPredicted RBP4.78□□□□□ -1.64
CLK1-209ENST00000472679 EGLN1Q9GZT9 426 aa4.78□□□□□ -1.64
CLK1-209ENST00000472679 MINDY3Q9H8M7 445 aa4.78□□□□□ -1.64
CLK1-209ENST00000472679 HACD3Q9P035 362 aa4.78□□□□□ -1.64
CLK1-209ENST00000472679 IL36AQ9UHA7 158 aa4.78□□□□□ -1.64
CLK1-209ENST00000472679 PILRBQ9UKJ0 227 aa4.78□□□□□ -1.64
CLK1-209ENST00000472679 RUVBL2Q9Y230 463 aaKnown RBP4.78□□□□□ -1.64
CLK1-209ENST00000472679 RNF215Q9Y6U7 377 aa4.78□□□□□ -1.64
CLK1-209ENST00000472679 PALM2-AKAP2B1ALY0 433 aaPredicted RBP4.77□□□□□ -1.65
CLK1-209ENST00000472679 TMEM150CB9EJG8 249 aa4.77□□□□□ -1.65
CLK1-209ENST00000472679 RTCAO00442 366 aaKnown RBP4.77□□□□□ -1.65
CLK1-209ENST00000472679 RPN1P04843 607 aaKnown RBP4.77□□□□□ -1.65
CLK1-209ENST00000472679 DUSP5Q16690 384 aa4.77□□□□□ -1.65
CLK1-209ENST00000472679 CDO1Q16878 200 aa4.77□□□□□ -1.65
CLK1-209ENST00000472679 FAM46CQ5VWP2 391 aa4.77□□□□□ -1.65
CLK1-209ENST00000472679 PRSS55Q6UWB4 352 aaPredicted RBP4.77□□□□□ -1.65
CLK1-209ENST00000472679 PET117Q6UWS5 81 aa4.77□□□□□ -1.65
CLK1-209ENST00000472679 C11orf45Q8TAV5 145 aa4.77□□□□□ -1.65
CLK1-209ENST00000472679 MR1Q95460 341 aa4.77□□□□□ -1.65
CLK1-209ENST00000472679 ZNF689Q96CS4 500 aaPredicted RBP4.77□□□□□ -1.65
CLK1-209ENST00000472679 CNRIP1Q96F85 164 aaPredicted RBP4.77□□□□□ -1.65
CLK1-209ENST00000472679 THUMPD3Q9BV44 507 aaKnown RBP4.77□□□□□ -1.65
CLK1-209ENST00000472679 UPF3AQ9H1J1 476 aaKnown RBP4.77□□□□□ -1.65
CLK1-209ENST00000472679 IARS2Q9NSE4 1012 aaKnown RBP4.77□□□□□ -1.65
CLK1-209ENST00000472679 MPTX1A8MV57 137 aa4.76□□□□□ -1.65
CLK1-209ENST00000472679 NPIPB9F8W1W9 429 aa4.76□□□□□ -1.65
CLK1-209ENST00000472679 PI4K2BG5E9Z4 385 aa4.76□□□□□ -1.65
CLK1-209ENST00000472679 CYTIPO60759 359 aa4.76□□□□□ -1.65
CLK1-209ENST00000472679 SAP30O75446 220 aa4.76□□□□□ -1.65
CLK1-209ENST00000472679 YES1P07947 543 aa4.76□□□□□ -1.65
CLK1-209ENST00000472679 DLATP10515 647 aaKnown RBP4.76□□□□□ -1.65
CLK1-209ENST00000472679 RBMS1P29558 406 aaKnown RBP4.76□□□□□ -1.65
CLK1-209ENST00000472679 HNF4AP41235 474 aa4.76□□□□□ -1.65
CLK1-209ENST00000472679 TSFMP43897 325 aaKnown RBP4.76□□□□□ -1.65
CLK1-209ENST00000472679 CLDN17P56750 224 aa4.76□□□□□ -1.65
CLK1-209ENST00000472679 GSCP56915 257 aaPredicted RBP4.76□□□□□ -1.65
CLK1-209ENST00000472679 RBP5P82980 135 aa4.76□□□□□ -1.65
CLK1-209ENST00000472679 CYCSP99999 105 aaKnown RBP4.76□□□□□ -1.65
CLK1-209ENST00000472679 ZRANB3Q5FWF4 1079 aa4.76□□□□□ -1.65
CLK1-209ENST00000472679 KIF6Q6ZMV9 814 aa4.76□□□□□ -1.65
CLK1-209ENST00000472679 SPATA31D1Q6ZQQ2 1576 aa4.76□□□□□ -1.65
CLK1-209ENST00000472679 PRUNE1Q86TP1 453 aa4.76□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms