RNA–Protein interactions for RNA: ENST00000457422.6

CCDC43-202, Transcript of coiled-coil domain containing 43, humanhuman

TSL 1 (best) BASIC

Gene CCDC43, Length 2,058 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC43-202ENST00000457422 VPS37AQ8NEZ2 397 aa16.07■□□□□ 0.16
CCDC43-202ENST00000457422 OR2L2Q8NH16 312 aa16.07■□□□□ 0.16
CCDC43-202ENST00000457422 SAMD11Q96NU1 681 aa16.07■□□□□ 0.16
CCDC43-202ENST00000457422 AMBRA1Q9C0C7 1298 aa16.07■□□□□ 0.16
CCDC43-202ENST00000457422 C3orf18Q9UK00 162 aa16.07■□□□□ 0.16
CCDC43-202ENST00000457422 RPS6KA6Q9UK32 745 aa16.07■□□□□ 0.16
CCDC43-202ENST00000457422 C1orf226A1L170 272 aa16.07■□□□□ 0.16
CCDC43-202ENST00000457422 GRXCR1A8MXD5 290 aa16.07■□□□□ 0.16
CCDC43-202ENST00000457422 C1GALT1C1LP0DN25 315 aa16.07■□□□□ 0.16
CCDC43-202ENST00000457422 PPIBP23284 216 aaKnown RBP16.07■□□□□ 0.16
CCDC43-202ENST00000457422 ACADLP28330 430 aa16.07■□□□□ 0.16
CCDC43-202ENST00000457422 TAP2Q03519 686 aa16.07■□□□□ 0.16
CCDC43-202ENST00000457422 GPM6BQ13491 265 aa16.07■□□□□ 0.16
CCDC43-202ENST00000457422 STARD3Q14849 445 aa16.07■□□□□ 0.16
CCDC43-202ENST00000457422 RBBP5Q15291 538 aaKnown RBP16.07■□□□□ 0.16
CCDC43-202ENST00000457422 HKDC1Q2TB90 917 aa16.07■□□□□ 0.16
CCDC43-202ENST00000457422 RFX4Q33E94 735 aa16.07■□□□□ 0.16
CCDC43-202ENST00000457422 ZC3H12BQ5HYM0 836 aaKnown RBP16.07■□□□□ 0.16
CCDC43-202ENST00000457422 PAGE2BQ5JRK9 111 aa16.07■□□□□ 0.16
CCDC43-202ENST00000457422 CATSPEREQ5SY80 951 aa16.07■□□□□ 0.16
CCDC43-202ENST00000457422 SHQ1Q6PI26 577 aaKnown RBP16.07■□□□□ 0.16
CCDC43-202ENST00000457422 TERB1Q8NA31 727 aa16.07■□□□□ 0.16
CCDC43-202ENST00000457422 ZNF555Q8NEP9 628 aa16.07■□□□□ 0.16
CCDC43-202ENST00000457422 SH3KBP1Q96B97 665 aa16.07■□□□□ 0.16
CCDC43-202ENST00000457422 GABARAPL1Q9H0R8 117 aa16.07■□□□□ 0.16
CCDC43-202ENST00000457422 TPT1P8Q9HAU6 139 aa16.07■□□□□ 0.16
CCDC43-202ENST00000457422 ZDHHC4Q9NPG8 344 aa16.07■□□□□ 0.16
CCDC43-202ENST00000457422 IL1RAPQ9NPH3 570 aa16.07■□□□□ 0.16
CCDC43-202ENST00000457422 DYRK4Q9NR20 520 aa16.07■□□□□ 0.16
CCDC43-202ENST00000457422 OBP2AQ9NY56 170 aa16.07■□□□□ 0.16
CCDC43-202ENST00000457422 CORO2BQ9UQ03 480 aa16.07■□□□□ 0.16
CCDC43-202ENST00000457422 AP1M2Q9Y6Q5 423 aa16.07■□□□□ 0.16
CCDC43-202ENST00000457422 PCDH7O60245 1069 aa16.06■□□□□ 0.16
CCDC43-202ENST00000457422 NOBOXO60393 691 aa16.06■□□□□ 0.16
CCDC43-202ENST00000457422 POP7O75817 140 aaKnown RBP16.06■□□□□ 0.16
CCDC43-202ENST00000457422 CA3P07451 260 aa16.06■□□□□ 0.16
CCDC43-202ENST00000457422 ABCB1P08183 1280 aaPredicted RBP16.06■□□□□ 0.16
CCDC43-202ENST00000457422 ZNF8P17098 575 aaPredicted RBP16.06■□□□□ 0.16
CCDC43-202ENST00000457422 KDELR2P33947 212 aa16.06■□□□□ 0.16
CCDC43-202ENST00000457422 PPP1R8Q12972 351 aaKnown RBP16.06■□□□□ 0.16
CCDC43-202ENST00000457422 SLBPQ14493 270 aaKnown RBP eCLIP16.06■□□□□ 0.16
CCDC43-202ENST00000457422 LRRC23Q53EV4 343 aaPredicted RBP16.06■□□□□ 0.16
CCDC43-202ENST00000457422 RBM48Q5RL73 367 aaKnown RBP16.06■□□□□ 0.16
CCDC43-202ENST00000457422 ANKRD34AQ69YU3 496 aa16.06■□□□□ 0.16
CCDC43-202ENST00000457422 UNC5DQ6UXZ4 953 aa16.06■□□□□ 0.16
CCDC43-202ENST00000457422 TRMT11Q7Z4G4 463 aaKnown RBP16.06■□□□□ 0.16
CCDC43-202ENST00000457422 C11orf96Q7Z7L8 435 aa16.06■□□□□ 0.16
CCDC43-202ENST00000457422 MMAAQ8IVH4 418 aaKnown RBP16.06■□□□□ 0.16
CCDC43-202ENST00000457422 SYNPOQ8N3V7 929 aa16.06■□□□□ 0.16
CCDC43-202ENST00000457422 PUM2Q8TB72 1066 aaKnown RBP eCLIP16.06■□□□□ 0.164e-15■■■□□ 18.8
CCDC43-202ENST00000457422 HIC2Q96JB3 615 aa16.06■□□□□ 0.16
CCDC43-202ENST00000457422 HDAC8Q9BY41 377 aa16.06■□□□□ 0.16
CCDC43-202ENST00000457422 ING2Q9H160 280 aa16.06■□□□□ 0.16
CCDC43-202ENST00000457422 CHST8Q9H2A9 424 aa16.06■□□□□ 0.16
CCDC43-202ENST00000457422 MTIF3Q9H2K0 278 aaKnown RBP16.06■□□□□ 0.16
CCDC43-202ENST00000457422 ATP6V1HQ9UI12 483 aa16.06■□□□□ 0.16
CCDC43-202ENST00000457422 TSC22D4Q9Y3Q8 395 aa16.06■□□□□ 0.16
CCDC43-202ENST00000457422 PIPSLA2A3N6 862 aa16.06■□□□□ 0.16
CCDC43-202ENST00000457422 ANTXRLA6NF34 631 aa16.06■□□□□ 0.16
CCDC43-202ENST00000457422 MGAT4DA6NG13 374 aa16.06■□□□□ 0.16
CCDC43-202ENST00000457422 RNASET2O00584 256 aaKnown RBP16.06■□□□□ 0.16
CCDC43-202ENST00000457422 E2F6O75461 281 aa16.06■□□□□ 0.16
CCDC43-202ENST00000457422 CPNE6O95741 557 aa16.06■□□□□ 0.16
CCDC43-202ENST00000457422 ELK4P28324 431 aa16.06■□□□□ 0.16
CCDC43-202ENST00000457422 YAP1P46937 504 aaKnown RBP16.06■□□□□ 0.16
CCDC43-202ENST00000457422 KCNAB2Q13303 367 aa16.06■□□□□ 0.16
CCDC43-202ENST00000457422 SPIDRQ14159 915 aa16.06■□□□□ 0.16
CCDC43-202ENST00000457422 PDGFRLQ15198 375 aa16.06■□□□□ 0.16
CCDC43-202ENST00000457422 ZNF773Q6PK81 442 aa16.06■□□□□ 0.16
CCDC43-202ENST00000457422 CBLL1Q75N03 491 aa16.06■□□□□ 0.16
CCDC43-202ENST00000457422 EIF3MQ7L2H7 374 aaKnown RBP16.06■□□□□ 0.16
CCDC43-202ENST00000457422 SLC5A11Q8WWX8 675 aa16.06■□□□□ 0.16
CCDC43-202ENST00000457422 HDAC2Q92769 488 aaKnown RBP16.06■□□□□ 0.16
CCDC43-202ENST00000457422 FGF13Q92913 245 aa16.06■□□□□ 0.16
CCDC43-202ENST00000457422 RAB7BQ96AH8 199 aa16.06■□□□□ 0.16
CCDC43-202ENST00000457422 COX14Q96I36 57 aa16.06■□□□□ 0.16
CCDC43-202ENST00000457422 TUBA1CQ9BQE3 449 aa16.06■□□□□ 0.16
CCDC43-202ENST00000457422 ZDHHC5Q9C0B5 715 aa16.06■□□□□ 0.16
CCDC43-202ENST00000457422 BHLHE41Q9C0J9 482 aaPredicted RBP16.06■□□□□ 0.16
CCDC43-202ENST00000457422 TRPV4Q9HBA0 871 aa16.06■□□□□ 0.16
CCDC43-202ENST00000457422 TM9SF3Q9HD45 589 aa16.06■□□□□ 0.16
CCDC43-202ENST00000457422 DMRT3Q9NQL9 472 aa16.06■□□□□ 0.16
CCDC43-202ENST00000457422 TMEFF2Q9UIK5 374 aaPredicted RBP16.06■□□□□ 0.16
CCDC43-202ENST00000457422 C1QTNF3-AMACRE9PGA6 284 aa16.05■□□□□ 0.16
CCDC43-202ENST00000457422 ZNF682O95780 498 aa16.05■□□□□ 0.16
CCDC43-202ENST00000457422 FSHRP23945 695 aa16.05■□□□□ 0.16
CCDC43-202ENST00000457422 PIGAP37287 484 aa16.05■□□□□ 0.16
CCDC43-202ENST00000457422 ZNF763Q0D2J5 394 aa16.05■□□□□ 0.16
CCDC43-202ENST00000457422 NFE2L1Q14494 772 aa16.05■□□□□ 0.16
CCDC43-202ENST00000457422 HIST2H2ACQ16777 129 aaPredicted RBP16.05■□□□□ 0.16
CCDC43-202ENST00000457422 HIST2H2AA3Q6FI13 130 aa16.05■□□□□ 0.16
CCDC43-202ENST00000457422 FAM109BQ6ICB4 259 aaPredicted RBP16.05■□□□□ 0.16
CCDC43-202ENST00000457422 GET4Q7L5D6 327 aaPredicted RBP16.05■□□□□ 0.16
CCDC43-202ENST00000457422 DSG4Q86SJ6 1040 aa16.05■□□□□ 0.16
CCDC43-202ENST00000457422 ARL10Q8N8L6 244 aa16.05■□□□□ 0.16
CCDC43-202ENST00000457422 ZNF420Q8TAQ5 688 aaPredicted RBP16.05■□□□□ 0.16
CCDC43-202ENST00000457422 CXorf40AQ8TE69 158 aa16.05■□□□□ 0.16
CCDC43-202ENST00000457422 ZFP90Q8TF47 636 aa16.05■□□□□ 0.16
CCDC43-202ENST00000457422 SETD7Q8WTS6 366 aaKnown RBP16.05■□□□□ 0.16
CCDC43-202ENST00000457422 ISOC1Q96CN7 298 aa16.05■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 81.2 ms