RNA–Protein interactions for RNA: ENST00000400911.7

VAMP1-203, Transcript of vesicle associated membrane protein 1, humanhuman

TSL 1 (best) BASIC

Gene VAMP1, Length 1,068 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP1-203ENST00000400911 ACBD4Q8NC06 268 aa13.73□□□□□ -0.21
VAMP1-203ENST00000400911 M1APQ8TC57 530 aa13.73□□□□□ -0.21
VAMP1-203ENST00000400911 CA5BP1Q8WTZ4 195 aa13.73□□□□□ -0.21
VAMP1-203ENST00000400911 C1orf54Q8WWF1 131 aa13.73□□□□□ -0.21
VAMP1-203ENST00000400911 LPGAT1Q92604 370 aa13.73□□□□□ -0.21
VAMP1-203ENST00000400911 PRAP1Q96NZ9 151 aa13.73□□□□□ -0.21
VAMP1-203ENST00000400911 TRIM51Q9BSJ1 452 aa13.73□□□□□ -0.21
VAMP1-203ENST00000400911 FAM114A2Q9NRY5 505 aa13.73□□□□□ -0.21
VAMP1-203ENST00000400911 ZNF148Q9UQR1 794 aa13.73□□□□□ -0.21
VAMP1-203ENST00000400911 CRYL1Q9Y2S2 319 aa13.73□□□□□ -0.21
VAMP1-203ENST00000400911 SNRNP200O75643 2136 aaKnown RBP13.73□□□□□ -0.21
VAMP1-203ENST00000400911 ZNF839A8K0R7 811 aa13.72□□□□□ -0.21
VAMP1-203ENST00000400911 GABRR3A8MPY1 467 aa13.72□□□□□ -0.21
VAMP1-203ENST00000400911 MIF4GDA9UHW6 222 aaKnown RBP13.72□□□□□ -0.21
VAMP1-203ENST00000400911 E7ENX8 843 aa13.72□□□□□ -0.21
VAMP1-203ENST00000400911 SGK494L7N484 410 aa13.72□□□□□ -0.21
VAMP1-203ENST00000400911 SMAPO00193 183 aa13.72□□□□□ -0.21
VAMP1-203ENST00000400911 ADAM10O14672 748 aa13.72□□□□□ -0.21
VAMP1-203ENST00000400911 DIAPH2O60879 1101 aa13.72□□□□□ -0.21
VAMP1-203ENST00000400911 NEURL1O76050 574 aa13.72□□□□□ -0.21
VAMP1-203ENST00000400911 VAPBO95292 243 aa13.72□□□□□ -0.21
VAMP1-203ENST00000400911 IPO7O95373 1038 aaKnown RBP13.72□□□□□ -0.21
VAMP1-203ENST00000400911 NSA2O95478 260 aaKnown RBP13.72□□□□□ -0.21
VAMP1-203ENST00000400911 SP1P08047 785 aa13.72□□□□□ -0.21
VAMP1-203ENST00000400911 CYC1P08574 325 aa13.72□□□□□ -0.21
VAMP1-203ENST00000400911 ZSCAN5DPP0CG00 497 aa13.72□□□□□ -0.21
VAMP1-203ENST00000400911 ARNTP27540 789 aa13.72□□□□□ -0.21
VAMP1-203ENST00000400911 HSD17B2P37059 387 aa13.72□□□□□ -0.21
VAMP1-203ENST00000400911 ABATP80404 500 aa13.72□□□□□ -0.21
VAMP1-203ENST00000400911 TAP2Q03519 686 aa13.72□□□□□ -0.21
VAMP1-203ENST00000400911 ACTN3Q08043 901 aaPredicted RBP13.72□□□□□ -0.21
VAMP1-203ENST00000400911 SNX1Q13596 522 aa13.72□□□□□ -0.21
VAMP1-203ENST00000400911 PTK6Q13882 451 aa13.72□□□□□ -0.21
VAMP1-203ENST00000400911 KCNJ11Q14654 390 aa13.72□□□□□ -0.21
VAMP1-203ENST00000400911 EXT1Q16394 746 aa13.72□□□□□ -0.21
VAMP1-203ENST00000400911 SLC25A25Q6KCM7 469 aa13.72□□□□□ -0.21
VAMP1-203ENST00000400911 CES3Q6UWW8 571 aa13.72□□□□□ -0.21
VAMP1-203ENST00000400911 CHERPQ8IWX8 916 aaKnown RBP13.72□□□□□ -0.21
VAMP1-203ENST00000400911 GHDCQ8N2G8 530 aa13.72□□□□□ -0.21
VAMP1-203ENST00000400911 TMEM178AQ8NBL3 297 aa13.72□□□□□ -0.21
VAMP1-203ENST00000400911 ACRBPQ8NEB7 543 aa13.72□□□□□ -0.21
VAMP1-203ENST00000400911 ZNF480Q8WV37 535 aa13.72□□□□□ -0.21
VAMP1-203ENST00000400911 SDCCAG3Q96C92 435 aa13.72□□□□□ -0.21
VAMP1-203ENST00000400911 EBNA1BP2Q99848 306 aaKnown RBP13.72□□□□□ -0.21
VAMP1-203ENST00000400911 TSPY26PQ9H489 355 aa13.72□□□□□ -0.21
VAMP1-203ENST00000400911 MMP25Q9NPA2 562 aa13.72□□□□□ -0.21
VAMP1-203ENST00000400911 PKDREJQ9NTG1 2253 aa13.72□□□□□ -0.21
VAMP1-203ENST00000400911 E9PLN8 166 aa13.71□□□□□ -0.21
VAMP1-203ENST00000400911 H3BMM5 538 aa13.71□□□□□ -0.21
VAMP1-203ENST00000400911 TSPAN12O95859 305 aa13.71□□□□□ -0.21
VAMP1-203ENST00000400911 SYF2O95926 243 aaKnown RBP13.71□□□□□ -0.21
VAMP1-203ENST00000400911 ESR1P03372 595 aa13.71□□□□□ -0.21
VAMP1-203ENST00000400911 CATP04040 527 aaKnown RBP13.71□□□□□ -0.21
VAMP1-203ENST00000400911 IL1RNP18510 177 aa13.71□□□□□ -0.21
VAMP1-203ENST00000400911 BCL6P41182 706 aa13.71□□□□□ -0.21
VAMP1-203ENST00000400911 AGTR2P50052 363 aa13.71□□□□□ -0.21
VAMP1-203ENST00000400911 MAPKAPK3Q16644 382 aa13.71□□□□□ -0.21
VAMP1-203ENST00000400911 SFT2D3Q587I9 215 aa13.71□□□□□ -0.21
VAMP1-203ENST00000400911 RNFT1Q5M7Z0 435 aa13.71□□□□□ -0.21
VAMP1-203ENST00000400911 THEMIS2Q5TEJ8 643 aa13.71□□□□□ -0.21
VAMP1-203ENST00000400911 ZNF468Q5VIY5 522 aaPredicted RBP13.71□□□□□ -0.21
VAMP1-203ENST00000400911 MRNIPQ6NTE8 343 aa13.71□□□□□ -0.21
VAMP1-203ENST00000400911 RAD9BQ6WBX8 426 aa13.71□□□□□ -0.21
VAMP1-203ENST00000400911 VN1R4Q7Z5H5 301 aa13.71□□□□□ -0.21
VAMP1-203ENST00000400911 FGD2Q7Z6J4 655 aa13.71□□□□□ -0.21
VAMP1-203ENST00000400911 SPNS2Q8IVW8 549 aa13.71□□□□□ -0.21
VAMP1-203ENST00000400911 REXO1L1PQ8IX06 675 aa13.71□□□□□ -0.21
VAMP1-203ENST00000400911 SYCE1Q8N0S2 351 aa13.71□□□□□ -0.21
VAMP1-203ENST00000400911 SLC5A8Q8N695 610 aa13.71□□□□□ -0.21
VAMP1-203ENST00000400911 HORMAD2Q8N7B1 307 aa13.71□□□□□ -0.21
VAMP1-203ENST00000400911 CCDC89Q8N998 374 aa13.71□□□□□ -0.21
VAMP1-203ENST00000400911 MCOLN3Q8TDD5 553 aa13.71□□□□□ -0.21
VAMP1-203ENST00000400911 PHF10Q8WUB8 498 aaKnown RBP13.71□□□□□ -0.21
VAMP1-203ENST00000400911 MFSD3Q96ES6 412 aa13.71□□□□□ -0.21
VAMP1-203ENST00000400911 DMRTA2Q96SC8 542 aa13.71□□□□□ -0.21
VAMP1-203ENST00000400911 VKORC1Q9BQB6 163 aa13.71□□□□□ -0.21
VAMP1-203ENST00000400911 TRIM5Q9C035 493 aa13.71□□□□□ -0.21
VAMP1-203ENST00000400911 IL22Q9GZX6 179 aa13.71□□□□□ -0.21
VAMP1-203ENST00000400911 CDCP1Q9H5V8 836 aa13.71□□□□□ -0.21
VAMP1-203ENST00000400911 LRFN1Q9P244 771 aa13.71□□□□□ -0.21
VAMP1-203ENST00000400911 PPT2Q9UMR5 302 aa13.71□□□□□ -0.21
VAMP1-203ENST00000400911 ASB1Q9Y576 335 aa13.71□□□□□ -0.21
VAMP1-203ENST00000400911 E5RI56 91 aa13.7□□□□□ -0.22
VAMP1-203ENST00000400911 PRRG2O14669 202 aa13.7□□□□□ -0.22
VAMP1-203ENST00000400911 CDC123O75794 336 aaPredicted RBP13.7□□□□□ -0.22
VAMP1-203ENST00000400911 RPL22P35268 128 aaKnown RBP13.7□□□□□ -0.22
VAMP1-203ENST00000400911 NPY2RP49146 381 aa13.7□□□□□ -0.22
VAMP1-203ENST00000400911 ADARP55265 1226 aaKnown RBP13.7□□□□□ -0.22
VAMP1-203ENST00000400911 ABRAXAS2Q15018 415 aa13.7□□□□□ -0.22
VAMP1-203ENST00000400911 NSDHLQ15738 373 aa13.7□□□□□ -0.22
VAMP1-203ENST00000400911 TYSND1Q2T9J0 566 aa13.7□□□□□ -0.22
VAMP1-203ENST00000400911 RNF187Q5TA31 235 aaPredicted RBP13.7□□□□□ -0.22
VAMP1-203ENST00000400911 TMEM214Q6NUQ4 689 aaKnown RBP13.7□□□□□ -0.22
VAMP1-203ENST00000400911 PAPD4Q6PIY7 484 aaKnown RBP13.7□□□□□ -0.22
VAMP1-203ENST00000400911 LRRC56Q8IYG6 542 aaPredicted RBP13.7□□□□□ -0.22
VAMP1-203ENST00000400911 FAM98AQ8NCA5 519 aaKnown RBP13.7□□□□□ -0.22
VAMP1-203ENST00000400911 HES6Q96HZ4 224 aa13.7□□□□□ -0.22
VAMP1-203ENST00000400911 CCDC138Q96M89 665 aa13.7□□□□□ -0.22
VAMP1-203ENST00000400911 PANX2Q96RD6 677 aa13.7□□□□□ -0.22
VAMP1-203ENST00000400911 SLC30A3Q99726 388 aa13.7□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 67 ms