RNA–Protein interactions for RNA: ENST00000464577.1

USP48-206, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 2

Gene USP48, Length 2,089 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-206ENST00000464577 GALK2Q01415 458 aa7.05□□□□□ -1.28
USP48-206ENST00000464577 ASAH1Q13510 395 aa7.05□□□□□ -1.28
USP48-206ENST00000464577 DUSP7Q16829 419 aa7.05□□□□□ -1.28
USP48-206ENST00000464577 TBRG1Q3YBR2 411 aa7.05□□□□□ -1.28
USP48-206ENST00000464577 ARMC4Q5T2S8 1044 aa7.05□□□□□ -1.28
USP48-206ENST00000464577 GPRC6AQ5T6X5 926 aa7.05□□□□□ -1.28
USP48-206ENST00000464577 LYPLAL1Q5VWZ2 237 aa7.05□□□□□ -1.28
USP48-206ENST00000464577 LRRC66Q68CR7 880 aa7.05□□□□□ -1.28
USP48-206ENST00000464577 KIAA1841Q6NSI8 718 aa7.05□□□□□ -1.28
USP48-206ENST00000464577 Q6ZPB1 254 aaPredicted RBP7.05□□□□□ -1.28
USP48-206ENST00000464577 GALNT10Q86SR1 603 aa7.05□□□□□ -1.28
USP48-206ENST00000464577 SAPCD2Q86UD0 394 aa7.05□□□□□ -1.28
USP48-206ENST00000464577 GATAD2AQ86YP4 633 aa7.05□□□□□ -1.28
USP48-206ENST00000464577 LIX1LQ8IVB5 337 aa7.05□□□□□ -1.28
USP48-206ENST00000464577 OR8H2Q8N162 312 aa7.05□□□□□ -1.28
USP48-206ENST00000464577 OR10G2Q8NGC3 310 aa7.05□□□□□ -1.28
USP48-206ENST00000464577 SELENOMQ8WWX9 145 aa7.05□□□□□ -1.28
USP48-206ENST00000464577 TTC9Q92623 222 aa7.05□□□□□ -1.28
USP48-206ENST00000464577 FBXO32Q969P5 355 aa7.05□□□□□ -1.28
USP48-206ENST00000464577 EXOC2Q96KP1 924 aa7.05□□□□□ -1.28
USP48-206ENST00000464577 PANX1Q96RD7 426 aa7.05□□□□□ -1.28
USP48-206ENST00000464577 ELOVL6Q9H5J4 265 aa7.05□□□□□ -1.28
USP48-206ENST00000464577 ERVK13-1Q9NX77 482 aa7.05□□□□□ -1.28
USP48-206ENST00000464577 ENOPH1Q9UHY7 261 aa7.05□□□□□ -1.28
USP48-206ENST00000464577 CORO2BQ9UQ03 480 aa7.05□□□□□ -1.28
USP48-206ENST00000464577 Q9Y3F1 56 aa7.05□□□□□ -1.28
USP48-206ENST00000464577 PCDHB11Q9Y5F2 797 aa7.05□□□□□ -1.28
USP48-206ENST00000464577 V9GYH0 126 aa7.05□□□□□ -1.28
USP48-206ENST00000464577 MICAL3Q7RTP6 2002 aa7.05□□□□□ -1.28
USP48-206ENST00000464577 MEIOCA2RUB1 952 aa7.05□□□□□ -1.28
USP48-206ENST00000464577 IQCJ-SCHIP1C9J366 451 aaPredicted RBP7.05□□□□□ -1.28
USP48-206ENST00000464577 GFRA2O00451 464 aa7.05□□□□□ -1.28
USP48-206ENST00000464577 CTDSP2O14595 271 aa7.05□□□□□ -1.28
USP48-206ENST00000464577 AP3D1O14617 1153 aa7.05□□□□□ -1.28
USP48-206ENST00000464577 INPPL1O15357 1258 aa7.05□□□□□ -1.28
USP48-206ENST00000464577 MPZL2O60487 215 aa7.05□□□□□ -1.28
USP48-206ENST00000464577 TLR5O60602 858 aa7.05□□□□□ -1.28
USP48-206ENST00000464577 ABCB1P08183 1280 aaPredicted RBP7.05□□□□□ -1.28
USP48-206ENST00000464577 ANXA5P08758 320 aa7.05□□□□□ -1.28
USP48-206ENST00000464577 ZNF865P0CJ78 1059 aaPredicted RBP7.05□□□□□ -1.28
USP48-206ENST00000464577 CBSLP0DN79 551 aa7.05□□□□□ -1.28
USP48-206ENST00000464577 COL6A1P12109 1028 aa7.05□□□□□ -1.28
USP48-206ENST00000464577 AMD1P17707 334 aa7.05□□□□□ -1.28
USP48-206ENST00000464577 CBSP35520 551 aa7.05□□□□□ -1.28
USP48-206ENST00000464577 HMGCLP35914 325 aa7.05□□□□□ -1.28
USP48-206ENST00000464577 MLLT3P42568 568 aaPredicted RBP7.05□□□□□ -1.28
USP48-206ENST00000464577 NUDT6P53370 316 aa7.05□□□□□ -1.28
USP48-206ENST00000464577 BNC1Q01954 994 aa7.05□□□□□ -1.28
USP48-206ENST00000464577 ZNF33BQ06732 778 aa7.05□□□□□ -1.28
USP48-206ENST00000464577 MGAT3Q09327 533 aa7.05□□□□□ -1.28
USP48-206ENST00000464577 PPIGQ13427 754 aaKnown RBP eCLIP7.05□□□□□ -1.28
USP48-206ENST00000464577 ELOAQ14241 798 aaKnown RBP7.05□□□□□ -1.28
USP48-206ENST00000464577 DSC3Q14574 896 aa7.05□□□□□ -1.28
USP48-206ENST00000464577 TSTQ16762 297 aaKnown RBP7.05□□□□□ -1.28
USP48-206ENST00000464577 CCDC58Q4VC31 144 aa7.05□□□□□ -1.28
USP48-206ENST00000464577 NCEH1Q6PIU2 408 aa7.05□□□□□ -1.28
USP48-206ENST00000464577 MACC1Q6ZN28 852 aa7.05□□□□□ -1.28
USP48-206ENST00000464577 TSEN54Q7Z6J9 526 aaKnown RBP7.05□□□□□ -1.28
USP48-206ENST00000464577 NOXA1Q86UR1 476 aa7.05□□□□□ -1.28
USP48-206ENST00000464577 NLRP8Q86W28 1048 aa7.05□□□□□ -1.28
USP48-206ENST00000464577 SERPINA9Q86WD7 417 aa7.05□□□□□ -1.28
USP48-206ENST00000464577 SLC5A8Q8N695 610 aa7.05□□□□□ -1.28
USP48-206ENST00000464577 L3MBTL4Q8NA19 623 aa7.05□□□□□ -1.28
USP48-206ENST00000464577 OR8J2Q8NGG1 315 aa7.05□□□□□ -1.28
USP48-206ENST00000464577 ASB15Q8WXK1 588 aa7.05□□□□□ -1.28
USP48-206ENST00000464577 SLC7A6Q92536 515 aa7.05□□□□□ -1.28
USP48-206ENST00000464577 MAGEB10Q96LZ2 347 aaPredicted RBP7.05□□□□□ -1.28
USP48-206ENST00000464577 NEDD4LQ96PU5 975 aa7.05□□□□□ -1.28
USP48-206ENST00000464577 MCCC1Q96RQ3 725 aaPredicted RBP7.05□□□□□ -1.28
USP48-206ENST00000464577 FEVQ99581 238 aa7.05□□□□□ -1.28
USP48-206ENST00000464577 MGLLQ99685 303 aa7.05□□□□□ -1.28
USP48-206ENST00000464577 KCNS3Q9BQ31 491 aa7.05□□□□□ -1.28
USP48-206ENST00000464577 DOHHQ9BU89 302 aa7.05□□□□□ -1.28
USP48-206ENST00000464577 SPON2Q9BUD6 331 aa7.05□□□□□ -1.28
USP48-206ENST00000464577 GON7Q9BXV9 100 aa7.05□□□□□ -1.28
USP48-206ENST00000464577 SRRQ9GZT4 340 aa7.05□□□□□ -1.28
USP48-206ENST00000464577 SLC22A4Q9H015 551 aa7.05□□□□□ -1.28
USP48-206ENST00000464577 AP5M1Q9H0R1 490 aa7.05□□□□□ -1.28
USP48-206ENST00000464577 SLC32A1Q9H598 525 aa7.05□□□□□ -1.28
USP48-206ENST00000464577 RUBCNLQ9H714 662 aa7.05□□□□□ -1.28
USP48-206ENST00000464577 PRDM8Q9NQV8 689 aa7.05□□□□□ -1.28
USP48-206ENST00000464577 LATS2Q9NRM7 1088 aa7.05□□□□□ -1.28
USP48-206ENST00000464577 ACOXLQ9NUZ1 547 aa7.05□□□□□ -1.28
USP48-206ENST00000464577 KLHL42Q9P2K6 505 aa7.05□□□□□ -1.28
USP48-206ENST00000464577 DUSP12Q9UNI6 340 aa7.05□□□□□ -1.28
USP48-206ENST00000464577 CARD8Q9Y2G2 431 aa7.05□□□□□ -1.28
USP48-206ENST00000464577 FNDC3AQ9Y2H6 1198 aaKnown RBP7.05□□□□□ -1.28
USP48-206ENST00000464577 PCDHGC4Q9Y5F7 938 aa7.05□□□□□ -1.28
USP48-206ENST00000464577 CFAP20Q9Y6A4 193 aaKnown RBP7.05□□□□□ -1.28
USP48-206ENST00000464577 TDRD15B5MCY1 1934 aaKnown RBP7.04□□□□□ -1.28
USP48-206ENST00000464577 PLXNA4Q9HCM2 1894 aa7.04□□□□□ -1.28
USP48-206ENST00000464577 TRBV5-4A0A0C4DH59 114 aa7.04□□□□□ -1.28
USP48-206ENST00000464577 A0A0U1RQF3 1178 aa7.04□□□□□ -1.28
USP48-206ENST00000464577 IQCMA0A1B0GVH7 501 aa7.04□□□□□ -1.28
USP48-206ENST00000464577 KRT87PA6NCN2 255 aa7.04□□□□□ -1.28
USP48-206ENST00000464577 TMEM229AB2RXF0 380 aa7.04□□□□□ -1.28
USP48-206ENST00000464577 GAPDHSO14556 408 aaPredicted RBP7.04□□□□□ -1.28
USP48-206ENST00000464577 SCAMP3O14828 347 aaKnown RBP7.04□□□□□ -1.28
USP48-206ENST00000464577 GPR39O43194 453 aa7.04□□□□□ -1.28
USP48-206ENST00000464577 SEC14L5O43304 696 aa7.04□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms