RNA–Protein interactions for RNA: ENST00000455546.6

GTF3C3-208, Transcript of general transcription factor IIIC subunit 3, humanhuman

TSL 4

Gene GTF3C3, Length 547 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C3-208ENST00000455546 CD9P21926 228 aa4.49□□□□□ -1.69
GTF3C3-208ENST00000455546 FPR2P25090 351 aa4.49□□□□□ -1.69
GTF3C3-208ENST00000455546 ADRA1DP25100 572 aa4.49□□□□□ -1.69
GTF3C3-208ENST00000455546 TACR1P25103 407 aa4.49□□□□□ -1.69
GTF3C3-208ENST00000455546 PSMA3P25788 255 aa4.49□□□□□ -1.69
GTF3C3-208ENST00000455546 ITGA3P26006 1051 aa4.49□□□□□ -1.69
GTF3C3-208ENST00000455546 AOAHP28039 575 aa4.49□□□□□ -1.69
GTF3C3-208ENST00000455546 PSMB5P28074 263 aa4.49□□□□□ -1.69
GTF3C3-208ENST00000455546 NMBRP28336 390 aa4.49□□□□□ -1.69
GTF3C3-208ENST00000455546 FMO4P31512 558 aa4.49□□□□□ -1.69
GTF3C3-208ENST00000455546 STIP1P31948 543 aaKnown RBP4.49□□□□□ -1.69
GTF3C3-208ENST00000455546 RPL22P35268 128 aaKnown RBP4.49□□□□□ -1.69
GTF3C3-208ENST00000455546 FOLR3P41439 243 aa4.49□□□□□ -1.69
GTF3C3-208ENST00000455546 BDKRB1P46663 353 aa4.49□□□□□ -1.69
GTF3C3-208ENST00000455546 KCNJ1P48048 391 aa4.49□□□□□ -1.69
GTF3C3-208ENST00000455546 RRADP55042 308 aa4.49□□□□□ -1.69
GTF3C3-208ENST00000455546 SESN2P58004 480 aaPredicted RBP4.49□□□□□ -1.69
GTF3C3-208ENST00000455546 VSX2P58304 361 aaPredicted RBP4.49□□□□□ -1.69
GTF3C3-208ENST00000455546 PRAMEP78395 509 aa4.49□□□□□ -1.69
GTF3C3-208ENST00000455546 CDH17Q12864 832 aa4.49□□□□□ -1.69
GTF3C3-208ENST00000455546 FASTKQ14296 549 aaKnown RBP4.49□□□□□ -1.69
GTF3C3-208ENST00000455546 OASLQ15646 514 aaKnown RBP4.49□□□□□ -1.69
GTF3C3-208ENST00000455546 NKAIN1Q4KMZ8 207 aa4.49□□□□□ -1.69
GTF3C3-208ENST00000455546 SYTL3Q4VX76 610 aa4.49□□□□□ -1.69
GTF3C3-208ENST00000455546 DCAF10Q5QP82 559 aa4.49□□□□□ -1.69
GTF3C3-208ENST00000455546 WASHC2DQ5SRD0 308 aa4.49□□□□□ -1.69
GTF3C3-208ENST00000455546 RHBDD2Q6NTF9 364 aa4.49□□□□□ -1.69
GTF3C3-208ENST00000455546 TLDC1Q6P9B6 456 aa4.49□□□□□ -1.69
GTF3C3-208ENST00000455546 PACS1Q6VY07 963 aa4.49□□□□□ -1.69
GTF3C3-208ENST00000455546 CEP128Q6ZU80 1094 aa4.49□□□□□ -1.69
GTF3C3-208ENST00000455546 PPP1R32Q7Z5V6 425 aa4.49□□□□□ -1.69
GTF3C3-208ENST00000455546 MRGPREQ86SM8 312 aa4.49□□□□□ -1.69
GTF3C3-208ENST00000455546 RAB43Q86YS6 212 aa4.49□□□□□ -1.69
GTF3C3-208ENST00000455546 SLC13A5Q86YT5 568 aaPredicted RBP4.49□□□□□ -1.69
GTF3C3-208ENST00000455546 LURAP1LQ8IV03 231 aa4.49□□□□□ -1.69
GTF3C3-208ENST00000455546 PRSS58Q8IYP2 241 aa4.49□□□□□ -1.69
GTF3C3-208ENST00000455546 SLC22A15Q8IZD6 547 aa4.49□□□□□ -1.69
GTF3C3-208ENST00000455546 SYCE1Q8N0S2 351 aa4.49□□□□□ -1.69
GTF3C3-208ENST00000455546 OR4N4Q8N0Y3 316 aa4.49□□□□□ -1.69
GTF3C3-208ENST00000455546 GALNT16Q8N428 558 aa4.49□□□□□ -1.69
GTF3C3-208ENST00000455546 CLEC1AQ8NC01 280 aa4.49□□□□□ -1.69
GTF3C3-208ENST00000455546 CATSPER1Q8NEC5 780 aa4.49□□□□□ -1.69
GTF3C3-208ENST00000455546 SSC4DQ8WTU2 575 aa4.49□□□□□ -1.69
GTF3C3-208ENST00000455546 SKA2Q8WVK7 121 aaPredicted RBP4.49□□□□□ -1.69
GTF3C3-208ENST00000455546 ASZ1Q8WWH4 475 aa4.49□□□□□ -1.69
GTF3C3-208ENST00000455546 INPP5DQ92835 1189 aa4.49□□□□□ -1.69
GTF3C3-208ENST00000455546 TBRG4Q969Z0 631 aaKnown RBP eCLIP4.49□□□□□ -1.69
GTF3C3-208ENST00000455546 PNPLA2Q96AD5 504 aa4.49□□□□□ -1.69
GTF3C3-208ENST00000455546 HES6Q96HZ4 224 aa4.49□□□□□ -1.69
GTF3C3-208ENST00000455546 MAP6Q96JE9 813 aa4.49□□□□□ -1.69
GTF3C3-208ENST00000455546 MAGEB10Q96LZ2 347 aaPredicted RBP4.49□□□□□ -1.69
GTF3C3-208ENST00000455546 FER1L6-AS2Q96M78 137 aa4.49□□□□□ -1.69
GTF3C3-208ENST00000455546 PPP1R2P1Q96PQ5 205 aa4.49□□□□□ -1.69
GTF3C3-208ENST00000455546 ALPK1Q96QP1 1244 aa4.49□□□□□ -1.69
GTF3C3-208ENST00000455546 C19orf43Q9BQ61 176 aa4.49□□□□□ -1.69
GTF3C3-208ENST00000455546 NDC1Q9BTX1 674 aa4.49□□□□□ -1.69
GTF3C3-208ENST00000455546 CARD6Q9BX69 1037 aa4.49□□□□□ -1.69
GTF3C3-208ENST00000455546 TXLNGQ9NUQ3 528 aa4.49□□□□□ -1.69
GTF3C3-208ENST00000455546 OR6C2Q9NZP2 312 aa4.49□□□□□ -1.69
GTF3C3-208ENST00000455546 ERRFI1Q9UJM3 462 aaPredicted RBP4.49□□□□□ -1.69
GTF3C3-208ENST00000455546 ANAPC5Q9UJX4 755 aa4.49□□□□□ -1.69
GTF3C3-208ENST00000455546 SLC39A10Q9ULF5 831 aa4.49□□□□□ -1.69
GTF3C3-208ENST00000455546 TTC7AQ9ULT0 858 aaPredicted RBP4.49□□□□□ -1.69
GTF3C3-208ENST00000455546 G3BP2Q9UN86 482 aaKnown RBP4.49□□□□□ -1.69
GTF3C3-208ENST00000455546 PLCL2Q9UPR0 1127 aa4.49□□□□□ -1.69
GTF3C3-208ENST00000455546 NTNG1Q9Y2I2 539 aa4.49□□□□□ -1.69
GTF3C3-208ENST00000455546 PADI2Q9Y2J8 665 aa4.49□□□□□ -1.69
GTF3C3-208ENST00000455546 AP1M2Q9Y6Q5 423 aa4.49□□□□□ -1.69
GTF3C3-208ENST00000455546 EML6Q6ZMW3 1958 aa4.49□□□□□ -1.69
GTF3C3-208ENST00000455546 CREBBPQ92793 2442 aa4.48□□□□□ -1.69
GTF3C3-208ENST00000455546 hCG_2014768A0A024R1R8 64 aa4.48□□□□□ -1.69
GTF3C3-208ENST00000455546 TCRBV7S3A2A0A539 114 aa4.48□□□□□ -1.69
GTF3C3-208ENST00000455546 TCRBV16S1A1N1A0A5B0 115 aa4.48□□□□□ -1.69
GTF3C3-208ENST00000455546 MIF4GDA9UHW6 222 aaKnown RBP4.48□□□□□ -1.69
GTF3C3-208ENST00000455546 AGPSO00116 658 aa4.48□□□□□ -1.69
GTF3C3-208ENST00000455546 QSOX1O00391 747 aa4.48□□□□□ -1.69
GTF3C3-208ENST00000455546 AQP7O14520 342 aa4.48□□□□□ -1.69
GTF3C3-208ENST00000455546 SOCS6O14544 535 aa4.48□□□□□ -1.69
GTF3C3-208ENST00000455546 PRMT5O14744 637 aaPredicted RBP4.48□□□□□ -1.69
GTF3C3-208ENST00000455546 CD3EAPO15446 510 aaKnown RBP4.48□□□□□ -1.69
GTF3C3-208ENST00000455546 PRICKLE3O43900 615 aaPredicted RBP4.48□□□□□ -1.69
GTF3C3-208ENST00000455546 CTSVO60911 334 aa4.48□□□□□ -1.69
GTF3C3-208ENST00000455546 AVILO75366 819 aa4.48□□□□□ -1.69
GTF3C3-208ENST00000455546 GPC4O75487 556 aa4.48□□□□□ -1.69
GTF3C3-208ENST00000455546 NDUFS3O75489 264 aa4.48□□□□□ -1.69
GTF3C3-208ENST00000455546 KLHL18O94889 574 aa4.48□□□□□ -1.69
GTF3C3-208ENST00000455546 SUN1O94901 812 aa4.48□□□□□ -1.69
GTF3C3-208ENST00000455546 SLCO2B1O94956 709 aa4.48□□□□□ -1.69
GTF3C3-208ENST00000455546 VAPBO95292 243 aa4.48□□□□□ -1.69
GTF3C3-208ENST00000455546 C1orf105O95561 183 aa4.48□□□□□ -1.69
GTF3C3-208ENST00000455546 CLDN1O95832 211 aa4.48□□□□□ -1.69
GTF3C3-208ENST00000455546 EIF2S1P05198 315 aaKnown RBP4.48□□□□□ -1.69
GTF3C3-208ENST00000455546 APOA4P06727 396 aa4.48□□□□□ -1.69
GTF3C3-208ENST00000455546 MGAT1P26572 445 aa4.48□□□□□ -1.69
GTF3C3-208ENST00000455546 PKLRP30613 574 aa4.48□□□□□ -1.69
GTF3C3-208ENST00000455546 TRHRP34981 398 aaPredicted RBP4.48□□□□□ -1.69
GTF3C3-208ENST00000455546 FDFT1P37268 417 aa4.48□□□□□ -1.69
GTF3C3-208ENST00000455546 BCL6P41182 706 aa4.48□□□□□ -1.69
GTF3C3-208ENST00000455546 RAB28P51157 221 aa4.48□□□□□ -1.69
GTF3C3-208ENST00000455546 EIF3BP55884 814 aaKnown RBP4.48□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms