RNA–Protein interactions for RNA: ENST00000456560.6

SEMA3B-209, Transcript of semaphorin 3B, humanhuman

TSL 1 (best) BASIC

Gene SEMA3B, Length 2,221 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3B-209ENST00000456560 ITM2BQ9Y287 266 aa17.74■□□□□ 0.43
SEMA3B-209ENST00000456560 COQ6Q9Y2Z9 468 aa17.74■□□□□ 0.43
SEMA3B-209ENST00000456560 INSL6Q9Y581 213 aa17.74■□□□□ 0.43
SEMA3B-209ENST00000456560 PCDHB11Q9Y5F2 797 aa17.74■□□□□ 0.43
SEMA3B-209ENST00000456560 U3KQV3 271 aa17.74■□□□□ 0.43
SEMA3B-209ENST00000456560 PSMD11O00231 422 aa17.74■□□□□ 0.43
SEMA3B-209ENST00000456560 HTR1AP08908 422 aa17.74■□□□□ 0.43
SEMA3B-209ENST00000456560 ITGAMP11215 1152 aa17.74■□□□□ 0.43
SEMA3B-209ENST00000456560 RYKP34925 604 aa17.74■□□□□ 0.43
SEMA3B-209ENST00000456560 RAD23AP54725 363 aa17.74■□□□□ 0.43
SEMA3B-209ENST00000456560 TOP3AQ13472 1001 aaPredicted RBP17.74■□□□□ 0.43
SEMA3B-209ENST00000456560 IL18R1Q13478 541 aa17.74■□□□□ 0.43
SEMA3B-209ENST00000456560 OR2T5Q6IEZ7 315 aa17.74■□□□□ 0.43
SEMA3B-209ENST00000456560 SLCO4C1Q6ZQN7 724 aa17.74■□□□□ 0.43
SEMA3B-209ENST00000456560 DCDC5Q6ZRR9 648 aa17.74■□□□□ 0.43
SEMA3B-209ENST00000456560 CAMKMTQ7Z624 323 aa17.74■□□□□ 0.43
SEMA3B-209ENST00000456560 C1orf52Q8N6N3 182 aaKnown RBP17.74■□□□□ 0.43
SEMA3B-209ENST00000456560 FBXO15Q8NCQ5 510 aaPredicted RBP17.74■□□□□ 0.43
SEMA3B-209ENST00000456560 OR7G3Q8NG95 312 aa17.74■□□□□ 0.43
SEMA3B-209ENST00000456560 OR2T29Q8NH02 315 aa17.74■□□□□ 0.43
SEMA3B-209ENST00000456560 SNX19Q92543 992 aa17.74■□□□□ 0.43
SEMA3B-209ENST00000456560 BARD1Q99728 777 aaKnown RBP17.74■□□□□ 0.43
SEMA3B-209ENST00000456560 DUSP26Q9BV47 211 aa17.74■□□□□ 0.43
SEMA3B-209ENST00000456560 TM9SF3Q9HD45 589 aa17.74■□□□□ 0.43
SEMA3B-209ENST00000456560 GULP1Q9UBP9 304 aa17.74■□□□□ 0.43
SEMA3B-209ENST00000456560 PRKAG2Q9UGJ0 569 aa17.74■□□□□ 0.43
SEMA3B-209ENST00000456560 BTNL2Q9UIR0 455 aa17.74■□□□□ 0.43
SEMA3B-209ENST00000456560 GABRR3A8MPY1 467 aa17.73■□□□□ 0.43
SEMA3B-209ENST00000456560 SLC9A3R1O14745 358 aaPredicted RBP17.73■□□□□ 0.43
SEMA3B-209ENST00000456560 SPINT1O43278 529 aa17.73■□□□□ 0.43
SEMA3B-209ENST00000456560 HOXA9P31269 272 aa17.73■□□□□ 0.43
SEMA3B-209ENST00000456560 ASMTP46597 345 aa17.73■□□□□ 0.43
SEMA3B-209ENST00000456560 TMBIM6P55061 237 aa17.73■□□□□ 0.43
SEMA3B-209ENST00000456560 TPD52P55327 224 aaPredicted RBP17.73■□□□□ 0.43
SEMA3B-209ENST00000456560 CBLL1Q75N03 491 aa17.73■□□□□ 0.43
SEMA3B-209ENST00000456560 CEP68Q76N32 757 aa17.73■□□□□ 0.43
SEMA3B-209ENST00000456560 ZBTB46Q86UZ6 589 aa17.73■□□□□ 0.43
SEMA3B-209ENST00000456560 CYP4Z1Q86W10 505 aa17.73■□□□□ 0.43
SEMA3B-209ENST00000456560 SYNPOQ8N3V7 929 aa17.73■□□□□ 0.43
SEMA3B-209ENST00000456560 VN1R2Q8NFZ6 395 aa17.73■□□□□ 0.43
SEMA3B-209ENST00000456560 TANKQ92844 425 aa17.73■□□□□ 0.43
SEMA3B-209ENST00000456560 SH3KBP1Q96B97 665 aa17.73■□□□□ 0.43
SEMA3B-209ENST00000456560 LRRC3BQ96PB8 259 aa17.73■□□□□ 0.43
SEMA3B-209ENST00000456560 RPS6KA6Q9UK32 745 aa17.73■□□□□ 0.43
SEMA3B-209ENST00000456560 PAIP2BQ9ULR5 123 aaKnown RBP17.73■□□□□ 0.43
SEMA3B-209ENST00000456560 PRRC2BQ5JSZ5 2229 aaKnown RBP17.73■□□□□ 0.43
SEMA3B-209ENST00000456560 MITFO75030 526 aaPredicted RBP17.72■□□□□ 0.43
SEMA3B-209ENST00000456560 SOD1P00441 154 aa17.72■□□□□ 0.43
SEMA3B-209ENST00000456560 ZNF182P17025 639 aaPredicted RBP17.72■□□□□ 0.43
SEMA3B-209ENST00000456560 CCNA2P20248 432 aa17.72■□□□□ 0.43
SEMA3B-209ENST00000456560 AGXTP21549 392 aa17.72■□□□□ 0.43
SEMA3B-209ENST00000456560 BMPR1AP36894 532 aa17.72■□□□□ 0.43
SEMA3B-209ENST00000456560 DGKGP49619 791 aa17.72■□□□□ 0.43
SEMA3B-209ENST00000456560 BMXP51813 675 aa17.72■□□□□ 0.43
SEMA3B-209ENST00000456560 NFATC3Q12968 1075 aa17.72■□□□□ 0.43
SEMA3B-209ENST00000456560 GTF2IRD2BQ6EKJ0 949 aa17.72■□□□□ 0.43
SEMA3B-209ENST00000456560 EIF3MQ7L2H7 374 aaKnown RBP17.72■□□□□ 0.43
SEMA3B-209ENST00000456560 GTF2IRD2Q86UP8 949 aa17.72■□□□□ 0.43
SEMA3B-209ENST00000456560 ZC3H7AQ8IWR0 971 aaKnown RBP17.72■□□□□ 0.43
SEMA3B-209ENST00000456560 CENPSQ8N2Z9 138 aa17.72■□□□□ 0.43
SEMA3B-209ENST00000456560 HUS1BQ8NHY5 278 aa17.72■□□□□ 0.43
SEMA3B-209ENST00000456560 SPPL3Q8TCT6 385 aa17.72■□□□□ 0.43
SEMA3B-209ENST00000456560 POF1BQ8WVV4 589 aa17.72■□□□□ 0.43
SEMA3B-209ENST00000456560 COQ8BQ96D53 544 aa17.72■□□□□ 0.43
SEMA3B-209ENST00000456560 DTD2Q96FN9 168 aa17.72■□□□□ 0.43
SEMA3B-209ENST00000456560 FOPNLQ96NB1 174 aa17.72■□□□□ 0.43
SEMA3B-209ENST00000456560 CHST8Q9H2A9 424 aa17.72■□□□□ 0.43
SEMA3B-209ENST00000456560 LILRB5O75023 590 aa17.72■□□□□ 0.43
SEMA3B-209ENST00000456560 C1orf105O95561 183 aa17.72■□□□□ 0.43
SEMA3B-209ENST00000456560 CYP17A1P05093 508 aa17.72■□□□□ 0.43
SEMA3B-209ENST00000456560 ANXA4P09525 319 aaPredicted RBP17.72■□□□□ 0.43
SEMA3B-209ENST00000456560 EPCAMP16422 314 aa17.72■□□□□ 0.43
SEMA3B-209ENST00000456560 IDSP22304 550 aa17.72■□□□□ 0.43
SEMA3B-209ENST00000456560 RELAQ04206 551 aa17.72■□□□□ 0.43
SEMA3B-209ENST00000456560 VEZF1Q14119 521 aa17.72■□□□□ 0.43
SEMA3B-209ENST00000456560 CPTPQ5TA50 214 aa17.72■□□□□ 0.43
SEMA3B-209ENST00000456560 CDC26Q8NHZ8 85 aa17.72■□□□□ 0.43
SEMA3B-209ENST00000456560 WFIKKN2Q8TEU8 576 aa17.72■□□□□ 0.43
SEMA3B-209ENST00000456560 WRAP53Q9BUR4 548 aaKnown RBP17.72■□□□□ 0.43
SEMA3B-209ENST00000456560 LHPPQ9H008 270 aa17.72■□□□□ 0.43
SEMA3B-209ENST00000456560 TPT1P8Q9HAU6 139 aa17.72■□□□□ 0.43
SEMA3B-209ENST00000456560 DOLKQ9UPQ8 538 aa17.72■□□□□ 0.43
SEMA3B-209ENST00000456560 MAPRE3Q9UPY8 281 aa17.72■□□□□ 0.43
SEMA3B-209ENST00000456560 NAALAD2Q9Y3Q0 740 aa17.72■□□□□ 0.43
SEMA3B-209ENST00000456560 ORC6Q9Y5N6 252 aa17.72■□□□□ 0.43
SEMA3B-209ENST00000456560 NUP214P35658 2090 aaPredicted RBP17.71■□□□□ 0.43
SEMA3B-209ENST00000456560 C1orf226A1L170 272 aa17.71■□□□□ 0.43
SEMA3B-209ENST00000456560 FUOMA2VDF0 154 aa17.71■□□□□ 0.43
SEMA3B-209ENST00000456560 HNRNPA1P09651 372 aaKnown RBP eCLIP17.71■□□□□ 0.43
SEMA3B-209ENST00000456560 CEBPBP17676 345 aa17.71■□□□□ 0.43
SEMA3B-209ENST00000456560 PBLDP30039 288 aaPredicted RBP17.71■□□□□ 0.43
SEMA3B-209ENST00000456560 ATP1A4Q13733 1029 aa17.71■□□□□ 0.43
SEMA3B-209ENST00000456560 BCL7AQ4VC05 210 aa17.71■□□□□ 0.43
SEMA3B-209ENST00000456560 GRASPQ7Z6J2 395 aaPredicted RBP17.71■□□□□ 0.43
SEMA3B-209ENST00000456560 GALNT10Q86SR1 603 aa17.71■□□□□ 0.43
SEMA3B-209ENST00000456560 PIK3C3Q8NEB9 887 aa17.71■□□□□ 0.43
SEMA3B-209ENST00000456560 SP7Q8TDD2 431 aaPredicted RBP17.71■□□□□ 0.43
SEMA3B-209ENST00000456560 ZNF480Q8WV37 535 aa17.71■□□□□ 0.43
SEMA3B-209ENST00000456560 ING5Q8WYH8 240 aa17.71■□□□□ 0.43
SEMA3B-209ENST00000456560 NEIL2Q969S2 332 aa17.71■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms