RNA–Protein interactions for RNA: ENST00000396828.8

NEDD8-202, Transcript of neural precursor cell expressed, developmentally down-regulated 8, humanhuman

TSL 2

Gene NEDD8, Length 626 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-202ENST00000396828 P4HTMQ9NXG6 502 aa9.9□□□□□ -0.82
NEDD8-202ENST00000396828 GRID1Q9ULK0 1009 aa9.9□□□□□ -0.82
NEDD8-202ENST00000396828 NUP210LQ5VU65 1888 aa9.89□□□□□ -0.83
NEDD8-202ENST00000396828 TMEM120BA0PK00 339 aa9.89□□□□□ -0.83
NEDD8-202ENST00000396828 WIPF3A6NGB9 483 aa9.89□□□□□ -0.83
NEDD8-202ENST00000396828 ISM1B1AKI9 464 aa9.89□□□□□ -0.83
NEDD8-202ENST00000396828 TM9SF1O15321 606 aa9.89□□□□□ -0.83
NEDD8-202ENST00000396828 MAP3K7O43318 606 aa9.89□□□□□ -0.83
NEDD8-202ENST00000396828 NRP2O60462 931 aa9.89□□□□□ -0.83
NEDD8-202ENST00000396828 NIPSNAP2O75323 286 aa9.89□□□□□ -0.83
NEDD8-202ENST00000396828 HBQ1P09105 142 aa9.89□□□□□ -0.83
NEDD8-202ENST00000396828 SLC35E2BP0CK96 405 aa9.89□□□□□ -0.83
NEDD8-202ENST00000396828 MAGP20916 626 aa9.89□□□□□ -0.83
NEDD8-202ENST00000396828 FOLR3P41439 243 aa9.89□□□□□ -0.83
NEDD8-202ENST00000396828 GRIA3P42263 894 aa9.89□□□□□ -0.83
NEDD8-202ENST00000396828 DCDP81605 110 aaKnown RBP9.89□□□□□ -0.83
NEDD8-202ENST00000396828 MYBPC3Q14896 1274 aa9.89□□□□□ -0.83
NEDD8-202ENST00000396828 FAM83EQ2M2I3 478 aa9.89□□□□□ -0.83
NEDD8-202ENST00000396828 TSNAXIP1Q2TAA8 658 aa9.89□□□□□ -0.83
NEDD8-202ENST00000396828 TTLL9Q3SXZ7 439 aa9.89□□□□□ -0.83
NEDD8-202ENST00000396828 NKAIN1Q4KMZ8 207 aa9.89□□□□□ -0.83
NEDD8-202ENST00000396828 VWA5B1Q5TIE3 1220 aa9.89□□□□□ -0.83
NEDD8-202ENST00000396828 FCRL6Q6DN72 434 aa9.89□□□□□ -0.83
NEDD8-202ENST00000396828 KLC3Q6P597 504 aa9.89□□□□□ -0.83
NEDD8-202ENST00000396828 SHISA6Q6ZSJ9 500 aa9.89□□□□□ -0.83
NEDD8-202ENST00000396828 SH2D5Q6ZV89 423 aa9.89□□□□□ -0.83
NEDD8-202ENST00000396828 OTOAQ7RTW8 1153 aa9.89□□□□□ -0.83
NEDD8-202ENST00000396828 CUZD1Q86UP6 607 aa9.89□□□□□ -0.83
NEDD8-202ENST00000396828 TAX1BP1Q86VP1 789 aa9.89□□□□□ -0.83
NEDD8-202ENST00000396828 RAB43Q86YS6 212 aa9.89□□□□□ -0.83
NEDD8-202ENST00000396828 NKAPQ8N5F7 415 aaKnown RBP9.89□□□□□ -0.83
NEDD8-202ENST00000396828 AMER2Q8N7J2 671 aa9.89□□□□□ -0.83
NEDD8-202ENST00000396828 OR2Y1Q8NGV0 311 aa9.89□□□□□ -0.83
NEDD8-202ENST00000396828 N4BP2L2Q92802 583 aaPredicted RBP9.89□□□□□ -0.83
NEDD8-202ENST00000396828 GPR21Q99679 349 aa9.89□□□□□ -0.83
NEDD8-202ENST00000396828 CHRNA10Q9GZZ6 450 aa9.89□□□□□ -0.83
NEDD8-202ENST00000396828 OR6C2Q9NZP2 312 aa9.89□□□□□ -0.83
NEDD8-202ENST00000396828 CAMSAP3Q9P1Y5 1249 aaPredicted RBP9.89□□□□□ -0.83
NEDD8-202ENST00000396828 IFT80Q9P2H3 777 aaPredicted RBP9.89□□□□□ -0.83
NEDD8-202ENST00000396828 B3GNT3Q9Y2A9 372 aa9.89□□□□□ -0.83
NEDD8-202ENST00000396828 PADI2Q9Y2J8 665 aa9.89□□□□□ -0.83
NEDD8-202ENST00000396828 AP1M2Q9Y6Q5 423 aa9.89□□□□□ -0.83
NEDD8-202ENST00000396828 PCM1Q15154 2024 aa9.89□□□□□ -0.83
NEDD8-202ENST00000396828 TACC2O95359 2948 aa9.88□□□□□ -0.83
NEDD8-202ENST00000396828 DCHS2Q6V1P9 2916 aa9.88□□□□□ -0.83
NEDD8-202ENST00000396828 POLR3GO15318 223 aaPredicted RBP9.88□□□□□ -0.83
NEDD8-202ENST00000396828 TYROBPO43914 113 aa9.88□□□□□ -0.83
NEDD8-202ENST00000396828 KLHL2O95198 593 aa9.88□□□□□ -0.83
NEDD8-202ENST00000396828 MED26O95402 600 aa9.88□□□□□ -0.83
NEDD8-202ENST00000396828 LDLRP01130 860 aa9.88□□□□□ -0.83
NEDD8-202ENST00000396828 GSTM1P09488 218 aa9.88□□□□□ -0.83
NEDD8-202ENST00000396828 LTA4HP09960 611 aaKnown RBP9.88□□□□□ -0.83
NEDD8-202ENST00000396828 CCDC166P0CW27 439 aa9.88□□□□□ -0.83
NEDD8-202ENST00000396828 CREB1P16220 341 aa9.88□□□□□ -0.83
NEDD8-202ENST00000396828 ALAS2P22557 587 aa9.88□□□□□ -0.83
NEDD8-202ENST00000396828 PKLRP30613 574 aa9.88□□□□□ -0.83
NEDD8-202ENST00000396828 RPA3P35244 121 aaPredicted RBP9.88□□□□□ -0.83
NEDD8-202ENST00000396828 RGS4P49798 205 aa9.88□□□□□ -0.83
NEDD8-202ENST00000396828 IL2P60568 153 aa9.88□□□□□ -0.83
NEDD8-202ENST00000396828 YBX1P67809 324 aaKnown RBP9.88□□□□□ -0.83
NEDD8-202ENST00000396828 GSTM4Q03013 218 aa9.88□□□□□ -0.83
NEDD8-202ENST00000396828 HSPA14Q0VDF9 509 aa9.88□□□□□ -0.83
NEDD8-202ENST00000396828 SLC5A12Q1EHB4 618 aa9.88□□□□□ -0.83
NEDD8-202ENST00000396828 CCDC153Q494R4 210 aa9.88□□□□□ -0.83
NEDD8-202ENST00000396828 CCSMST1Q4G0I0 132 aa9.88□□□□□ -0.83
NEDD8-202ENST00000396828 LRRC8EQ6NSJ5 796 aa9.88□□□□□ -0.83
NEDD8-202ENST00000396828 IGFL3Q6UXB1 125 aa9.88□□□□□ -0.83
NEDD8-202ENST00000396828 Q6ZS92 163 aa9.88□□□□□ -0.83
NEDD8-202ENST00000396828 TTLL10Q6ZVT0 673 aa9.88□□□□□ -0.83
NEDD8-202ENST00000396828 COX15Q7KZN9 410 aa9.88□□□□□ -0.83
NEDD8-202ENST00000396828 MCATQ8IVS2 390 aaKnown RBP9.88□□□□□ -0.83
NEDD8-202ENST00000396828 SPNS2Q8IVW8 549 aa9.88□□□□□ -0.83
NEDD8-202ENST00000396828 SLC22A15Q8IZD6 547 aa9.88□□□□□ -0.83
NEDD8-202ENST00000396828 METTL27Q8N6F8 245 aaPredicted RBP9.88□□□□□ -0.83
NEDD8-202ENST00000396828 ANKRD42Q8N9B4 389 aa9.88□□□□□ -0.83
NEDD8-202ENST00000396828 CFAP61Q8NHU2 1237 aa9.88□□□□□ -0.83
NEDD8-202ENST00000396828 PROKR1Q8TCW9 393 aa9.88□□□□□ -0.83
NEDD8-202ENST00000396828 TCP10LQ8TDR4 215 aa9.88□□□□□ -0.83
NEDD8-202ENST00000396828 PTERQ96BW5 349 aa9.88□□□□□ -0.83
NEDD8-202ENST00000396828 FAM136AQ96C01 138 aa9.88□□□□□ -0.83
NEDD8-202ENST00000396828 BARD1Q99728 777 aaKnown RBP9.88□□□□□ -0.83
NEDD8-202ENST00000396828 NMRAL1Q9HBL8 299 aa9.88□□□□□ -0.83
NEDD8-202ENST00000396828 CUEDC1Q9NWM3 386 aaPredicted RBP9.88□□□□□ -0.83
NEDD8-202ENST00000396828 IRAK4Q9NWZ3 460 aa9.88□□□□□ -0.83
NEDD8-202ENST00000396828 C5AR2Q9P296 337 aa9.88□□□□□ -0.83
NEDD8-202ENST00000396828 STOX2Q9P2F5 926 aaPredicted RBP9.88□□□□□ -0.83
NEDD8-202ENST00000396828 KLHL42Q9P2K6 505 aa9.88□□□□□ -0.83
NEDD8-202ENST00000396828 NDOR1Q9UHB4 597 aa9.88□□□□□ -0.83
NEDD8-202ENST00000396828 POLG2Q9UHN1 485 aa9.88□□□□□ -0.83
NEDD8-202ENST00000396828 GPN3Q9UHW5 284 aaPredicted RBP9.88□□□□□ -0.83
NEDD8-202ENST00000396828 PLCL2Q9UPR0 1127 aa9.88□□□□□ -0.83
NEDD8-202ENST00000396828 RUVBL2Q9Y230 463 aaKnown RBP9.88□□□□□ -0.83
NEDD8-202ENST00000396828 DHRS7Q9Y394 339 aa9.88□□□□□ -0.83
NEDD8-202ENST00000396828 APCP25054 2843 aa9.88□□□□□ -0.83
NEDD8-202ENST00000396828 FBN2P35556 2912 aa9.88□□□□□ -0.83
NEDD8-202ENST00000396828 CROCCQ5TZA2 2017 aa9.87□□□□□ -0.83
NEDD8-202ENST00000396828 SOCS6O14544 535 aa9.87□□□□□ -0.83
NEDD8-202ENST00000396828 GPC4O75487 556 aa9.87□□□□□ -0.83
NEDD8-202ENST00000396828 APOA4P06727 396 aa9.87□□□□□ -0.83
NEDD8-202ENST00000396828 CHN1P15882 459 aa9.87□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms