RNA–Protein interactions for RNA: ENST00000417448.1

VCP-202, Transcript of valosin containing protein, humanhuman

TSL 3

Gene VCP, Length 722 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCP-202ENST00000417448 PSMB5P28074 263 aa17.14■□□□□ 0.33
VCP-202ENST00000417448 SHMT2P34897 504 aa17.14■□□□□ 0.33
VCP-202ENST00000417448 SKIV2L2P42285 1042 aaKnown RBP17.14■□□□□ 0.33
VCP-202ENST00000417448 YBX1P67809 324 aaKnown RBP17.14■□□□□ 0.33
VCP-202ENST00000417448 AIMP2Q13155 320 aaKnown RBP17.14■□□□□ 0.33
VCP-202ENST00000417448 TSTA3Q13630 321 aaPredicted RBP17.14■□□□□ 0.33
VCP-202ENST00000417448 USP10Q14694 798 aaKnown RBP17.14■□□□□ 0.33
VCP-202ENST00000417448 CYP2A13Q16696 494 aa17.14■□□□□ 0.33
VCP-202ENST00000417448 ZNF324BQ6AW86 544 aaPredicted RBP17.14■□□□□ 0.33
VCP-202ENST00000417448 TTC23LQ6PF05 361 aa17.14■□□□□ 0.33
VCP-202ENST00000417448 FAM180AQ6UWF9 173 aa17.14■□□□□ 0.33
VCP-202ENST00000417448 CDHR3Q6ZTQ4 885 aa17.14■□□□□ 0.33
VCP-202ENST00000417448 CMC1Q7Z7K0 106 aa17.14■□□□□ 0.33
VCP-202ENST00000417448 RELL1Q8IUW5 271 aa17.14■□□□□ 0.33
VCP-202ENST00000417448 FLVCR1-AS1Q8TAF5 88 aa17.14■□□□□ 0.33
VCP-202ENST00000417448 RAD51AP1Q96B01 352 aa17.14■□□□□ 0.33
VCP-202ENST00000417448 PITPNM3Q9BZ71 974 aa17.14■□□□□ 0.33
VCP-202ENST00000417448 SLC6A20Q9NP91 592 aa17.14■□□□□ 0.33
VCP-202ENST00000417448 SERTAD3Q9UJW9 196 aa17.14■□□□□ 0.33
VCP-202ENST00000417448 CORO1CQ9ULV4 474 aaPredicted RBP17.14■□□□□ 0.33
VCP-202ENST00000417448 POC1B-GALNT4F8VUJ3 575 aa17.13■□□□□ 0.33
VCP-202ENST00000417448 CDC7O00311 574 aa17.13■□□□□ 0.33
VCP-202ENST00000417448 RASGRF2O14827 1237 aa17.13■□□□□ 0.33
VCP-202ENST00000417448 PCDH17O14917 1159 aa17.13■□□□□ 0.33
VCP-202ENST00000417448 HCRTR1O43613 425 aa17.13■□□□□ 0.33
VCP-202ENST00000417448 CATP04040 527 aaKnown RBP17.13■□□□□ 0.33
VCP-202ENST00000417448 RPN2P04844 631 aa17.13■□□□□ 0.33
VCP-202ENST00000417448 HOXB4P17483 251 aaPredicted RBP17.13■□□□□ 0.33
VCP-202ENST00000417448 CD9P21926 228 aa17.13■□□□□ 0.33
VCP-202ENST00000417448 PHBP35232 272 aa17.13■□□□□ 0.33
VCP-202ENST00000417448 SPRP35270 261 aaPredicted RBP17.13■□□□□ 0.33
VCP-202ENST00000417448 RGS4P49798 205 aa17.13■□□□□ 0.33
VCP-202ENST00000417448 RAB28P51157 221 aa17.13■□□□□ 0.33
VCP-202ENST00000417448 IL2P60568 153 aa17.13■□□□□ 0.33
VCP-202ENST00000417448 SLMAPQ14BN4 828 aa17.13■□□□□ 0.33
VCP-202ENST00000417448 GRTP1Q5TC63 336 aa17.13■□□□□ 0.33
VCP-202ENST00000417448 MRPL14Q6P1L8 145 aaKnown RBP17.13■□□□□ 0.33
VCP-202ENST00000417448 SUSD1Q6UWL2 747 aa17.13■□□□□ 0.33
VCP-202ENST00000417448 CEP128Q6ZU80 1094 aa17.13■□□□□ 0.33
VCP-202ENST00000417448 NEK10Q6ZWH5 1172 aa17.13■□□□□ 0.33
VCP-202ENST00000417448 CDH24Q86UP0 819 aa17.13■□□□□ 0.33
VCP-202ENST00000417448 MYO1HQ8N1T3 1032 aa17.13■□□□□ 0.33
VCP-202ENST00000417448 ZNF808Q8N4W9 903 aaPredicted RBP17.13■□□□□ 0.33
VCP-202ENST00000417448 OR9A1PQ8NGU1 263 aa17.13■□□□□ 0.33
VCP-202ENST00000417448 PTERQ96BW5 349 aa17.13■□□□□ 0.33
VCP-202ENST00000417448 GPR22Q99680 433 aa17.13■□□□□ 0.33
VCP-202ENST00000417448 TSPYL1Q9H0U9 437 aa17.13■□□□□ 0.33
VCP-202ENST00000417448 ACSS3Q9H6R3 686 aa17.13■□□□□ 0.33
VCP-202ENST00000417448 FBXL4Q9UKA2 621 aa17.13■□□□□ 0.33
VCP-202ENST00000417448 HMX2A2RU54 273 aa17.12■□□□□ 0.33
VCP-202ENST00000417448 NPEPPSL1A6NEC2 478 aa17.12■□□□□ 0.33
VCP-202ENST00000417448 C2orf74A8MZ97 194 aa17.12■□□□□ 0.33
VCP-202ENST00000417448 C19orf84I3L1E1 186 aa17.12■□□□□ 0.33
VCP-202ENST00000417448 GFYI3L273 518 aa17.12■□□□□ 0.33
VCP-202ENST00000417448 CTSBP07858 339 aa17.12■□□□□ 0.33
VCP-202ENST00000417448 HBQ1P09105 142 aa17.12■□□□□ 0.33
VCP-202ENST00000417448 ENO3P13929 434 aaPredicted RBP17.12■□□□□ 0.33
VCP-202ENST00000417448 SLC12A2P55011 1212 aa17.12■□□□□ 0.33
VCP-202ENST00000417448 VSNL1P62760 191 aa17.12■□□□□ 0.33
VCP-202ENST00000417448 TLR1Q15399 786 aa17.12■□□□□ 0.33
VCP-202ENST00000417448 ZIC1Q15915 447 aa17.12■□□□□ 0.33
VCP-202ENST00000417448 PHKG1Q16816 387 aa17.12■□□□□ 0.33
VCP-202ENST00000417448 ERCC6LQ2NKX8 1250 aa17.12■□□□□ 0.33
VCP-202ENST00000417448 VWA2Q5GFL6 755 aa17.12■□□□□ 0.33
VCP-202ENST00000417448 MROH9Q5TGP6 573 aa17.12■□□□□ 0.33
VCP-202ENST00000417448 PRAMEF13Q5VWM6 474 aa17.12■□□□□ 0.33
VCP-202ENST00000417448 SPESP1Q6UW49 350 aa17.12■□□□□ 0.33
VCP-202ENST00000417448 BCORP1Q8N888 145 aa17.12■□□□□ 0.33
VCP-202ENST00000417448 CATSPER1Q8NEC5 780 aa17.12■□□□□ 0.33
VCP-202ENST00000417448 OR2L8Q8NGY9 312 aa17.12■□□□□ 0.33
VCP-202ENST00000417448 CYTH2Q99418 400 aa17.12■□□□□ 0.33
VCP-202ENST00000417448 C17orf62Q9BQA9 187 aa17.12■□□□□ 0.33
VCP-202ENST00000417448 ACAT2Q9BWD1 397 aa17.12■□□□□ 0.33
VCP-202ENST00000417448 TXLNGYQ9BZA5 131 aa17.12■□□□□ 0.33
VCP-202ENST00000417448 EPB41L4BQ9H329 900 aa17.12■□□□□ 0.33
VCP-202ENST00000417448 GPAMQ9HCL2 828 aa17.12■□□□□ 0.33
VCP-202ENST00000417448 IFT80Q9P2H3 777 aaPredicted RBP17.12■□□□□ 0.33
VCP-202ENST00000417448 GPN3Q9UHW5 284 aaPredicted RBP17.12■□□□□ 0.33
VCP-202ENST00000417448 PDE10AQ9Y233 779 aa17.12■□□□□ 0.33
VCP-202ENST00000417448 ZBTB14O43829 449 aa17.11■□□□□ 0.33
VCP-202ENST00000417448 ZNF37AP17032 561 aaPredicted RBP17.11■□□□□ 0.33
VCP-202ENST00000417448 CCNFP41002 786 aa17.11■□□□□ 0.33
VCP-202ENST00000417448 POU4F1Q01851 419 aa17.11■□□□□ 0.33
VCP-202ENST00000417448 AGAP7PQ5VUJ5 663 aa17.11■□□□□ 0.33
VCP-202ENST00000417448 FCRL6Q6DN72 434 aa17.11■□□□□ 0.33
VCP-202ENST00000417448 RHBDD2Q6NTF9 364 aa17.11■□□□□ 0.33
VCP-202ENST00000417448 AGAP4Q96P64 663 aa17.11■□□□□ 0.33
VCP-202ENST00000417448 TAAR6Q96RI8 345 aa17.11■□□□□ 0.33
VCP-202ENST00000417448 FAM60AQ9NP50 221 aa17.11■□□□□ 0.33
VCP-202ENST00000417448 UTP6Q9NYH9 597 aaKnown RBP17.11■□□□□ 0.33
VCP-202ENST00000417448 OR6C2Q9NZP2 312 aa17.11■□□□□ 0.33
VCP-202ENST00000417448 DHCR7Q9UBM7 475 aaKnown RBP17.11■□□□□ 0.33
VCP-202ENST00000417448 NDOR1Q9UHB4 597 aa17.11■□□□□ 0.33
VCP-202ENST00000417448 TRGV8A0A0C4DH27 118 aa17.1■□□□□ 0.33
VCP-202ENST00000417448 A0A1W2PPV9 198 aa17.1■□□□□ 0.33
VCP-202ENST00000417448 MYO1CO00159 1063 aa17.1■□□□□ 0.33
VCP-202ENST00000417448 RIPK2O43353 540 aa17.1■□□□□ 0.33
VCP-202ENST00000417448 NRP2O60462 931 aa17.1■□□□□ 0.33
VCP-202ENST00000417448 WISP3O95389 354 aaPredicted RBP17.1■□□□□ 0.33
VCP-202ENST00000417448 GUCA1CO95843 209 aa17.1■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 57 ms