RNA–Protein interactions for RNA: ENST00000414978.5

MCF2-204, Transcript of MCF.2 cell line derived transforming sequence, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene MCF2, Length 3,813 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2-204ENST00000414978 MTCP1P56278 107 aa2.46□□□□□ -2.02
MCF2-204ENST00000414978 CLDN15P56746 228 aa2.46□□□□□ -2.02
MCF2-204ENST00000414978 GSDMDP57764 484 aa2.46□□□□□ -2.02
MCF2-204ENST00000414978 SRP54P61011 504 aaKnown RBP2.46□□□□□ -2.02
MCF2-204ENST00000414978 ISL1P61371 349 aa2.46□□□□□ -2.02
MCF2-204ENST00000414978 SPAG1Q07617 926 aa2.46□□□□□ -2.02
MCF2-204ENST00000414978 MRPL28Q13084 256 aaKnown RBP2.46□□□□□ -2.02
MCF2-204ENST00000414978 MAB21L1Q13394 359 aa2.46□□□□□ -2.02
MCF2-204ENST00000414978 SMTNL2Q2TAL5 461 aa2.46□□□□□ -2.02
MCF2-204ENST00000414978 KCTD21Q4G0X4 260 aa2.46□□□□□ -2.02
MCF2-204ENST00000414978 DNTTIP2Q5QJE6 756 aaKnown RBP2.46□□□□□ -2.02
MCF2-204ENST00000414978 TEDDM1Q5T9Z0 273 aa2.46□□□□□ -2.02
MCF2-204ENST00000414978 IGFN1Q86VF2 1251 aa2.46□□□□□ -2.02
MCF2-204ENST00000414978 FOXP4Q8IVH2 680 aaPredicted RBP2.46□□□□□ -2.02
MCF2-204ENST00000414978 SIAH3Q8IW03 269 aa2.46□□□□□ -2.02
MCF2-204ENST00000414978 UEVLDQ8IX04 471 aa2.46□□□□□ -2.02
MCF2-204ENST00000414978 TMEM105Q8N8V8 129 aa2.46□□□□□ -2.02
MCF2-204ENST00000414978 SUMF1Q8NBK3 374 aa2.46□□□□□ -2.02
MCF2-204ENST00000414978 SMRP1Q8NCR6 262 aa2.46□□□□□ -2.02
MCF2-204ENST00000414978 P2RX5Q93086 422 aa2.46□□□□□ -2.02
MCF2-204ENST00000414978 RFT1Q96AA3 541 aa2.46□□□□□ -2.02
MCF2-204ENST00000414978 MIB2Q96AX9 1013 aa2.46□□□□□ -2.02
MCF2-204ENST00000414978 GLT1D1Q96MS3 346 aa2.46□□□□□ -2.02
MCF2-204ENST00000414978 FN3KQ9H479 309 aa2.46□□□□□ -2.02
MCF2-204ENST00000414978 GPN1Q9HCN4 374 aaPredicted RBP2.46□□□□□ -2.02
MCF2-204ENST00000414978 NOX4Q9NPH5 578 aa2.46□□□□□ -2.02
MCF2-204ENST00000414978 PHPT1Q9NRX4 125 aaPredicted RBP2.46□□□□□ -2.02
MCF2-204ENST00000414978 NRBP2Q9NSY0 501 aa2.46□□□□□ -2.02
MCF2-204ENST00000414978 TMED5Q9Y3A6 229 aa2.46□□□□□ -2.02
MCF2-204ENST00000414978 TCRBV5S1A1TA0A578 114 aa2.45□□□□□ -2.02
MCF2-204ENST00000414978 ANXA2P2A6NMY6 339 aa2.45□□□□□ -2.02
MCF2-204ENST00000414978 INPPL1O15357 1258 aa2.45□□□□□ -2.02
MCF2-204ENST00000414978 PLAUP00749 431 aa2.45□□□□□ -2.02
MCF2-204ENST00000414978 KRT6BP04259 564 aa2.45□□□□□ -2.02
MCF2-204ENST00000414978 ABHD2P08910 425 aa2.45□□□□□ -2.02
MCF2-204ENST00000414978 UNGP13051 313 aaPredicted RBP2.45□□□□□ -2.02
MCF2-204ENST00000414978 AOC1P19801 751 aa2.45□□□□□ -2.02
MCF2-204ENST00000414978 KRT6CP48668 564 aa2.45□□□□□ -2.02
MCF2-204ENST00000414978 NR0B1P51843 470 aaKnown RBP2.45□□□□□ -2.02
MCF2-204ENST00000414978 GBX2P52951 348 aaPredicted RBP2.45□□□□□ -2.02
MCF2-204ENST00000414978 HMGCS2P54868 508 aa2.45□□□□□ -2.02
MCF2-204ENST00000414978 NXPH1P58417 271 aa2.45□□□□□ -2.02
MCF2-204ENST00000414978 SIM1P81133 766 aaPredicted RBP2.45□□□□□ -2.02
MCF2-204ENST00000414978 MTX1Q13505 466 aa2.45□□□□□ -2.02
MCF2-204ENST00000414978 CUL2Q13617 745 aa2.45□□□□□ -2.02
MCF2-204ENST00000414978 VEZF1Q14119 521 aa2.45□□□□□ -2.02
MCF2-204ENST00000414978 NONOQ15233 471 aaKnown RBP eCLIP2.45□□□□□ -2.02
MCF2-204ENST00000414978 LACTB2Q53H82 288 aaPredicted RBP2.45□□□□□ -2.02
MCF2-204ENST00000414978 KIAA1755Q5JYT7 1200 aa2.45□□□□□ -2.02
MCF2-204ENST00000414978 TMEM71Q6P5X7 295 aa2.45□□□□□ -2.02
MCF2-204ENST00000414978 SERINC5Q86VE9 423 aa2.45□□□□□ -2.02
MCF2-204ENST00000414978 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP2.45□□□□□ -2.02
MCF2-204ENST00000414978 ARHGAP24Q8N264 748 aa2.45□□□□□ -2.02
MCF2-204ENST00000414978 LINC00469Q8N7U9 141 aa2.45□□□□□ -2.02
MCF2-204ENST00000414978 BOLLQ8N9W6 283 aaKnown RBP2.45□□□□□ -2.02
MCF2-204ENST00000414978 OR4N2Q8NGD1 307 aa2.45□□□□□ -2.02
MCF2-204ENST00000414978 ELP5Q8TE02 316 aa2.45□□□□□ -2.02
MCF2-204ENST00000414978 FBXL8Q96CD0 374 aa2.45□□□□□ -2.02
MCF2-204ENST00000414978 C5orf30Q96GV9 206 aa2.45□□□□□ -2.02
MCF2-204ENST00000414978 PRICKLE1Q96MT3 831 aaPredicted RBP2.45□□□□□ -2.02
MCF2-204ENST00000414978 LRFN5Q96NI6 719 aa2.45□□□□□ -2.02
MCF2-204ENST00000414978 WWC2-AS2Q96NR7 200 aa2.45□□□□□ -2.02
MCF2-204ENST00000414978 GAL3ST4Q96RP7 486 aa2.45□□□□□ -2.02
MCF2-204ENST00000414978 HAUS8Q9BT25 410 aa2.45□□□□□ -2.02
MCF2-204ENST00000414978 KCNK15Q9H427 330 aa2.45□□□□□ -2.02
MCF2-204ENST00000414978 TOR3AQ9H497 397 aa2.45□□□□□ -2.02
MCF2-204ENST00000414978 BICC1Q9H694 974 aaKnown RBP2.45□□□□□ -2.02
MCF2-204ENST00000414978 RPF1Q9H9Y2 349 aaKnown RBP2.45□□□□□ -2.02
MCF2-204ENST00000414978 CALHM2Q9HA72 323 aa2.45□□□□□ -2.02
MCF2-204ENST00000414978 TUFT1Q9NNX1 390 aa2.45□□□□□ -2.02
MCF2-204ENST00000414978 EQTNQ9NQ60 294 aa2.45□□□□□ -2.02
MCF2-204ENST00000414978 PIH1D3Q9NQM4 214 aaKnown RBP2.45□□□□□ -2.02
MCF2-204ENST00000414978 COPS7AQ9UBW8 275 aa2.45□□□□□ -2.02
MCF2-204ENST00000414978 DDX25Q9UHL0 483 aaKnown RBP2.45□□□□□ -2.02
MCF2-204ENST00000414978 DDX52Q9Y2R4 599 aaKnown RBP eCLIP2.45□□□□□ -2.02
MCF2-204ENST00000414978 NAALAD2Q9Y3Q0 740 aa2.45□□□□□ -2.02
MCF2-204ENST00000414978 SEC23IPQ9Y6Y8 1000 aaKnown RBP2.45□□□□□ -2.02
MCF2-204ENST00000414978 TMEM178BH3BS89 294 aa2.45□□□□□ -2.02
MCF2-204ENST00000414978 ADAM12O43184 909 aa2.45□□□□□ -2.02
MCF2-204ENST00000414978 OR10H2O60403 315 aa2.45□□□□□ -2.02
MCF2-204ENST00000414978 ZNF217O75362 1048 aa2.45□□□□□ -2.02
MCF2-204ENST00000414978 MED24O75448 989 aa2.45□□□□□ -2.02
MCF2-204ENST00000414978 GH1P01241 217 aa2.45□□□□□ -2.02
MCF2-204ENST00000414978 GH2P01242 217 aa2.45□□□□□ -2.02
MCF2-204ENST00000414978 IGHEP01854 428 aa2.45□□□□□ -2.02
MCF2-204ENST00000414978 CHRM5P08912 532 aaPredicted RBP2.45□□□□□ -2.02
MCF2-204ENST00000414978 LINC00271P0C7V0 271 aa2.45□□□□□ -2.02
MCF2-204ENST00000414978 EPB41P11171 864 aaKnown RBP2.45□□□□□ -2.02
MCF2-204ENST00000414978 BMP5P22003 454 aa2.45□□□□□ -2.02
MCF2-204ENST00000414978 RYKP34925 604 aa2.45□□□□□ -2.02
MCF2-204ENST00000414978 SOAT1P35610 550 aa2.45□□□□□ -2.02
MCF2-204ENST00000414978 FRKP42685 505 aaPredicted RBP2.45□□□□□ -2.02
MCF2-204ENST00000414978 NR2C2P49116 596 aa2.45□□□□□ -2.02
MCF2-204ENST00000414978 ZNF415Q09FC8 603 aa2.45□□□□□ -2.02
MCF2-204ENST00000414978 CTU2Q2VPK5 515 aaKnown RBP2.45□□□□□ -2.02
MCF2-204ENST00000414978 CERKLQ49MI3 558 aaPredicted RBP2.45□□□□□ -2.02
MCF2-204ENST00000414978 CMPK2Q5EBM0 449 aa2.45□□□□□ -2.02
MCF2-204ENST00000414978 PLA2G4FQ68DD2 849 aa2.45□□□□□ -2.02
MCF2-204ENST00000414978 AAGABQ6PD74 315 aa2.45□□□□□ -2.02
MCF2-204ENST00000414978 VSTM1Q6UX27 236 aa2.45□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms