RNA–Protein interactions for RNA: ENST00000428726.6

CD44-208, Transcript of CD44 molecule (Indian blood group), humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CD44, Length 3,046 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-208ENST00000428726 TNFAIP8L2Q6P589 184 aaPredicted RBP8.08□□□□□ -1.12
CD44-208ENST00000428726 KCTD8Q6ZWB6 473 aa8.08□□□□□ -1.12
CD44-208ENST00000428726 TMEFF1Q8IYR6 380 aa8.08□□□□□ -1.12
CD44-208ENST00000428726 CBARPQ8N350 705 aaPredicted RBP8.08□□□□□ -1.12
CD44-208ENST00000428726 ZNF480Q8WV37 535 aa8.08□□□□□ -1.12
CD44-208ENST00000428726 ASZ1Q8WWH4 475 aa8.08□□□□□ -1.12
CD44-208ENST00000428726 ARMC5Q96C12 935 aa8.08□□□□□ -1.12
CD44-208ENST00000428726 CENPNQ96H22 339 aaPredicted RBP8.08□□□□□ -1.12
CD44-208ENST00000428726 TOX2Q96NM4 488 aa8.08□□□□□ -1.12
CD44-208ENST00000428726 RUBCNLQ9H714 662 aa8.08□□□□□ -1.12
CD44-208ENST00000428726 CLK4Q9HAZ1 481 aaKnown RBP8.08□□□□□ -1.12
CD44-208ENST00000428726 IL23AQ9NPF7 189 aa8.08□□□□□ -1.12
CD44-208ENST00000428726 MBNL1Q9NR56 388 aaKnown RBP8.08□□□□□ -1.12
CD44-208ENST00000428726 HEBP1Q9NRV9 189 aa8.08□□□□□ -1.12
CD44-208ENST00000428726 DNAJC11Q9NVH1 559 aa8.08□□□□□ -1.12
CD44-208ENST00000428726 DEC1Q9P2X7 70 aa8.08□□□□□ -1.12
CD44-208ENST00000428726 TAC3Q9UHF0 121 aa8.08□□□□□ -1.12
CD44-208ENST00000428726 NEUROG3Q9Y4Z2 214 aa8.08□□□□□ -1.12
CD44-208ENST00000428726 ST14Q9Y5Y6 855 aa8.08□□□□□ -1.12
CD44-208ENST00000428726 TRBV5-4A0A0C4DH59 114 aa8.08□□□□□ -1.12
CD44-208ENST00000428726 TCRBV5S2A0A599 114 aa8.08□□□□□ -1.12
CD44-208ENST00000428726 EPOPA6NHQ4 379 aa8.08□□□□□ -1.12
CD44-208ENST00000428726 GABRR3A8MPY1 467 aa8.08□□□□□ -1.12
CD44-208ENST00000428726 PCDH7O60245 1069 aa8.08□□□□□ -1.12
CD44-208ENST00000428726 CREG1O75629 220 aa8.08□□□□□ -1.12
CD44-208ENST00000428726 CDH1P12830 882 aa8.08□□□□□ -1.12
CD44-208ENST00000428726 IMPA1P29218 277 aa8.08□□□□□ -1.12
CD44-208ENST00000428726 GJA8P48165 433 aa8.08□□□□□ -1.12
CD44-208ENST00000428726 PTPN5P54829 565 aa8.08□□□□□ -1.12
CD44-208ENST00000428726 TBPL1P62380 186 aa8.08□□□□□ -1.12
CD44-208ENST00000428726 ESRRGP62508 458 aa8.08□□□□□ -1.12
CD44-208ENST00000428726 MAPK11Q15759 364 aa8.08□□□□□ -1.12
CD44-208ENST00000428726 PRSS53Q2L4Q9 553 aa8.08□□□□□ -1.12
CD44-208ENST00000428726 ZNF385BQ569K4 471 aa8.08□□□□□ -1.12
CD44-208ENST00000428726 RPS26P11Q5JNZ5 115 aaPredicted RBP8.08□□□□□ -1.12
CD44-208ENST00000428726 MACC1Q6ZN28 852 aa8.08□□□□□ -1.12
CD44-208ENST00000428726 PTRH1Q86Y79 214 aaKnown RBP8.08□□□□□ -1.12
CD44-208ENST00000428726 NAGSQ8N159 534 aa8.08□□□□□ -1.12
CD44-208ENST00000428726 PACRGLQ8N7B6 248 aa8.08□□□□□ -1.12
CD44-208ENST00000428726 GLYATL1Q969I3 302 aa8.08□□□□□ -1.12
CD44-208ENST00000428726 PPP3R2Q96LZ3 170 aa8.08□□□□□ -1.12
CD44-208ENST00000428726 SMAD5Q99717 465 aaKnown RBP8.08□□□□□ -1.12
CD44-208ENST00000428726 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP8.08□□□□□ -1.12
CD44-208ENST00000428726 SELENONQ9NZV5 590 aa8.08□□□□□ -1.12
CD44-208ENST00000428726 PADI4Q9UM07 663 aa8.08□□□□□ -1.12
CD44-208ENST00000428726 SLC6A14Q9UN76 642 aa8.08□□□□□ -1.12
CD44-208ENST00000428726 DOCK8Q8NF50 2099 aa8.08□□□□□ -1.12
CD44-208ENST00000428726 CACNA1CQ13936 2221 aa8.07□□□□□ -1.12
CD44-208ENST00000428726 MGAT4DA6NG13 374 aa8.07□□□□□ -1.12
CD44-208ENST00000428726 G3V2T6 193 aa8.07□□□□□ -1.12
CD44-208ENST00000428726 CLIC1O00299 241 aa8.07□□□□□ -1.12
CD44-208ENST00000428726 WNT9AO14904 365 aa8.07□□□□□ -1.12
CD44-208ENST00000428726 VIPP01282 170 aa8.07□□□□□ -1.12
CD44-208ENST00000428726 UMPSP11172 480 aa8.07□□□□□ -1.12
CD44-208ENST00000428726 FCGR1AP12314 374 aa8.07□□□□□ -1.12
CD44-208ENST00000428726 CYP2A7P20853 494 aa8.07□□□□□ -1.12
CD44-208ENST00000428726 MAP2K4P45985 399 aa8.07□□□□□ -1.12
CD44-208ENST00000428726 RXRGP48443 463 aa8.07□□□□□ -1.12
CD44-208ENST00000428726 SH3BGRP55822 239 aaPredicted RBP8.07□□□□□ -1.12
CD44-208ENST00000428726 DLX2Q07687 328 aaPredicted RBP8.07□□□□□ -1.12
CD44-208ENST00000428726 SRSF5Q13243 272 aaKnown RBP8.07□□□□□ -1.12
CD44-208ENST00000428726 GPM6BQ13491 265 aa8.07□□□□□ -1.12
CD44-208ENST00000428726 APOFQ13790 326 aa8.07□□□□□ -1.12
CD44-208ENST00000428726 KIAA0040Q15053 153 aa8.07□□□□□ -1.12
CD44-208ENST00000428726 ADRM1Q16186 407 aa8.07□□□□□ -1.12
CD44-208ENST00000428726 UGT8Q16880 541 aa8.07□□□□□ -1.12
CD44-208ENST00000428726 GPR153Q6NV75 609 aa8.07□□□□□ -1.12
CD44-208ENST00000428726 METTL2BQ6P1Q9 378 aaKnown RBP8.07□□□□□ -1.12
CD44-208ENST00000428726 ELMSAN1Q6PJG2 1045 aa8.07□□□□□ -1.12
CD44-208ENST00000428726 TFAP2CQ92754 450 aa8.07□□□□□ -1.12
CD44-208ENST00000428726 F2RL3Q96RI0 385 aa8.07□□□□□ -1.12
CD44-208ENST00000428726 RAD9AQ99638 391 aa8.07□□□□□ -1.12
CD44-208ENST00000428726 POLE4Q9NR33 117 aa8.07□□□□□ -1.12
CD44-208ENST00000428726 CORINQ9Y5Q5 1042 aa8.07□□□□□ -1.12
CD44-208ENST00000428726 ASXL3Q9C0F0 2248 aa8.07□□□□□ -1.12
CD44-208ENST00000428726 OBSL1O75147 1896 aa8.07□□□□□ -1.12
CD44-208ENST00000428726 CXorf51AA0A1B0GTR3 108 aa8.07□□□□□ -1.12
CD44-208ENST00000428726 A8MU76 341 aa8.07□□□□□ -1.12
CD44-208ENST00000428726 CFAP99D6REC4 459 aa8.07□□□□□ -1.12
CD44-208ENST00000428726 C6orf47O95873 294 aa8.07□□□□□ -1.12
CD44-208ENST00000428726 ENO2P09104 434 aaPredicted RBP8.07□□□□□ -1.12
CD44-208ENST00000428726 MATN1P21941 496 aa8.07□□□□□ -1.12
CD44-208ENST00000428726 HTR1EP28566 365 aa8.07□□□□□ -1.12
CD44-208ENST00000428726 VIPR1P32241 457 aa8.07□□□□□ -1.12
CD44-208ENST00000428726 KIR3DL1P43629 444 aa8.07□□□□□ -1.12
CD44-208ENST00000428726 TAS2R50P59544 299 aa8.07□□□□□ -1.12
CD44-208ENST00000428726 VLDLRP98155 873 aa8.07□□□□□ -1.12
CD44-208ENST00000428726 CREMQ03060 361 aa8.07□□□□□ -1.12
CD44-208ENST00000428726 HSPB3Q12988 150 aa8.07□□□□□ -1.12
CD44-208ENST00000428726 KCNAB2Q13303 367 aa8.07□□□□□ -1.12
CD44-208ENST00000428726 GAB1Q13480 694 aa8.07□□□□□ -1.12
CD44-208ENST00000428726 RAB39AQ14964 217 aa8.07□□□□□ -1.12
CD44-208ENST00000428726 CYBRD1Q53TN4 286 aa8.07□□□□□ -1.12
CD44-208ENST00000428726 INTS11Q5TA45 600 aaKnown RBP8.07□□□□□ -1.12
CD44-208ENST00000428726 TMEM236Q5W0B7 351 aa8.07□□□□□ -1.12
CD44-208ENST00000428726 KIAA1211LQ6NV74 962 aa8.07□□□□□ -1.12
CD44-208ENST00000428726 HEATR4Q86WZ0 1026 aa8.07□□□□□ -1.12
CD44-208ENST00000428726 CARM1Q86X55 608 aa8.07□□□□□ -1.12
CD44-208ENST00000428726 ZDHHC13Q8IUH4 622 aa8.07□□□□□ -1.12
CD44-208ENST00000428726 ZNF547Q8IVP9 402 aa8.07□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms