RNA–Protein interactions for RNA: ENST00000399804.5

SCAF4-202, Transcript of SR-related CTD associated factor 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCAF4, Length 4,127 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF4-202ENST00000399804 ADGRD2Q7Z7M1 963 aa13.55□□□□□ -0.24
SCAF4-202ENST00000399804 TMBIM1Q969X1 311 aa13.55□□□□□ -0.24
SCAF4-202ENST00000399804 NACC2Q96BF6 587 aa13.55□□□□□ -0.24
SCAF4-202ENST00000399804 NECTIN4Q96NY8 510 aa13.55□□□□□ -0.24
SCAF4-202ENST00000399804 C17orf62Q9BQA9 187 aa13.55□□□□□ -0.24
SCAF4-202ENST00000399804 FNDC11Q9BVV2 318 aa13.55□□□□□ -0.24
SCAF4-202ENST00000399804 CMTM6Q9NX76 183 aa13.55□□□□□ -0.24
SCAF4-202ENST00000399804 STOML2Q9UJZ1 356 aa13.55□□□□□ -0.24
SCAF4-202ENST00000399804 TCRBV21S2A2A0A5A6 115 aa13.55□□□□□ -0.24
SCAF4-202ENST00000399804 PBX2P40425 430 aa13.55□□□□□ -0.24
SCAF4-202ENST00000399804 MERTKQ12866 999 aa13.55□□□□□ -0.24
SCAF4-202ENST00000399804 TRAF3Q13114 568 aa13.55□□□□□ -0.24
SCAF4-202ENST00000399804 COL9A2Q14055 689 aaPredicted RBP13.55□□□□□ -0.24
SCAF4-202ENST00000399804 LRP8Q14114 963 aa13.55□□□□□ -0.24
SCAF4-202ENST00000399804 ASTLQ6HA08 431 aaPredicted RBP13.55□□□□□ -0.24
SCAF4-202ENST00000399804 ADGRG6Q86SQ4 1221 aa13.55□□□□□ -0.24
SCAF4-202ENST00000399804 VRK3Q8IV63 474 aa13.55□□□□□ -0.24
SCAF4-202ENST00000399804 DEFB119Q8N690 84 aa13.55□□□□□ -0.24
SCAF4-202ENST00000399804 ZNF540Q8NDQ6 660 aa13.55□□□□□ -0.24
SCAF4-202ENST00000399804 IFT80Q9P2H3 777 aaPredicted RBP13.55□□□□□ -0.24
SCAF4-202ENST00000399804 RPS6KB2Q9UBS0 482 aa13.55□□□□□ -0.24
SCAF4-202ENST00000399804 ATP6V1HQ9UI12 483 aa13.55□□□□□ -0.24
SCAF4-202ENST00000399804 BRCA1P38398 1863 aaKnown RBP13.55□□□□□ -0.24
SCAF4-202ENST00000399804 SOBPA7XYQ1 873 aa13.55□□□□□ -0.24
SCAF4-202ENST00000399804 TARM1B6A8C7 271 aa13.55□□□□□ -0.24
SCAF4-202ENST00000399804 M0QX08 132 aa13.55□□□□□ -0.24
SCAF4-202ENST00000399804 OLFM2O95897 454 aa13.55□□□□□ -0.24
SCAF4-202ENST00000399804 IFNW1P05000 195 aa13.55□□□□□ -0.24
SCAF4-202ENST00000399804 TIA1P31483 386 aaKnown RBP eCLIP13.55□□□□□ -0.241e-6■■■□□ 18.1
SCAF4-202ENST00000399804 MMP12P39900 470 aa13.55□□□□□ -0.24
SCAF4-202ENST00000399804 CDH12P55289 794 aa13.55□□□□□ -0.24
SCAF4-202ENST00000399804 FBXW4P57775 412 aa13.55□□□□□ -0.24
SCAF4-202ENST00000399804 HTRA4P83105 476 aaPredicted RBP13.55□□□□□ -0.24
SCAF4-202ENST00000399804 AAK1Q2M2I8 961 aa13.55□□□□□ -0.24
SCAF4-202ENST00000399804 GTDC1Q4AE62 458 aa13.55□□□□□ -0.24
SCAF4-202ENST00000399804 LIN52Q52LA3 116 aa13.55□□□□□ -0.24
SCAF4-202ENST00000399804 NEK5Q6P3R8 708 aa13.55□□□□□ -0.24
SCAF4-202ENST00000399804 NXPE4Q6UWF7 544 aa13.55□□□□□ -0.24
SCAF4-202ENST00000399804 THAP5Q7Z6K1 395 aa13.55□□□□□ -0.24
SCAF4-202ENST00000399804 SLC22A15Q8IZD6 547 aa13.55□□□□□ -0.24
SCAF4-202ENST00000399804 CDK20Q8IZL9 346 aa13.55□□□□□ -0.24
SCAF4-202ENST00000399804 LILRA3Q8N6C8 439 aaPredicted RBP13.55□□□□□ -0.24
SCAF4-202ENST00000399804 CHFRQ96EP1 664 aa13.55□□□□□ -0.24
SCAF4-202ENST00000399804 SNTNA6NMZ2 147 aa13.54□□□□□ -0.24
SCAF4-202ENST00000399804 FESP07332 822 aa13.54□□□□□ -0.24
SCAF4-202ENST00000399804 CPN2P22792 545 aa13.54□□□□□ -0.24
SCAF4-202ENST00000399804 RPS7P62081 194 aaKnown RBP13.54□□□□□ -0.24
SCAF4-202ENST00000399804 TUBB3Q13509 450 aa13.54□□□□□ -0.24
SCAF4-202ENST00000399804 RCAN2Q14206 197 aa13.54□□□□□ -0.24
SCAF4-202ENST00000399804 COQ5Q5HYK3 327 aa13.54□□□□□ -0.24
SCAF4-202ENST00000399804 CWF19L1Q69YN2 538 aaKnown RBP13.54□□□□□ -0.24
SCAF4-202ENST00000399804 PRR23CQ6ZRP0 262 aa13.54□□□□□ -0.24
SCAF4-202ENST00000399804 OR8J3Q8NGG0 315 aa13.54□□□□□ -0.24
SCAF4-202ENST00000399804 NRG4Q8WWG1 115 aa13.54□□□□□ -0.24
SCAF4-202ENST00000399804 F2RL3Q96RI0 385 aa13.54□□□□□ -0.24
SCAF4-202ENST00000399804 YIPF4Q9BSR8 244 aa13.54□□□□□ -0.24
SCAF4-202ENST00000399804 PBX4Q9BYU1 374 aa13.54□□□□□ -0.24
SCAF4-202ENST00000399804 REEP4Q9H6H4 257 aa13.54□□□□□ -0.24
SCAF4-202ENST00000399804 EXD2Q9NVH0 621 aa13.54□□□□□ -0.24
SCAF4-202ENST00000399804 SNX7Q9UNH6 387 aa13.54□□□□□ -0.24
SCAF4-202ENST00000399804 OR51B4Q9Y5P0 310 aa13.54□□□□□ -0.24
SCAF4-202ENST00000399804 GLOD5A6NK44 160 aa13.54□□□□□ -0.24
SCAF4-202ENST00000399804 HSD3B1P14060 373 aa13.54□□□□□ -0.24
SCAF4-202ENST00000399804 NT5EP21589 574 aa13.54□□□□□ -0.24
SCAF4-202ENST00000399804 HSD3B2P26439 372 aa13.54□□□□□ -0.24
SCAF4-202ENST00000399804 KRT20P35900 424 aa13.54□□□□□ -0.24
SCAF4-202ENST00000399804 NCBP2P52298 156 aaKnown RBP eCLIP13.54□□□□□ -0.242e-7■■■□□ 16.2
SCAF4-202ENST00000399804 C21orf59P57076 290 aa13.54□□□□□ -0.24
SCAF4-202ENST00000399804 RNF175Q8N4F7 328 aa13.54□□□□□ -0.24
SCAF4-202ENST00000399804 NEIL2Q969S2 332 aa13.54□□□□□ -0.24
SCAF4-202ENST00000399804 SLC38A3Q99624 504 aa13.54□□□□□ -0.24
SCAF4-202ENST00000399804 ACPTQ9BZG2 426 aa13.54□□□□□ -0.24
SCAF4-202ENST00000399804 PRSS16Q9NQE7 514 aa13.54□□□□□ -0.24
SCAF4-202ENST00000399804 CCM2LQ9NUG4 571 aaPredicted RBP13.54□□□□□ -0.24
SCAF4-202ENST00000399804 A0A1B0GVG6 124 aa13.54□□□□□ -0.24
SCAF4-202ENST00000399804 B4DGG1 531 aa13.54□□□□□ -0.24
SCAF4-202ENST00000399804 ZNF195O14628 629 aa13.54□□□□□ -0.24
SCAF4-202ENST00000399804 PRMT3O60678 531 aa13.54□□□□□ -0.24
SCAF4-202ENST00000399804 CD72P21854 359 aa13.54□□□□□ -0.24
SCAF4-202ENST00000399804 CAPGP40121 348 aa13.54□□□□□ -0.24
SCAF4-202ENST00000399804 PRLHRP49683 370 aa13.54□□□□□ -0.24
SCAF4-202ENST00000399804 SMIM11AP58511 58 aa13.54□□□□□ -0.24
SCAF4-202ENST00000399804 CDC42P60953 191 aa13.54□□□□□ -0.24
SCAF4-202ENST00000399804 DAG1Q14118 895 aa13.54□□□□□ -0.24
SCAF4-202ENST00000399804 ZNHIT3Q15649 155 aaPredicted RBP13.54□□□□□ -0.24
SCAF4-202ENST00000399804 IFI44LQ53G44 452 aa13.54□□□□□ -0.24
SCAF4-202ENST00000399804 DUS1LQ6P1R4 473 aaKnown RBP13.54□□□□□ -0.24
SCAF4-202ENST00000399804 Q6ZSR9 355 aa13.54□□□□□ -0.24
SCAF4-202ENST00000399804 RETREG3Q86VR2 466 aa13.54□□□□□ -0.24
SCAF4-202ENST00000399804 SVOPQ8N4V2 548 aa13.54□□□□□ -0.24
SCAF4-202ENST00000399804 PROKR1Q8TCW9 393 aa13.54□□□□□ -0.24
SCAF4-202ENST00000399804 KRCC1Q9NPI7 259 aaPredicted RBP13.54□□□□□ -0.24
SCAF4-202ENST00000399804 CYP8B1Q9UNU6 501 aa13.54□□□□□ -0.24
SCAF4-202ENST00000399804 OR10H1Q9Y4A9 318 aa13.54□□□□□ -0.24
SCAF4-202ENST00000399804 TNFP01375 233 aa13.54□□□□□ -0.24
SCAF4-202ENST00000399804 HTR1EP28566 365 aa13.54□□□□□ -0.24
SCAF4-202ENST00000399804 IFNGR2P38484 337 aa13.54□□□□□ -0.24
SCAF4-202ENST00000399804 P2RY2P41231 377 aa13.54□□□□□ -0.24
SCAF4-202ENST00000399804 SCARB2Q14108 478 aa13.54□□□□□ -0.24
SCAF4-202ENST00000399804 ZNF542PQ5EBM4 170 aa13.54□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms