RNA–Protein interactions for RNA: ENST00000447182.6

SDCBP-204, Transcript of syndecan binding protein, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SDCBP, Length 2,103 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-204ENST00000447182 BTNL2Q9UIR0 455 aa18.44■□□□□ 0.54
SDCBP-204ENST00000447182 FZD4Q9ULV1 537 aa18.44■□□□□ 0.54
SDCBP-204ENST00000447182 MN1Q10571 1320 aaPredicted RBP18.44■□□□□ 0.54
SDCBP-204ENST00000447182 C1orf226A1L170 272 aa18.43■□□□□ 0.54
SDCBP-204ENST00000447182 TTC36A6NLP5 189 aa18.43■□□□□ 0.54
SDCBP-204ENST00000447182 ZNF821O75541 412 aaPredicted RBP18.43■□□□□ 0.54
SDCBP-204ENST00000447182 IGSF6O95976 241 aa18.43■□□□□ 0.54
SDCBP-204ENST00000447182 GSTT2P0CG29 244 aa18.43■□□□□ 0.54
SDCBP-204ENST00000447182 GSTT2BP0CG30 244 aa18.43■□□□□ 0.54
SDCBP-204ENST00000447182 CYP2A7P20853 494 aa18.43■□□□□ 0.54
SDCBP-204ENST00000447182 RRM2P31350 389 aa18.43■□□□□ 0.54
SDCBP-204ENST00000447182 PCGF2P35227 344 aa18.43■□□□□ 0.54
SDCBP-204ENST00000447182 SLC19A1P41440 591 aa18.43■□□□□ 0.54
SDCBP-204ENST00000447182 LIMK1P53667 647 aa18.43■□□□□ 0.54
SDCBP-204ENST00000447182 TPTEP56180 551 aa18.43■□□□□ 0.54
SDCBP-204ENST00000447182 PLD1Q13393 1074 aa18.43■□□□□ 0.54
SDCBP-204ENST00000447182 CCDC92Q53HC0 331 aaPredicted RBP18.43■□□□□ 0.54
SDCBP-204ENST00000447182 DEPDC1Q5TB30 811 aa18.43■□□□□ 0.54
SDCBP-204ENST00000447182 STEAP3Q658P3 488 aa18.43■□□□□ 0.54
SDCBP-204ENST00000447182 PNCKQ6P2M8 343 aa18.43■□□□□ 0.54
SDCBP-204ENST00000447182 RNF180Q86T96 592 aa18.43■□□□□ 0.54
SDCBP-204ENST00000447182 WDR20Q8TBZ3 569 aa18.43■□□□□ 0.54
SDCBP-204ENST00000447182 GGHQ92820 318 aa18.43■□□□□ 0.54
SDCBP-204ENST00000447182 ERLEC1Q96DZ1 483 aa18.43■□□□□ 0.54
SDCBP-204ENST00000447182 SCRN2Q96FV2 425 aa18.43■□□□□ 0.54
SDCBP-204ENST00000447182 KCNC2Q96PR1 638 aa18.43■□□□□ 0.54
SDCBP-204ENST00000447182 P2RY13Q9BPV8 354 aa18.43■□□□□ 0.54
SDCBP-204ENST00000447182 DOHHQ9BU89 302 aa18.43■□□□□ 0.54
SDCBP-204ENST00000447182 DUSP26Q9BV47 211 aa18.43■□□□□ 0.54
SDCBP-204ENST00000447182 LYVE1Q9Y5Y7 322 aa18.43■□□□□ 0.54
SDCBP-204ENST00000447182 PTTG1O95997 202 aa18.43■□□□□ 0.54
SDCBP-204ENST00000447182 VIPP01282 170 aa18.43■□□□□ 0.54
SDCBP-204ENST00000447182 RPLP0P05388 317 aaKnown RBP18.43■□□□□ 0.54
SDCBP-204ENST00000447182 LAMP1P11279 417 aa18.43■□□□□ 0.54
SDCBP-204ENST00000447182 PRKAR2AP13861 404 aaKnown RBP18.43■□□□□ 0.54
SDCBP-204ENST00000447182 PFN3P60673 137 aa18.43■□□□□ 0.54
SDCBP-204ENST00000447182 HKDC1Q2TB90 917 aa18.43■□□□□ 0.54
SDCBP-204ENST00000447182 COLEC12Q5KU26 742 aa18.43■□□□□ 0.54
SDCBP-204ENST00000447182 PLEKHS1Q5SXH7 462 aa18.43■□□□□ 0.54
SDCBP-204ENST00000447182 Q6ZNB5 142 aa18.43■□□□□ 0.54
SDCBP-204ENST00000447182 TSEN54Q7Z6J9 526 aaKnown RBP18.43■□□□□ 0.54
SDCBP-204ENST00000447182 METTL3Q86U44 580 aaKnown RBP18.43■□□□□ 0.54
SDCBP-204ENST00000447182 RNF175Q8N4F7 328 aa18.43■□□□□ 0.54
SDCBP-204ENST00000447182 PROX1Q92786 737 aa18.43■□□□□ 0.54
SDCBP-204ENST00000447182 MRPL9Q9BYD2 267 aaKnown RBP18.43■□□□□ 0.54
SDCBP-204ENST00000447182 RUBCNLQ9H714 662 aa18.43■□□□□ 0.54
SDCBP-204ENST00000447182 PPIL1Q9Y3C6 166 aa18.43■□□□□ 0.54
SDCBP-204ENST00000447182 DSCR3O14972 297 aa18.42■□□□□ 0.54
SDCBP-204ENST00000447182 SCAMP2O15127 329 aaKnown RBP18.42■□□□□ 0.54
SDCBP-204ENST00000447182 ADAMDEC1O15204 470 aa18.42■□□□□ 0.54
SDCBP-204ENST00000447182 EFEMP2O95967 443 aa18.42■□□□□ 0.54
SDCBP-204ENST00000447182 ITPKAP23677 461 aa18.42■□□□□ 0.54
SDCBP-204ENST00000447182 RGNQ15493 299 aa18.42■□□□□ 0.54
SDCBP-204ENST00000447182 TEAD4Q15561 434 aa18.42■□□□□ 0.54
SDCBP-204ENST00000447182 LRRC66Q68CR7 880 aa18.42■□□□□ 0.54
SDCBP-204ENST00000447182 CAMKMTQ7Z624 323 aa18.42■□□□□ 0.54
SDCBP-204ENST00000447182 NPAS4Q8IUM7 802 aa18.42■□□□□ 0.54
SDCBP-204ENST00000447182 VRK3Q8IV63 474 aa18.42■□□□□ 0.54
SDCBP-204ENST00000447182 FAM217AQ8IXS0 508 aa18.42■□□□□ 0.54
SDCBP-204ENST00000447182 KBTBD8Q8NFY9 601 aa18.42■□□□□ 0.54
SDCBP-204ENST00000447182 ADAMTS19Q8TE59 1207 aa18.42■□□□□ 0.54
SDCBP-204ENST00000447182 SKA2Q8WVK7 121 aaPredicted RBP18.42■□□□□ 0.54
SDCBP-204ENST00000447182 VOPP1Q96AW1 172 aa18.42■□□□□ 0.54
SDCBP-204ENST00000447182 SH3KBP1Q96B97 665 aa18.42■□□□□ 0.54
SDCBP-204ENST00000447182 CTRCQ99895 268 aa18.42■□□□□ 0.54
SDCBP-204ENST00000447182 CORO1BQ9BR76 489 aa18.42■□□□□ 0.54
SDCBP-204ENST00000447182 CDADC1Q9BWV3 514 aa18.42■□□□□ 0.54
SDCBP-204ENST00000447182 MAPRE3Q9UPY8 281 aa18.42■□□□□ 0.54
SDCBP-204ENST00000447182 BTBD3Q9Y2F9 522 aa18.42■□□□□ 0.54
SDCBP-204ENST00000447182 THSD7BQ9C0I4 1608 aa18.42■□□□□ 0.54
SDCBP-204ENST00000447182 TBX1O43435 398 aa18.41■□□□□ 0.54
SDCBP-204ENST00000447182 NUDT7P0C024 238 aa18.41■□□□□ 0.54
SDCBP-204ENST00000447182 CD22P20273 847 aa18.41■□□□□ 0.54
SDCBP-204ENST00000447182 PTX3P26022 381 aaPredicted RBP18.41■□□□□ 0.54
SDCBP-204ENST00000447182 IRF8Q02556 426 aa18.41■□□□□ 0.54
SDCBP-204ENST00000447182 KCNC3Q14003 757 aa18.41■□□□□ 0.54
SDCBP-204ENST00000447182 TAF12Q16514 161 aa18.41■□□□□ 0.54
SDCBP-204ENST00000447182 TPRG1LQ5T0D9 272 aa18.41■□□□□ 0.54
SDCBP-204ENST00000447182 RASGRP3Q8IV61 690 aa18.41■□□□□ 0.54
SDCBP-204ENST00000447182 CCDC103Q8IW40 242 aa18.41■□□□□ 0.54
SDCBP-204ENST00000447182 ASIC4Q96FT7 647 aa18.41■□□□□ 0.54
SDCBP-204ENST00000447182 FEVQ99581 238 aa18.41■□□□□ 0.54
SDCBP-204ENST00000447182 C6orf62Q9GZU0 229 aaPredicted RBP18.41■□□□□ 0.54
SDCBP-204ENST00000447182 NDUFAF4Q9P032 175 aa18.41■□□□□ 0.54
SDCBP-204ENST00000447182 LRFN2Q9ULH4 789 aa18.41■□□□□ 0.54
SDCBP-204ENST00000447182 ATP11BQ9Y2G3 1177 aa18.41■□□□□ 0.54
SDCBP-204ENST00000447182 TSC22D4Q9Y3Q8 395 aa18.41■□□□□ 0.54
SDCBP-204ENST00000447182 TESMINQ9Y4I5 508 aa18.41■□□□□ 0.54
SDCBP-204ENST00000447182 PCDHGA3Q9Y5H0 932 aa18.41■□□□□ 0.54
SDCBP-204ENST00000447182 HSD3B1P14060 373 aa18.41■□□□□ 0.54
SDCBP-204ENST00000447182 HSD3B2P26439 372 aa18.41■□□□□ 0.54
SDCBP-204ENST00000447182 ASMTP46597 345 aa18.41■□□□□ 0.54
SDCBP-204ENST00000447182 SELENOWP63302 87 aa18.41■□□□□ 0.54
SDCBP-204ENST00000447182 PTSQ03393 145 aa18.41■□□□□ 0.54
SDCBP-204ENST00000447182 PRKCZQ05513 592 aa18.41■□□□□ 0.54
SDCBP-204ENST00000447182 ACSM2AQ08AH3 577 aa18.41■□□□□ 0.54
SDCBP-204ENST00000447182 PPIGQ13427 754 aaKnown RBP eCLIP18.41■□□□□ 0.54
SDCBP-204ENST00000447182 ZDHHC20Q5W0Z9 365 aa18.41■□□□□ 0.54
SDCBP-204ENST00000447182 ACSM2BQ68CK6 577 aa18.41■□□□□ 0.54
SDCBP-204ENST00000447182 Q6ZPB1 254 aaPredicted RBP18.41■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 55.3 ms