RNA–Protein interactions for RNA: ENST00000428962.2

THBS3-202, Transcript of thrombospondin 3, humanhuman

TSL 2

Gene THBS3, Length 1,833 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THBS3-202ENST00000428962 IL1RAPQ9NPH3 570 aa13.2□□□□□ -0.3
THBS3-202ENST00000428962 ATAD3AQ9NVI7 634 aa13.2□□□□□ -0.3
THBS3-202ENST00000428962 SIRT5Q9NXA8 310 aa13.2□□□□□ -0.3
THBS3-202ENST00000428962 UTS2RQ9UKP6 389 aa13.2□□□□□ -0.3
THBS3-202ENST00000428962 VPS4AQ9UN37 437 aa13.2□□□□□ -0.3
THBS3-202ENST00000428962 GPR34Q9UPC5 381 aa13.2□□□□□ -0.3
THBS3-202ENST00000428962 MUC22E2RYF6 1773 aaPredicted RBP13.2□□□□□ -0.3
THBS3-202ENST00000428962 KLHL33A6NCF5 533 aa13.2□□□□□ -0.3
THBS3-202ENST00000428962 PRRT4C9JH25 899 aa13.2□□□□□ -0.3
THBS3-202ENST00000428962 C1QTNF3-AMACRE9PGA6 284 aa13.2□□□□□ -0.3
THBS3-202ENST00000428962 NOBOXO60393 691 aa13.2□□□□□ -0.3
THBS3-202ENST00000428962 KCNK5O95279 499 aa13.2□□□□□ -0.3
THBS3-202ENST00000428962 CPNE6O95741 557 aa13.2□□□□□ -0.3
THBS3-202ENST00000428962 FABP3P05413 133 aa13.2□□□□□ -0.3
THBS3-202ENST00000428962 C1GALT1C1LP0DN25 315 aa13.2□□□□□ -0.3
THBS3-202ENST00000428962 LAMP1P11279 417 aa13.2□□□□□ -0.3
THBS3-202ENST00000428962 ELK4P28324 431 aa13.2□□□□□ -0.3
THBS3-202ENST00000428962 PCSK6P29122 969 aa13.2□□□□□ -0.3
THBS3-202ENST00000428962 KDELR2P33947 212 aa13.2□□□□□ -0.3
THBS3-202ENST00000428962 RPS13P62277 151 aaKnown RBP13.2□□□□□ -0.3
THBS3-202ENST00000428962 ZNF763Q0D2J5 394 aa13.2□□□□□ -0.3
THBS3-202ENST00000428962 KCNAB2Q13303 367 aa13.2□□□□□ -0.3
THBS3-202ENST00000428962 SPIDRQ14159 915 aa13.2□□□□□ -0.3
THBS3-202ENST00000428962 SLBPQ14493 270 aaKnown RBP eCLIP13.2□□□□□ -0.3
THBS3-202ENST00000428962 STARD3Q14849 445 aa13.2□□□□□ -0.3
THBS3-202ENST00000428962 RAB39AQ14964 217 aa13.2□□□□□ -0.3
THBS3-202ENST00000428962 HKDC1Q2TB90 917 aa13.2□□□□□ -0.3
THBS3-202ENST00000428962 OR2T5Q6IEZ7 315 aa13.2□□□□□ -0.3
THBS3-202ENST00000428962 UNC5DQ6UXZ4 953 aa13.2□□□□□ -0.3
THBS3-202ENST00000428962 TRMT11Q7Z4G4 463 aaKnown RBP13.2□□□□□ -0.3
THBS3-202ENST00000428962 CLECL1Q8IZS7 167 aa13.2□□□□□ -0.3
THBS3-202ENST00000428962 CPA6Q8N4T0 437 aa13.2□□□□□ -0.3
THBS3-202ENST00000428962 OR2T29Q8NH02 315 aa13.2□□□□□ -0.3
THBS3-202ENST00000428962 SH3KBP1Q96B97 665 aa13.2□□□□□ -0.3
THBS3-202ENST00000428962 COQ8BQ96D53 544 aa13.2□□□□□ -0.3
THBS3-202ENST00000428962 RSPRY1Q96DX4 576 aa13.2□□□□□ -0.3
THBS3-202ENST00000428962 MAGED4Q96JG8 741 aa13.2□□□□□ -0.3
THBS3-202ENST00000428962 TPT1P8Q9HAU6 139 aa13.2□□□□□ -0.3
THBS3-202ENST00000428962 TMEM9Q9P0T7 183 aa13.2□□□□□ -0.3
THBS3-202ENST00000428962 ZNF282Q9UDV7 671 aaPredicted RBP13.2□□□□□ -0.3
THBS3-202ENST00000428962 CIDEBQ9UHD4 219 aa13.2□□□□□ -0.3
THBS3-202ENST00000428962 TRIOBPQ9H2D6 2365 aa13.19□□□□□ -0.3
THBS3-202ENST00000428962 RNASET2O00584 256 aaKnown RBP13.19□□□□□ -0.3
THBS3-202ENST00000428962 ETHE1O95571 254 aa13.19□□□□□ -0.3
THBS3-202ENST00000428962 ITGAMP11215 1152 aa13.19□□□□□ -0.3
THBS3-202ENST00000428962 HLA-EP13747 358 aa13.19□□□□□ -0.3
THBS3-202ENST00000428962 JUNBP17275 347 aaPredicted RBP13.19□□□□□ -0.3
THBS3-202ENST00000428962 DCKP27707 260 aa13.19□□□□□ -0.3
THBS3-202ENST00000428962 VIPR2P41587 438 aa13.19□□□□□ -0.3
THBS3-202ENST00000428962 SKIV2LQ15477 1246 aaKnown RBP13.19□□□□□ -0.3
THBS3-202ENST00000428962 EIF3MQ7L2H7 374 aaKnown RBP13.19□□□□□ -0.3
THBS3-202ENST00000428962 ZNF551Q7Z340 670 aaPredicted RBP13.19□□□□□ -0.3
THBS3-202ENST00000428962 R3HCC1LQ7Z5L2 792 aaKnown RBP13.19□□□□□ -0.3
THBS3-202ENST00000428962 TRIM74Q86UV6 250 aa13.19□□□□□ -0.3
THBS3-202ENST00000428962 LAS2Q8IYD9 372 aa13.19□□□□□ -0.3
THBS3-202ENST00000428962 SETD9Q8NE22 299 aa13.19□□□□□ -0.3
THBS3-202ENST00000428962 GPR156Q8NFN8 814 aa13.19□□□□□ -0.3
THBS3-202ENST00000428962 OR2L2Q8NH16 312 aa13.19□□□□□ -0.3
THBS3-202ENST00000428962 CXorf40AQ8TE69 158 aa13.19□□□□□ -0.3
THBS3-202ENST00000428962 RAB7BQ96AH8 199 aa13.19□□□□□ -0.3
THBS3-202ENST00000428962 BHLHE41Q9C0J9 482 aaPredicted RBP13.19□□□□□ -0.3
THBS3-202ENST00000428962 ADNPQ9H2P0 1102 aa13.19□□□□□ -0.3
THBS3-202ENST00000428962 CCDC177Q9NQR7 707 aaPredicted RBP13.19□□□□□ -0.3
THBS3-202ENST00000428962 ATXN10Q9UBB4 475 aa13.19□□□□□ -0.3
THBS3-202ENST00000428962 ATP6V1HQ9UI12 483 aa13.19□□□□□ -0.3
THBS3-202ENST00000428962 PIPSLA2A3N6 862 aa13.18□□□□□ -0.3
THBS3-202ENST00000428962 GABRR3A8MPY1 467 aa13.18□□□□□ -0.3
THBS3-202ENST00000428962 MMP20O60882 483 aa13.18□□□□□ -0.3
THBS3-202ENST00000428962 ABCB7O75027 752 aa13.18□□□□□ -0.3
THBS3-202ENST00000428962 ABCB1P08183 1280 aaPredicted RBP13.18□□□□□ -0.3
THBS3-202ENST00000428962 CRHBPP24387 322 aa13.18□□□□□ -0.3
THBS3-202ENST00000428962 IGFBP5P24593 272 aa13.18□□□□□ -0.3
THBS3-202ENST00000428962 YAP1P46937 504 aaKnown RBP13.18□□□□□ -0.3
THBS3-202ENST00000428962 RXRGP48443 463 aa13.18□□□□□ -0.3
THBS3-202ENST00000428962 METAP1P53582 386 aa13.18□□□□□ -0.3
THBS3-202ENST00000428962 PMS2P3Q13401 168 aa13.18□□□□□ -0.3
THBS3-202ENST00000428962 TSTA3Q13630 321 aaPredicted RBP13.18□□□□□ -0.3
THBS3-202ENST00000428962 ZNF234Q14588 700 aa13.18□□□□□ -0.3
THBS3-202ENST00000428962 PDGFRLQ15198 375 aa13.18□□□□□ -0.3
THBS3-202ENST00000428962 TEAD4Q15561 434 aa13.18□□□□□ -0.3
THBS3-202ENST00000428962 ANKRD26P1Q6NSI1 321 aa13.18□□□□□ -0.3
THBS3-202ENST00000428962 CBLL1Q75N03 491 aa13.18□□□□□ -0.3
THBS3-202ENST00000428962 ERN2Q76MJ5 926 aaKnown RBP13.18□□□□□ -0.3
THBS3-202ENST00000428962 HORMAD1Q86X24 394 aa13.18□□□□□ -0.3
THBS3-202ENST00000428962 PTOV1Q86YD1 416 aa13.18□□□□□ -0.3
THBS3-202ENST00000428962 HS3ST5Q8IZT8 346 aa13.18□□□□□ -0.3
THBS3-202ENST00000428962 SYNPOQ8N3V7 929 aa13.18□□□□□ -0.3
THBS3-202ENST00000428962 SETD7Q8WTS6 366 aaKnown RBP13.18□□□□□ -0.3
THBS3-202ENST00000428962 SLC5A11Q8WWX8 675 aa13.18□□□□□ -0.3
THBS3-202ENST00000428962 AMBRA1Q9C0C7 1298 aa13.18□□□□□ -0.3
THBS3-202ENST00000428962 DMRT3Q9NQL9 472 aa13.18□□□□□ -0.3
THBS3-202ENST00000428962 GULP1Q9UBP9 304 aa13.18□□□□□ -0.3
THBS3-202ENST00000428962 KIAA1549LQ6ZVL6 1849 aa13.18□□□□□ -0.3
THBS3-202ENST00000428962 LOC100130705A0A1B0GUX0 176 aa13.18□□□□□ -0.3
THBS3-202ENST00000428962 C1orf226A1L170 272 aa13.18□□□□□ -0.3
THBS3-202ENST00000428962 K7ESM1 405 aa13.18□□□□□ -0.3
THBS3-202ENST00000428962 SLC16A6O15403 523 aa13.18□□□□□ -0.3
THBS3-202ENST00000428962 PI15O43692 258 aa13.18□□□□□ -0.3
THBS3-202ENST00000428962 UGT2B11O75310 529 aa13.18□□□□□ -0.3
THBS3-202ENST00000428962 POP7O75817 140 aaKnown RBP13.18□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms