RNA–Protein interactions for RNA: ENST00000466969.1

UBR4-210, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 2

Gene UBR4, Length 510 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-210ENST00000466969 ZNF696Q9H7X3 374 aa11.71□□□□□ -0.53
UBR4-210ENST00000466969 DEPPQ9NTK1 212 aa11.71□□□□□ -0.53
UBR4-210ENST00000466969 TRMT1Q9NXH9 659 aaKnown RBP11.71□□□□□ -0.53
UBR4-210ENST00000466969 CTNND2Q9UQB3 1225 aa11.71□□□□□ -0.53
UBR4-210ENST00000466969 ROS1P08922 2347 aa11.71□□□□□ -0.54
UBR4-210ENST00000466969 LMX1BO60663 402 aa11.7□□□□□ -0.54
UBR4-210ENST00000466969 HCN1O60741 890 aa11.7□□□□□ -0.54
UBR4-210ENST00000466969 FKBP9O95302 570 aa11.7□□□□□ -0.54
UBR4-210ENST00000466969 ATP1A3P13637 1013 aa11.7□□□□□ -0.54
UBR4-210ENST00000466969 ITGA2P17301 1181 aa11.7□□□□□ -0.54
UBR4-210ENST00000466969 CD9P21926 228 aa11.7□□□□□ -0.54
UBR4-210ENST00000466969 ACVR1BP36896 505 aa11.7□□□□□ -0.54
UBR4-210ENST00000466969 MC3RP41968 323 aa11.7□□□□□ -0.54
UBR4-210ENST00000466969 AVPR1BP47901 424 aa11.7□□□□□ -0.54
UBR4-210ENST00000466969 ADARP55265 1226 aaKnown RBP11.7□□□□□ -0.54
UBR4-210ENST00000466969 GARNL3Q5VVW2 1013 aa11.7□□□□□ -0.54
UBR4-210ENST00000466969 ISM2Q6H9L7 571 aa11.7□□□□□ -0.54
UBR4-210ENST00000466969 LRRC8BQ6P9F7 803 aa11.7□□□□□ -0.54
UBR4-210ENST00000466969 ABHD17CQ6PCB6 329 aa11.7□□□□□ -0.54
UBR4-210ENST00000466969 MON1BQ7L1V2 547 aa11.7□□□□□ -0.54
UBR4-210ENST00000466969 LUZP2Q86TE4 346 aa11.7□□□□□ -0.54
UBR4-210ENST00000466969 LINC01555Q8NAE3 123 aa11.7□□□□□ -0.54
UBR4-210ENST00000466969 HSPH1Q92598 858 aa11.7□□□□□ -0.54
UBR4-210ENST00000466969 C1orf159Q96HA4 380 aa11.7□□□□□ -0.54
UBR4-210ENST00000466969 KCMF1Q9P0J7 381 aa11.7□□□□□ -0.54
UBR4-210ENST00000466969 ERVK-11Q9UQG0 969 aa11.7□□□□□ -0.54
UBR4-210ENST00000466969 RUVBL1Q9Y265 456 aaKnown RBP11.7□□□□□ -0.54
UBR4-210ENST00000466969 KIAA1549Q9HCM3 1950 aa11.7□□□□□ -0.54
UBR4-210ENST00000466969 AHRRA9YTQ3 701 aa11.69□□□□□ -0.54
UBR4-210ENST00000466969 F8VZ95 297 aa11.69□□□□□ -0.54
UBR4-210ENST00000466969 BUD23O43709 281 aaKnown RBP11.69□□□□□ -0.54
UBR4-210ENST00000466969 MFSD11O43934 449 aa11.69□□□□□ -0.54
UBR4-210ENST00000466969 GFPT2O94808 682 aa11.69□□□□□ -0.54
UBR4-210ENST00000466969 GLSO94925 669 aaPredicted RBP11.69□□□□□ -0.54
UBR4-210ENST00000466969 CELA3AP09093 270 aa11.69□□□□□ -0.54
UBR4-210ENST00000466969 COMPP49747 757 aaPredicted RBP11.69□□□□□ -0.54
UBR4-210ENST00000466969 ACTG1P63261 375 aa11.69□□□□□ -0.54
UBR4-210ENST00000466969 NSDHLQ15738 373 aa11.69□□□□□ -0.54
UBR4-210ENST00000466969 CLEC16AQ2KHT3 1053 aa11.69□□□□□ -0.54
UBR4-210ENST00000466969 ACSF3Q4G176 576 aaPredicted RBP11.69□□□□□ -0.54
UBR4-210ENST00000466969 RNF44Q7L0R7 432 aa11.69□□□□□ -0.54
UBR4-210ENST00000466969 ZC3HAV1Q7Z2W4 902 aaKnown RBP11.69□□□□□ -0.54
UBR4-210ENST00000466969 GLT6D1Q7Z4J2 308 aa11.69□□□□□ -0.54
UBR4-210ENST00000466969 CSNK1A1LQ8N752 337 aa11.69□□□□□ -0.54
UBR4-210ENST00000466969 TSGA13Q96PP4 275 aa11.69□□□□□ -0.54
UBR4-210ENST00000466969 HS3ST6Q96QI5 342 aa11.69□□□□□ -0.54
UBR4-210ENST00000466969 ANGPTL4Q9BY76 406 aa11.69□□□□□ -0.54
UBR4-210ENST00000466969 DEFB126Q9BYW3 111 aa11.69□□□□□ -0.54
UBR4-210ENST00000466969 STAU2Q9NUL3 570 aaKnown RBP eCLIP11.69□□□□□ -0.54
UBR4-210ENST00000466969 SPRR3Q9UBC9 169 aa11.69□□□□□ -0.54
UBR4-210ENST00000466969 CRLS1Q9UJA2 301 aa11.69□□□□□ -0.54
UBR4-210ENST00000466969 EML6Q6ZMW3 1958 aa11.68□□□□□ -0.54
UBR4-210ENST00000466969 OR2W5A6NFC9 320 aa11.68□□□□□ -0.54
UBR4-210ENST00000466969 H0YGG7 62 aa11.68□□□□□ -0.54
UBR4-210ENST00000466969 FOXS1O43638 330 aa11.68□□□□□ -0.54
UBR4-210ENST00000466969 ADAM11O75078 769 aa11.68□□□□□ -0.54
UBR4-210ENST00000466969 VPS26AO75436 327 aa11.68□□□□□ -0.54
UBR4-210ENST00000466969 IL18BPO95998 194 aa11.68□□□□□ -0.54
UBR4-210ENST00000466969 CRYGSP22914 178 aa11.68□□□□□ -0.54
UBR4-210ENST00000466969 ACADLP28330 430 aa11.68□□□□□ -0.54
UBR4-210ENST00000466969 MTTPP55157 894 aa11.68□□□□□ -0.54
UBR4-210ENST00000466969 OR4D2P58180 307 aa11.68□□□□□ -0.54
UBR4-210ENST00000466969 ARF3P61204 181 aaPredicted RBP11.68□□□□□ -0.54
UBR4-210ENST00000466969 RPS4XP62701 263 aaKnown RBP11.68□□□□□ -0.54
UBR4-210ENST00000466969 ABRAXAS2Q15018 415 aa11.68□□□□□ -0.54
UBR4-210ENST00000466969 HKDC1Q2TB90 917 aa11.68□□□□□ -0.54
UBR4-210ENST00000466969 ZNF658BQ4V348 819 aaPredicted RBP11.68□□□□□ -0.54
UBR4-210ENST00000466969 KCTD11Q693B1 232 aa11.68□□□□□ -0.54
UBR4-210ENST00000466969 CYB5R2Q6BCY4 276 aa11.68□□□□□ -0.54
UBR4-210ENST00000466969 KIAA0408Q6ZU52 694 aa11.68□□□□□ -0.54
UBR4-210ENST00000466969 SLC26A11Q86WA9 606 aa11.68□□□□□ -0.54
UBR4-210ENST00000466969 LMNTD1Q8N9Z9 388 aa11.68□□□□□ -0.54
UBR4-210ENST00000466969 CCNYQ8ND76 341 aa11.68□□□□□ -0.54
UBR4-210ENST00000466969 LRRN4Q8WUT4 740 aa11.68□□□□□ -0.54
UBR4-210ENST00000466969 HEXDCQ8WVB3 486 aa11.68□□□□□ -0.54
UBR4-210ENST00000466969 NTNG2Q96CW9 530 aa11.68□□□□□ -0.54
UBR4-210ENST00000466969 IMP4Q96G21 291 aaKnown RBP11.68□□□□□ -0.54
UBR4-210ENST00000466969 PCDHB18PQ96TA0 734 aa11.68□□□□□ -0.54
UBR4-210ENST00000466969 COPS8Q99627 209 aa11.68□□□□□ -0.54
UBR4-210ENST00000466969 PIGQQ9BRB3 760 aa11.68□□□□□ -0.54
UBR4-210ENST00000466969 STK33Q9BYT3 514 aa11.68□□□□□ -0.54
UBR4-210ENST00000466969 SLCO5A1Q9H2Y9 848 aa11.68□□□□□ -0.54
UBR4-210ENST00000466969 IL1RL2Q9HB29 575 aa11.68□□□□□ -0.54
UBR4-210ENST00000466969 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP11.68□□□□□ -0.54
UBR4-210ENST00000466969 HACD3Q9P035 362 aa11.68□□□□□ -0.54
UBR4-210ENST00000466969 FEZF1A0PJY2 475 aa11.67□□□□□ -0.54
UBR4-210ENST00000466969 A8MVJ9 347 aa11.67□□□□□ -0.54
UBR4-210ENST00000466969 LIN7AO14910 233 aaPredicted RBP11.67□□□□□ -0.54
UBR4-210ENST00000466969 STX7O15400 261 aaKnown RBP11.67□□□□□ -0.54
UBR4-210ENST00000466969 GSTM1P09488 218 aa11.67□□□□□ -0.54
UBR4-210ENST00000466969 TMIGD3P0DMS9 266 aaPredicted RBP11.67□□□□□ -0.54
UBR4-210ENST00000466969 ENDOUP21128 410 aaKnown RBP11.67□□□□□ -0.54
UBR4-210ENST00000466969 TNNT3P45378 269 aaPredicted RBP11.67□□□□□ -0.54
UBR4-210ENST00000466969 XCR1P46094 333 aa11.67□□□□□ -0.54
UBR4-210ENST00000466969 VLDLRP98155 873 aa11.67□□□□□ -0.54
UBR4-210ENST00000466969 GSTM4Q03013 218 aa11.67□□□□□ -0.54
UBR4-210ENST00000466969 SF3B4Q15427 424 aaKnown RBP eCLIP11.67□□□□□ -0.543e-44■■■■■ 91.2
UBR4-210ENST00000466969 MAN2A1Q16706 1144 aa11.67□□□□□ -0.54
UBR4-210ENST00000466969 FAM120AOSQ5T036 256 aa11.67□□□□□ -0.54
UBR4-210ENST00000466969 KLHDC7AQ5VTJ3 777 aa11.67□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms