RNA–Protein interactions for RNA: ENST00000450056.6

CHFR-205, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 2 BASIC

Gene CHFR, Length 3,250 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-205ENST00000450056 A0A0G2JMZ2 1700 aa13.6□□□□□ -0.23
CHFR-205ENST00000450056 SLC28A1O00337 649 aa13.6□□□□□ -0.23
CHFR-205ENST00000450056 ESR1P03372 595 aa13.6□□□□□ -0.23
CHFR-205ENST00000450056 BMP1P13497 986 aa13.6□□□□□ -0.23
CHFR-205ENST00000450056 CD72P21854 359 aa13.6□□□□□ -0.23
CHFR-205ENST00000450056 LPOP22079 712 aaPredicted RBP13.6□□□□□ -0.23
CHFR-205ENST00000450056 RPS3P23396 243 aaKnown RBP eCLIP13.6□□□□□ -0.23
CHFR-205ENST00000450056 ACVR2AP27037 513 aa13.6□□□□□ -0.23
CHFR-205ENST00000450056 PTGS2P35354 604 aa13.6□□□□□ -0.23
CHFR-205ENST00000450056 TTPAP49638 278 aa13.6□□□□□ -0.23
CHFR-205ENST00000450056 OLR1P78380 273 aa13.6□□□□□ -0.23
CHFR-205ENST00000450056 MFSD10Q14728 455 aa13.6□□□□□ -0.23
CHFR-205ENST00000450056 VMACQ2NL98 169 aa13.6□□□□□ -0.23
CHFR-205ENST00000450056 MS4A13Q5J8X5 152 aa13.6□□□□□ -0.23
CHFR-205ENST00000450056 RAB41Q5JT25 222 aa13.6□□□□□ -0.23
CHFR-205ENST00000450056 ABI3BPQ7Z7G0 1075 aa13.6□□□□□ -0.23
CHFR-205ENST00000450056 BPHLQ86WA6 291 aaPredicted RBP13.6□□□□□ -0.23
CHFR-205ENST00000450056 LGI4Q8N135 537 aa13.6□□□□□ -0.23
CHFR-205ENST00000450056 STK40Q8N2I9 435 aa13.6□□□□□ -0.23
CHFR-205ENST00000450056 LINC01465Q8N7H1 131 aa13.6□□□□□ -0.23
CHFR-205ENST00000450056 CPPED1Q9BRF8 314 aaPredicted RBP13.6□□□□□ -0.23
CHFR-205ENST00000450056 HDHD5Q9BXW7 423 aa13.6□□□□□ -0.23
CHFR-205ENST00000450056 NEU3Q9UQ49 428 aa13.6□□□□□ -0.23
CHFR-205ENST00000450056 FAM220BPB1ANY3 271 aa13.59□□□□□ -0.23
CHFR-205ENST00000450056 KPNA5O15131 536 aa13.59□□□□□ -0.23
CHFR-205ENST00000450056 GPX5O75715 221 aa13.59□□□□□ -0.23
CHFR-205ENST00000450056 DDNO94850 711 aaPredicted RBP13.59□□□□□ -0.23
CHFR-205ENST00000450056 SLC25A14O95258 325 aaPredicted RBP13.59□□□□□ -0.23
CHFR-205ENST00000450056 PEX11BO96011 259 aa13.59□□□□□ -0.23
CHFR-205ENST00000450056 CLEC2LP0C7M8 214 aa13.59□□□□□ -0.23
CHFR-205ENST00000450056 HNRNPA0Q13151 305 aaKnown RBP13.59□□□□□ -0.23
CHFR-205ENST00000450056 VEPH1Q14D04 833 aa13.59□□□□□ -0.23
CHFR-205ENST00000450056 TBCEQ15813 527 aaPredicted RBP13.59□□□□□ -0.23
CHFR-205ENST00000450056 ADAMTSL2Q86TH1 951 aa13.59□□□□□ -0.23
CHFR-205ENST00000450056 ZZZ3Q8IYH5 903 aa13.59□□□□□ -0.23
CHFR-205ENST00000450056 NIPSNAP1Q9BPW8 284 aa13.59□□□□□ -0.23
CHFR-205ENST00000450056 BOCQ9BWV1 1114 aa13.59□□□□□ -0.23
CHFR-205ENST00000450056 ZC4H2Q9NQZ6 224 aa13.59□□□□□ -0.23
CHFR-205ENST00000450056 TMEM184CQ9NVA4 438 aa13.59□□□□□ -0.23
CHFR-205ENST00000450056 GRIP1Q9Y3R0 1128 aa13.59□□□□□ -0.23
CHFR-205ENST00000450056 NEUROG3Q9Y4Z2 214 aa13.59□□□□□ -0.23
CHFR-205ENST00000450056 A0A0G2JMP0 313 aa13.59□□□□□ -0.23
CHFR-205ENST00000450056 ODC1P11926 461 aa13.59□□□□□ -0.23
CHFR-205ENST00000450056 KCNE1P15382 129 aa13.59□□□□□ -0.23
CHFR-205ENST00000450056 ITPKAP23677 461 aa13.59□□□□□ -0.23
CHFR-205ENST00000450056 RGS4P49798 205 aa13.59□□□□□ -0.23
CHFR-205ENST00000450056 BEX3Q00994 111 aa13.59□□□□□ -0.23
CHFR-205ENST00000450056 FXNQ16595 210 aa13.59□□□□□ -0.23
CHFR-205ENST00000450056 ZNF284Q2VY69 593 aa13.59□□□□□ -0.23
CHFR-205ENST00000450056 CTSL3PQ5NE16 218 aa13.59□□□□□ -0.23
CHFR-205ENST00000450056 TYW3Q6IPR3 259 aaKnown RBP13.59□□□□□ -0.23
CHFR-205ENST00000450056 SCD5Q86SK9 330 aa13.59□□□□□ -0.23
CHFR-205ENST00000450056 KRT73Q86Y46 540 aa13.59□□□□□ -0.23
CHFR-205ENST00000450056 OR10T2Q8NGX3 314 aa13.59□□□□□ -0.23
CHFR-205ENST00000450056 ASB15Q8WXK1 588 aa13.59□□□□□ -0.23
CHFR-205ENST00000450056 MSANTD3Q96H12 275 aa13.59□□□□□ -0.23
CHFR-205ENST00000450056 FAM126AQ9BYI3 521 aaPredicted RBP13.59□□□□□ -0.23
CHFR-205ENST00000450056 POLR2J2Q9GZM3 115 aaKnown RBP13.59□□□□□ -0.23
CHFR-205ENST00000450056 OSER1Q9NX31 292 aa13.59□□□□□ -0.23
CHFR-205ENST00000450056 TMEM161AQ9NX61 479 aa13.59□□□□□ -0.23
CHFR-205ENST00000450056 ARL15Q9NXU5 204 aa13.59□□□□□ -0.23
CHFR-205ENST00000450056 TMPRSS11EQ9UL52 423 aa13.59□□□□□ -0.23
CHFR-205ENST00000450056 LOC285095A0A1B0GVY8 99 aa13.59□□□□□ -0.23
CHFR-205ENST00000450056 NT5C1B-RDH14C9J2C7 533 aa13.59□□□□□ -0.23
CHFR-205ENST00000450056 PDYNP01213 254 aa13.59□□□□□ -0.23
CHFR-205ENST00000450056 ACPPP15309 386 aa13.59□□□□□ -0.23
CHFR-205ENST00000450056 RHOQP17081 205 aa13.59□□□□□ -0.23
CHFR-205ENST00000450056 PSMA1P25786 263 aaKnown RBP13.59□□□□□ -0.23
CHFR-205ENST00000450056 PBX3P40426 434 aa13.59□□□□□ -0.23
CHFR-205ENST00000450056 NRIP1P48552 1158 aa13.59□□□□□ -0.23
CHFR-205ENST00000450056 RORCP51449 518 aa13.59□□□□□ -0.23
CHFR-205ENST00000450056 CDH18Q13634 790 aa13.59□□□□□ -0.23
CHFR-205ENST00000450056 ZNF551Q7Z340 670 aaPredicted RBP13.59□□□□□ -0.23
CHFR-205ENST00000450056 BCDIN3DQ7Z5W3 292 aaKnown RBP13.59□□□□□ -0.23
CHFR-205ENST00000450056 PIH1D2Q8WWB5 315 aa13.59□□□□□ -0.23
CHFR-205ENST00000450056 C1GALT1C1Q96EU7 318 aa13.59□□□□□ -0.23
CHFR-205ENST00000450056 PDLIM5Q96HC4 596 aaKnown RBP13.59□□□□□ -0.23
CHFR-205ENST00000450056 TCF25Q9BQ70 676 aa13.59□□□□□ -0.23
CHFR-205ENST00000450056 NUDT4Q9NZJ9 180 aa13.59□□□□□ -0.23
CHFR-205ENST00000450056 ZNF224Q9NZL3 707 aa13.59□□□□□ -0.23
CHFR-205ENST00000450056 CLEC2DQ9UHP7 191 aa13.59□□□□□ -0.23
CHFR-205ENST00000450056 HSPE1-MOB4S4R3N1 261 aa13.59□□□□□ -0.23
CHFR-205ENST00000450056 MYLKQ15746 1914 aa13.58□□□□□ -0.23
CHFR-205ENST00000450056 J3KTA2 159 aa13.58□□□□□ -0.24
CHFR-205ENST00000450056 MANBAO00462 879 aa13.58□□□□□ -0.24
CHFR-205ENST00000450056 LZTS3O60299 673 aaPredicted RBP13.58□□□□□ -0.24
CHFR-205ENST00000450056 TSPAN12O95859 305 aa13.58□□□□□ -0.24
CHFR-205ENST00000450056 SMPD1P17405 629 aa13.58□□□□□ -0.24
CHFR-205ENST00000450056 SDHBP21912 280 aa13.58□□□□□ -0.24
CHFR-205ENST00000450056 NFE2Q16621 373 aaPredicted RBP13.58□□□□□ -0.24
CHFR-205ENST00000450056 TATDN3Q17R31 274 aa13.58□□□□□ -0.24
CHFR-205ENST00000450056 UBXN11Q5T124 520 aa13.58□□□□□ -0.24
CHFR-205ENST00000450056 ARMC12Q5T9G4 340 aa13.58□□□□□ -0.24
CHFR-205ENST00000450056 CCDC190Q86UF4 302 aa13.58□□□□□ -0.24
CHFR-205ENST00000450056 KCNH6Q9H252 994 aa13.58□□□□□ -0.24
CHFR-205ENST00000450056 FAM83DQ9H4H8 585 aa13.58□□□□□ -0.24
CHFR-205ENST00000450056 ELOVL2Q9NXB9 296 aa13.58□□□□□ -0.24
CHFR-205ENST00000450056 PCDHB9Q9Y5E1 797 aa13.58□□□□□ -0.24
CHFR-205ENST00000450056 A0A1W2PQL4 384 aaPredicted RBP13.58□□□□□ -0.24
CHFR-205ENST00000450056 MAGEB17A8MXT2 336 aa13.58□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms