RNA–Protein interactions for RNA: ENST00000442054.5

CDC42BPA-208, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 1 (best)

Gene CDC42BPA, Length 3,786 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-208ENST00000442054 VOPP1Q96AW1 172 aa7.14□□□□□ -1.27
CDC42BPA-208ENST00000442054 MPP4Q96JB8 637 aa7.14□□□□□ -1.27
CDC42BPA-208ENST00000442054 PPP1R36Q96LQ0 422 aa7.14□□□□□ -1.27
CDC42BPA-208ENST00000442054 SERPINI1Q99574 410 aa7.14□□□□□ -1.27
CDC42BPA-208ENST00000442054 CCM2Q9BSQ5 444 aa7.14□□□□□ -1.27
CDC42BPA-208ENST00000442054 ERVMER34-1Q9H9K5 563 aa7.14□□□□□ -1.27
CDC42BPA-208ENST00000442054 GPN2Q9H9Y4 310 aaPredicted RBP7.14□□□□□ -1.27
CDC42BPA-208ENST00000442054 SDR39U1Q9NRG7 319 aaPredicted RBP7.14□□□□□ -1.27
CDC42BPA-208ENST00000442054 GMEB1Q9Y692 573 aa7.14□□□□□ -1.27
CDC42BPA-208ENST00000442054 CSNK1G3Q9Y6M4 447 aa7.14□□□□□ -1.27
CDC42BPA-208ENST00000442054 PTPRSQ13332 1948 aa7.14□□□□□ -1.27
CDC42BPA-208ENST00000442054 SEC16AO15027 2179 aa7.13□□□□□ -1.27
CDC42BPA-208ENST00000442054 A0A0J9YVX5 310 aa7.13□□□□□ -1.27
CDC42BPA-208ENST00000442054 CCDC162PA2VCL2 907 aa7.13□□□□□ -1.27
CDC42BPA-208ENST00000442054 A6NCN8 305 aa7.13□□□□□ -1.27
CDC42BPA-208ENST00000442054 OR6C74A6NCV1 312 aa7.13□□□□□ -1.27
CDC42BPA-208ENST00000442054 TRPC5OSA6NMA1 111 aa7.13□□□□□ -1.27
CDC42BPA-208ENST00000442054 H6PDO95479 791 aa7.13□□□□□ -1.27
CDC42BPA-208ENST00000442054 GUCA1CO95843 209 aa7.13□□□□□ -1.27
CDC42BPA-208ENST00000442054 TSPAN12O95859 305 aa7.13□□□□□ -1.27
CDC42BPA-208ENST00000442054 GOT2P00505 430 aaKnown RBP7.13□□□□□ -1.27
CDC42BPA-208ENST00000442054 WNT1P04628 370 aa7.13□□□□□ -1.27
CDC42BPA-208ENST00000442054 PRKAR1AP10644 381 aa7.13□□□□□ -1.27
CDC42BPA-208ENST00000442054 GLB1P16278 677 aa7.13□□□□□ -1.27
CDC42BPA-208ENST00000442054 LHCGRP22888 699 aa7.13□□□□□ -1.27
CDC42BPA-208ENST00000442054 NFE2L1Q14494 772 aa7.13□□□□□ -1.27
CDC42BPA-208ENST00000442054 OR4D1Q15615 310 aa7.13□□□□□ -1.27
CDC42BPA-208ENST00000442054 PDCD2Q16342 344 aaPredicted RBP7.13□□□□□ -1.27
CDC42BPA-208ENST00000442054 TYSND1Q2T9J0 566 aa7.13□□□□□ -1.27
CDC42BPA-208ENST00000442054 CCDC81Q6ZN84 652 aa7.13□□□□□ -1.27
CDC42BPA-208ENST00000442054 ABI3BPQ7Z7G0 1075 aa7.13□□□□□ -1.27
CDC42BPA-208ENST00000442054 C11orf96Q7Z7L8 435 aa7.13□□□□□ -1.27
CDC42BPA-208ENST00000442054 TMPRSS12Q86WS5 348 aa7.13□□□□□ -1.27
CDC42BPA-208ENST00000442054 SLC35F3Q8IY50 421 aa7.13□□□□□ -1.27
CDC42BPA-208ENST00000442054 HM13Q8TCT9 377 aa7.13□□□□□ -1.27
CDC42BPA-208ENST00000442054 ROPN1LQ96C74 230 aa7.13□□□□□ -1.27
CDC42BPA-208ENST00000442054 DTNBP1Q96EV8 351 aa7.13□□□□□ -1.27
CDC42BPA-208ENST00000442054 TEX37Q96LM6 180 aa7.13□□□□□ -1.27
CDC42BPA-208ENST00000442054 DNAAF2Q9NVR5 837 aaKnown RBP7.13□□□□□ -1.27
CDC42BPA-208ENST00000442054 PCOLCE2Q9UKZ9 415 aa7.13□□□□□ -1.27
CDC42BPA-208ENST00000442054 DYRK1BQ9Y463 629 aa7.13□□□□□ -1.27
CDC42BPA-208ENST00000442054 AP4S1Q9Y587 144 aa7.13□□□□□ -1.27
CDC42BPA-208ENST00000442054 GPR45Q9Y5Y3 372 aa7.13□□□□□ -1.27
CDC42BPA-208ENST00000442054 OAS3Q9Y6K5 1087 aaKnown RBP7.13□□□□□ -1.27
CDC42BPA-208ENST00000442054 MED19A0JLT2 244 aaPredicted RBP7.13□□□□□ -1.27
CDC42BPA-208ENST00000442054 PSMD12O00232 456 aaPredicted RBP7.13□□□□□ -1.27
CDC42BPA-208ENST00000442054 FAM58BPP0C7Q3 252 aa7.13□□□□□ -1.27
CDC42BPA-208ENST00000442054 SLC6A2P23975 617 aa7.13□□□□□ -1.27
CDC42BPA-208ENST00000442054 NR1H2P55055 460 aa7.13□□□□□ -1.27
CDC42BPA-208ENST00000442054 ATP6V0D1P61421 351 aa7.13□□□□□ -1.27
CDC42BPA-208ENST00000442054 RALGDSQ12967 914 aa7.13□□□□□ -1.27
CDC42BPA-208ENST00000442054 SPATS1Q496A3 300 aa7.13□□□□□ -1.27
CDC42BPA-208ENST00000442054 KCTD21Q4G0X4 260 aa7.13□□□□□ -1.27
CDC42BPA-208ENST00000442054 SLC15A3Q8IY34 581 aa7.13□□□□□ -1.27
CDC42BPA-208ENST00000442054 NXPE1Q8N323 547 aa7.13□□□□□ -1.27
CDC42BPA-208ENST00000442054 SLC37A2Q8TED4 501 aa7.13□□□□□ -1.27
CDC42BPA-208ENST00000442054 FGF11Q92914 225 aa7.13□□□□□ -1.27
CDC42BPA-208ENST00000442054 NMD3Q96D46 503 aaKnown RBP7.13□□□□□ -1.27
CDC42BPA-208ENST00000442054 TSPAN17Q96FV3 270 aa7.13□□□□□ -1.27
CDC42BPA-208ENST00000442054 OSBPL11Q9BXB4 747 aa7.13□□□□□ -1.27
CDC42BPA-208ENST00000442054 GRIP2Q9C0E4 1043 aa7.13□□□□□ -1.27
CDC42BPA-208ENST00000442054 NTN4Q9HB63 628 aa7.13□□□□□ -1.27
CDC42BPA-208ENST00000442054 TUBA8Q9NY65 449 aaPredicted RBP7.13□□□□□ -1.27
CDC42BPA-208ENST00000442054 CD274Q9NZQ7 290 aa7.13□□□□□ -1.27
CDC42BPA-208ENST00000442054 PLEKHM1Q9Y4G2 1056 aa7.13□□□□□ -1.27
CDC42BPA-208ENST00000442054 LOXL2Q9Y4K0 774 aa7.13□□□□□ -1.27
CDC42BPA-208ENST00000442054 SPO11Q9Y5K1 396 aa7.13□□□□□ -1.27
CDC42BPA-208ENST00000442054 GFAPP14136 432 aa7.13□□□□□ -1.27
CDC42BPA-208ENST00000442054 RXRGP48443 463 aa7.13□□□□□ -1.27
CDC42BPA-208ENST00000442054 HERVK_113P63132 956 aa7.13□□□□□ -1.27
CDC42BPA-208ENST00000442054 ADARB1P78563 741 aaKnown RBP7.13□□□□□ -1.27
CDC42BPA-208ENST00000442054 PTSQ03393 145 aa7.13□□□□□ -1.27
CDC42BPA-208ENST00000442054 KIAA0040Q15053 153 aa7.13□□□□□ -1.27
CDC42BPA-208ENST00000442054 TMEM259Q4ZIN3 620 aa7.13□□□□□ -1.27
CDC42BPA-208ENST00000442054 ARHGAP40Q5TG30 622 aa7.13□□□□□ -1.27
CDC42BPA-208ENST00000442054 HECTD2Q5U5R9 776 aa7.13□□□□□ -1.27
CDC42BPA-208ENST00000442054 UNQ6494/PRO21346Q6UXR6 183 aa7.13□□□□□ -1.27
CDC42BPA-208ENST00000442054 PACRGLQ8N7B6 248 aa7.13□□□□□ -1.27
CDC42BPA-208ENST00000442054 SNX31Q8N9S9 440 aa7.13□□□□□ -1.27
CDC42BPA-208ENST00000442054 TMEM145Q8NBT3 493 aa7.13□□□□□ -1.27
CDC42BPA-208ENST00000442054 ASB12Q8WXK4 309 aa7.13□□□□□ -1.27
CDC42BPA-208ENST00000442054 TMEM125Q96AQ2 219 aa7.13□□□□□ -1.27
CDC42BPA-208ENST00000442054 PLEKHG4BQ96PX9 1271 aa7.13□□□□□ -1.27
CDC42BPA-208ENST00000442054 LGR4Q9BXB1 951 aa7.13□□□□□ -1.27
CDC42BPA-208ENST00000442054 ERVK-6Q9BXR3 956 aa7.13□□□□□ -1.27
CDC42BPA-208ENST00000442054 BRINP2Q9C0B6 783 aa7.13□□□□□ -1.27
CDC42BPA-208ENST00000442054 XKR8Q9H6D3 395 aa7.13□□□□□ -1.27
CDC42BPA-208ENST00000442054 AKTIPQ9H8T0 292 aa7.13□□□□□ -1.27
CDC42BPA-208ENST00000442054 POPDC3Q9HBV1 291 aa7.13□□□□□ -1.27
CDC42BPA-208ENST00000442054 SPAG4Q9NPE6 437 aa7.13□□□□□ -1.27
CDC42BPA-208ENST00000442054 IL26Q9NPH9 171 aa7.13□□□□□ -1.27
CDC42BPA-208ENST00000442054 TIMMDC1Q9NPL8 285 aa7.13□□□□□ -1.27
CDC42BPA-208ENST00000442054 PFDN4Q9NQP4 134 aa7.13□□□□□ -1.27
CDC42BPA-208ENST00000442054 SMOXQ9NWM0 555 aa7.13□□□□□ -1.27
CDC42BPA-208ENST00000442054 WWOXQ9NZC7 414 aa7.13□□□□□ -1.27
CDC42BPA-208ENST00000442054 RIMKLBQ9ULI2 386 aa7.13□□□□□ -1.27
CDC42BPA-208ENST00000442054 PTGDR2Q9Y5Y4 395 aa7.13□□□□□ -1.27
CDC42BPA-208ENST00000442054 CHD7Q9P2D1 2997 aa7.12□□□□□ -1.27
CDC42BPA-208ENST00000442054 SZT2Q5T011 3432 aa7.12□□□□□ -1.27
CDC42BPA-208ENST00000442054 ARHGAP10A1A4S6 786 aa7.12□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms