RNA–Protein interactions for RNA: ENST00000413987.1

SNHG3-201, Transcript of small nucleolar RNA host gene 3, humanhuman

TSL 1 (best)

Gene SNHG3, Length 2,201 nt, Biotype retained intron, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG3-201ENST00000413987 HIDE1A8MVS5 230 aa9.09□□□□□ -0.95
SNHG3-201ENST00000413987 KCNN4O15554 427 aa9.09□□□□□ -0.95
SNHG3-201ENST00000413987 LILRA1O75019 489 aa9.09□□□□□ -0.95
SNHG3-201ENST00000413987 RECQL5O94762 991 aaPredicted RBP9.09□□□□□ -0.95
SNHG3-201ENST00000413987 MFN2O95140 757 aa9.09□□□□□ -0.95
SNHG3-201ENST00000413987 SPDEFO95238 335 aa9.09□□□□□ -0.95
SNHG3-201ENST00000413987 ADH1BP00325 375 aa9.09□□□□□ -0.95
SNHG3-201ENST00000413987 ALDOAP04075 364 aaKnown RBP9.09□□□□□ -0.95
SNHG3-201ENST00000413987 CSF2P04141 144 aa9.09□□□□□ -0.95
SNHG3-201ENST00000413987 ATF6P18850 670 aa9.09□□□□□ -0.95
SNHG3-201ENST00000413987 CORO1AP31146 461 aaKnown RBP9.09□□□□□ -0.95
SNHG3-201ENST00000413987 CTNNB1P35222 781 aa9.09□□□□□ -0.95
SNHG3-201ENST00000413987 ETV5P41161 510 aa9.09□□□□□ -0.95
SNHG3-201ENST00000413987 GLUD2P49448 558 aa9.09□□□□□ -0.95
SNHG3-201ENST00000413987 KIAA1024LP59773 190 aa9.09□□□□□ -0.95
SNHG3-201ENST00000413987 CTBSQ01459 385 aa9.09□□□□□ -0.95
SNHG3-201ENST00000413987 NFATC3Q12968 1075 aa9.09□□□□□ -0.95
SNHG3-201ENST00000413987 BNIP3Q12983 259 aa9.09□□□□□ -0.95
SNHG3-201ENST00000413987 CSTF3Q12996 717 aaKnown RBP9.09□□□□□ -0.95
SNHG3-201ENST00000413987 RAB39AQ14964 217 aa9.09□□□□□ -0.95
SNHG3-201ENST00000413987 LEXMQ3ZCV2 418 aa9.09□□□□□ -0.95
SNHG3-201ENST00000413987 FGD3Q5JSP0 725 aa9.09□□□□□ -0.95
SNHG3-201ENST00000413987 STEAP4Q687X5 459 aa9.09□□□□□ -0.95
SNHG3-201ENST00000413987 SEL1L3Q68CR1 1132 aa9.09□□□□□ -0.95
SNHG3-201ENST00000413987 CYP4V2Q6ZWL3 525 aaPredicted RBP9.09□□□□□ -0.95
SNHG3-201ENST00000413987 FAM131BQ86XD5 332 aa9.09□□□□□ -0.95
SNHG3-201ENST00000413987 DCP1BQ8IZD4 617 aaKnown RBP9.09□□□□□ -0.95
SNHG3-201ENST00000413987 SLC15A4Q8N697 577 aa9.09□□□□□ -0.95
SNHG3-201ENST00000413987 NT5C3BQ969T7 300 aa9.09□□□□□ -0.95
SNHG3-201ENST00000413987 ACDQ96AP0 544 aa9.09□□□□□ -0.95
SNHG3-201ENST00000413987 ZNF347Q96SE7 839 aa9.09□□□□□ -0.95
SNHG3-201ENST00000413987 FUZQ9BT04 418 aa9.09□□□□□ -0.95
SNHG3-201ENST00000413987 RAB33BQ9H082 229 aa9.09□□□□□ -0.95
SNHG3-201ENST00000413987 SEMA6AQ9H2E6 1030 aa9.09□□□□□ -0.95
SNHG3-201ENST00000413987 NMUR1Q9HB89 426 aa9.09□□□□□ -0.95
SNHG3-201ENST00000413987 IL21RQ9HBE5 538 aa9.09□□□□□ -0.95
SNHG3-201ENST00000413987 SACM1LQ9NTJ5 587 aa9.09□□□□□ -0.95
SNHG3-201ENST00000413987 DAPK2Q9UIK4 370 aa9.09□□□□□ -0.95
SNHG3-201ENST00000413987 RAP2CQ9Y3L5 183 aa9.09□□□□□ -0.95
SNHG3-201ENST00000413987 MYO16Q9Y6X6 1858 aa9.09□□□□□ -0.95
SNHG3-201ENST00000413987 TCRBV3S1A0A5B6 114 aa9.09□□□□□ -0.95
SNHG3-201ENST00000413987 LINC01553A4QN01 128 aa9.09□□□□□ -0.95
SNHG3-201ENST00000413987 TRIM13O60858 407 aa9.09□□□□□ -0.95
SNHG3-201ENST00000413987 CLPXO76031 633 aa9.09□□□□□ -0.95
SNHG3-201ENST00000413987 TRUB2O95900 331 aaKnown RBP9.09□□□□□ -0.95
SNHG3-201ENST00000413987 TOP3BO95985 862 aaKnown RBP9.09□□□□□ -0.95
SNHG3-201ENST00000413987 TGM2P21980 687 aa9.09□□□□□ -0.95
SNHG3-201ENST00000413987 GABRB3P28472 473 aa9.09□□□□□ -0.95
SNHG3-201ENST00000413987 TYK2P29597 1187 aa9.09□□□□□ -0.95
SNHG3-201ENST00000413987 SDC4P31431 198 aa9.09□□□□□ -0.95
SNHG3-201ENST00000413987 NIPAL4Q0D2K0 466 aa9.09□□□□□ -0.95
SNHG3-201ENST00000413987 ELAVL2Q12926 359 aaKnown RBP9.09□□□□□ -0.95
SNHG3-201ENST00000413987 TRAF2Q12933 501 aa9.09□□□□□ -0.95
SNHG3-201ENST00000413987 GPR17Q13304 367 aa9.09□□□□□ -0.95
SNHG3-201ENST00000413987 PMS2P3Q13401 168 aa9.09□□□□□ -0.95
SNHG3-201ENST00000413987 TSTA3Q13630 321 aaPredicted RBP9.09□□□□□ -0.95
SNHG3-201ENST00000413987 CA9Q16790 459 aa9.09□□□□□ -0.95
SNHG3-201ENST00000413987 LSM12Q3MHD2 195 aaKnown RBP9.09□□□□□ -0.95
SNHG3-201ENST00000413987 ZNF852Q6ZMS4 543 aa9.09□□□□□ -0.95
SNHG3-201ENST00000413987 LINC00299Q6ZSB3 139 aa9.09□□□□□ -0.95
SNHG3-201ENST00000413987 HTR3DQ70Z44 454 aa9.09□□□□□ -0.95
SNHG3-201ENST00000413987 SLC26A9Q7LBE3 791 aa9.09□□□□□ -0.95
SNHG3-201ENST00000413987 ZC3HAV1Q7Z2W4 902 aaKnown RBP9.09□□□□□ -0.95
SNHG3-201ENST00000413987 CCDC185Q8N715 623 aa9.09□□□□□ -0.95
SNHG3-201ENST00000413987 NETO2Q8NC67 525 aa9.09□□□□□ -0.95
SNHG3-201ENST00000413987 SETD9Q8NE22 299 aa9.09□□□□□ -0.95
SNHG3-201ENST00000413987 RCC1LQ96I51 464 aaKnown RBP9.09□□□□□ -0.95
SNHG3-201ENST00000413987 OR52B2Q96RD2 323 aa9.09□□□□□ -0.95
SNHG3-201ENST00000413987 SLC29A1Q99808 456 aa9.09□□□□□ -0.95
SNHG3-201ENST00000413987 NKX2-4Q9H2Z4 354 aa9.09□□□□□ -0.95
SNHG3-201ENST00000413987 ZNF385DQ9H6B1 395 aa9.09□□□□□ -0.95
SNHG3-201ENST00000413987 POLR1BQ9H9Y6 1135 aa9.09□□□□□ -0.95
SNHG3-201ENST00000413987 ZBTB26Q9HCK0 441 aa9.09□□□□□ -0.95
SNHG3-201ENST00000413987 TREM1Q9NP99 234 aa9.09□□□□□ -0.95
SNHG3-201ENST00000413987 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP9.09□□□□□ -0.95
SNHG3-201ENST00000413987 C20orf96Q9NUD7 363 aaPredicted RBP9.09□□□□□ -0.95
SNHG3-201ENST00000413987 ASNSD1Q9NWL6 643 aa9.09□□□□□ -0.95
SNHG3-201ENST00000413987 FAM120CQ9NX05 1096 aaKnown RBP9.09□□□□□ -0.95
SNHG3-201ENST00000413987 DUS2Q9NX74 493 aaKnown RBP9.09□□□□□ -0.95
SNHG3-201ENST00000413987 ADA2Q9NZK5 511 aa9.09□□□□□ -0.95
SNHG3-201ENST00000413987 TMEM216Q9P0N5 145 aa9.09□□□□□ -0.95
SNHG3-201ENST00000413987 TXNDC16Q9P2K2 825 aa9.09□□□□□ -0.95
SNHG3-201ENST00000413987 ZNF451Q9Y4E5 1061 aa9.09□□□□□ -0.95
SNHG3-201ENST00000413987 CPQQ9Y646 472 aa9.09□□□□□ -0.95
SNHG3-201ENST00000413987 MYO9BQ13459 2157 aa9.09□□□□□ -0.95
SNHG3-201ENST00000413987 OR6C75A6NL08 312 aa9.08□□□□□ -0.96
SNHG3-201ENST00000413987 ZNF716A6NP11 495 aa9.08□□□□□ -0.96
SNHG3-201ENST00000413987 I6L893 689 aaPredicted RBP9.08□□□□□ -0.96
SNHG3-201ENST00000413987 MDM4O15151 490 aa9.08□□□□□ -0.96
SNHG3-201ENST00000413987 MSI1O43347 362 aaKnown RBP9.08□□□□□ -0.96
SNHG3-201ENST00000413987 CLEC2LP0C7M8 214 aa9.08□□□□□ -0.96
SNHG3-201ENST00000413987 ZNF735P0CB33 412 aa9.08□□□□□ -0.96
SNHG3-201ENST00000413987 MLNP12872 115 aa9.08□□□□□ -0.96
SNHG3-201ENST00000413987 NELFEP18615 380 aaKnown RBP9.08□□□□□ -0.96
SNHG3-201ENST00000413987 ARNTP27540 789 aa9.08□□□□□ -0.96
SNHG3-201ENST00000413987 ARRB2P32121 409 aa9.08□□□□□ -0.96
SNHG3-201ENST00000413987 MSX2P35548 267 aaPredicted RBP9.08□□□□□ -0.96
SNHG3-201ENST00000413987 ACADSBP45954 432 aa9.08□□□□□ -0.96
SNHG3-201ENST00000413987 RPL14P50914 215 aaKnown RBP9.08□□□□□ -0.96
SNHG3-201ENST00000413987 STX1BP61266 288 aa9.08□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms