RNA–Protein interactions for RNA: ENST00000382099.2

VLDLR-202, Transcript of very low density lipoprotein receptor, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene VLDLR, Length 3,240 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VLDLR-202ENST00000382099 AP1S2P56377 157 aa14.56□□□□□ -0.08
VLDLR-202ENST00000382099 CAMK2GQ13555 558 aaPredicted RBP14.56□□□□□ -0.08
VLDLR-202ENST00000382099 RBBP7Q16576 425 aa14.56□□□□□ -0.08
VLDLR-202ENST00000382099 C21orf62-AS1Q17RA5 79 aa14.56□□□□□ -0.08
VLDLR-202ENST00000382099 OR2T5Q6IEZ7 315 aa14.56□□□□□ -0.08
VLDLR-202ENST00000382099 DLEU7Q6UYE1 221 aa14.56□□□□□ -0.08
VLDLR-202ENST00000382099 RRM2BQ7LG56 351 aa14.56□□□□□ -0.08
VLDLR-202ENST00000382099 SAMD7Q7Z3H4 446 aa14.56□□□□□ -0.08
VLDLR-202ENST00000382099 NLGN1Q8N2Q7 840 aa14.56□□□□□ -0.08
VLDLR-202ENST00000382099 CHCHD4Q8N4Q1 142 aa14.56□□□□□ -0.08
VLDLR-202ENST00000382099 OR2T29Q8NH02 315 aa14.56□□□□□ -0.08
VLDLR-202ENST00000382099 SPATA22Q8NHS9 363 aa14.56□□□□□ -0.08
VLDLR-202ENST00000382099 FAM120BQ96EK7 910 aaKnown RBP14.56□□□□□ -0.08
VLDLR-202ENST00000382099 SORCS2Q96PQ0 1159 aa14.56□□□□□ -0.08
VLDLR-202ENST00000382099 HEXA-AS1Q9H8Q6 139 aa14.56□□□□□ -0.08
VLDLR-202ENST00000382099 PDLIM7Q9NR12 457 aa14.56□□□□□ -0.08
VLDLR-202ENST00000382099 PFDN2Q9UHV9 154 aa14.56□□□□□ -0.08
VLDLR-202ENST00000382099 RPH3AQ9Y2J0 694 aaPredicted RBP14.56□□□□□ -0.08
VLDLR-202ENST00000382099 SUPT3HB4E1H0 165 aa14.56□□□□□ -0.08
VLDLR-202ENST00000382099 C9P02748 559 aa14.56□□□□□ -0.08
VLDLR-202ENST00000382099 PTPRAP18433 802 aa14.56□□□□□ -0.08
VLDLR-202ENST00000382099 CHMP24386 653 aa14.56□□□□□ -0.08
VLDLR-202ENST00000382099 DNASE1P24855 282 aa14.56□□□□□ -0.08
VLDLR-202ENST00000382099 JAK3P52333 1124 aa14.56□□□□□ -0.08
VLDLR-202ENST00000382099 SLC6A3Q01959 620 aa14.56□□□□□ -0.08
VLDLR-202ENST00000382099 ADAM15Q13444 863 aa14.56□□□□□ -0.08
VLDLR-202ENST00000382099 INO80DQ53TQ3 878 aaPredicted RBP14.56□□□□□ -0.08
VLDLR-202ENST00000382099 DDI2Q5TDH0 399 aa14.56□□□□□ -0.08
VLDLR-202ENST00000382099 ASB18Q6ZVZ8 466 aa14.56□□□□□ -0.08
VLDLR-202ENST00000382099 SPATA19Q7Z5L4 167 aa14.56□□□□□ -0.08
VLDLR-202ENST00000382099 ESAMQ96AP7 390 aa14.56□□□□□ -0.08
VLDLR-202ENST00000382099 PADI2Q9Y2J8 665 aa14.56□□□□□ -0.08
VLDLR-202ENST00000382099 MROH6A6NGR9 719 aa14.56□□□□□ -0.08
VLDLR-202ENST00000382099 MMP20O60882 483 aa14.56□□□□□ -0.08
VLDLR-202ENST00000382099 STAU1O95793 577 aaKnown RBP14.56□□□□□ -0.08
VLDLR-202ENST00000382099 ANXA3P12429 323 aa14.56□□□□□ -0.08
VLDLR-202ENST00000382099 PTX3P26022 381 aaPredicted RBP14.56□□□□□ -0.08
VLDLR-202ENST00000382099 SPOUT1Q5T280 376 aaKnown RBP14.56□□□□□ -0.08
VLDLR-202ENST00000382099 DNAJC22Q8N4W6 341 aa14.56□□□□□ -0.08
VLDLR-202ENST00000382099 PROKR1Q8TCW9 393 aa14.56□□□□□ -0.08
VLDLR-202ENST00000382099 RNF139Q8WU17 664 aa14.56□□□□□ -0.08
VLDLR-202ENST00000382099 CXorf58Q96LI9 332 aa14.56□□□□□ -0.08
VLDLR-202ENST00000382099 IKZF5Q9H5V7 419 aa14.56□□□□□ -0.08
VLDLR-202ENST00000382099 GORASP2Q9H8Y8 452 aa14.56□□□□□ -0.08
VLDLR-202ENST00000382099 DUSP12Q9UNI6 340 aa14.56□□□□□ -0.08
VLDLR-202ENST00000382099 CRYL1Q9Y2S2 319 aa14.56□□□□□ -0.08
VLDLR-202ENST00000382099 CSNK1G3Q9Y6M4 447 aa14.56□□□□□ -0.08
VLDLR-202ENST00000382099 COL1A2P08123 1366 aa14.55□□□□□ -0.08
VLDLR-202ENST00000382099 SCN4AP35499 1836 aa14.55□□□□□ -0.08
VLDLR-202ENST00000382099 FAM74A7A6NL05 159 aa14.55□□□□□ -0.08
VLDLR-202ENST00000382099 CD3EAPO15446 510 aaKnown RBP14.55□□□□□ -0.08
VLDLR-202ENST00000382099 MAFO75444 373 aaPredicted RBP14.55□□□□□ -0.08
VLDLR-202ENST00000382099 NPM3O75607 178 aaKnown RBP14.55□□□□□ -0.08
VLDLR-202ENST00000382099 EDN1P05305 212 aa14.55□□□□□ -0.08
VLDLR-202ENST00000382099 SLC2A3P11169 496 aa14.55□□□□□ -0.08
VLDLR-202ENST00000382099 SDHBP21912 280 aa14.55□□□□□ -0.08
VLDLR-202ENST00000382099 HOXA9P31269 272 aa14.55□□□□□ -0.08
VLDLR-202ENST00000382099 DCDC1P59894 354 aa14.55□□□□□ -0.08
VLDLR-202ENST00000382099 GTDC1Q4AE62 458 aa14.55□□□□□ -0.08
VLDLR-202ENST00000382099 FAM74A3Q4VXF1 159 aa14.55□□□□□ -0.08
VLDLR-202ENST00000382099 USP39Q53GS9 565 aaKnown RBP14.55□□□□□ -0.08
VLDLR-202ENST00000382099 KLHL22Q53GT1 634 aa14.55□□□□□ -0.08
VLDLR-202ENST00000382099 MSANTD2Q6P1R3 559 aa14.55□□□□□ -0.08
VLDLR-202ENST00000382099 SLC16A13Q7RTY0 426 aa14.55□□□□□ -0.08
VLDLR-202ENST00000382099 PPHLN1Q8NEY8 458 aaKnown RBP14.55□□□□□ -0.08
VLDLR-202ENST00000382099 OR6P1Q8NGX9 317 aa14.55□□□□□ -0.08
VLDLR-202ENST00000382099 GTF3C2Q8WUA4 911 aaPredicted RBP14.55□□□□□ -0.08
VLDLR-202ENST00000382099 COPS5Q92905 334 aa14.55□□□□□ -0.08
VLDLR-202ENST00000382099 ZCCHC4Q9H5U6 513 aa14.55□□□□□ -0.08
VLDLR-202ENST00000382099 ESRP2Q9H6T0 727 aaKnown RBP14.55□□□□□ -0.08
VLDLR-202ENST00000382099 PCDHA10Q9Y5I2 948 aa14.55□□□□□ -0.08
VLDLR-202ENST00000382099 GFRA2O00451 464 aa14.55□□□□□ -0.08
VLDLR-202ENST00000382099 PROM1O43490 865 aa14.55□□□□□ -0.08
VLDLR-202ENST00000382099 PSMA1P25786 263 aaKnown RBP14.55□□□□□ -0.08
VLDLR-202ENST00000382099 PRDX3P30048 256 aaKnown RBP14.55□□□□□ -0.08
VLDLR-202ENST00000382099 ZNF91Q05481 1191 aa14.55□□□□□ -0.08
VLDLR-202ENST00000382099 KDM4DQ6B0I6 523 aa14.55□□□□□ -0.08
VLDLR-202ENST00000382099 PIAS4Q8N2W9 510 aaPredicted RBP14.55□□□□□ -0.08
VLDLR-202ENST00000382099 ZNF548Q8NEK5 533 aaPredicted RBP14.55□□□□□ -0.08
VLDLR-202ENST00000382099 OR9Q1Q8NGQ5 310 aa14.55□□□□□ -0.08
VLDLR-202ENST00000382099 TSPEARQ8WU66 669 aa14.55□□□□□ -0.08
VLDLR-202ENST00000382099 PYURFQ96I23 114 aa14.55□□□□□ -0.08
VLDLR-202ENST00000382099 SLC29A3Q9BZD2 475 aa14.55□□□□□ -0.08
VLDLR-202ENST00000382099 CD244Q9BZW8 370 aa14.55□□□□□ -0.08
VLDLR-202ENST00000382099 TINAGQ9UJW2 476 aa14.55□□□□□ -0.08
VLDLR-202ENST00000382099 PRKAB1Q9Y478 270 aa14.55□□□□□ -0.08
VLDLR-202ENST00000382099 LOC105369274A0A096LPK9 316 aa14.54□□□□□ -0.08
VLDLR-202ENST00000382099 KRBOX1C9JBD0 128 aa14.54□□□□□ -0.08
VLDLR-202ENST00000382099 GTPBP1O00178 669 aaKnown RBP14.54□□□□□ -0.08
VLDLR-202ENST00000382099 CCL22O00626 93 aa14.54□□□□□ -0.08
VLDLR-202ENST00000382099 PDCD5O14737 125 aa14.54□□□□□ -0.08
VLDLR-202ENST00000382099 CHP2O43745 196 aa14.54□□□□□ -0.08
VLDLR-202ENST00000382099 RGS11O94810 467 aa14.54□□□□□ -0.08
VLDLR-202ENST00000382099 ATG12O94817 140 aa14.54□□□□□ -0.08
VLDLR-202ENST00000382099 SCELO95171 688 aa14.54□□□□□ -0.08
VLDLR-202ENST00000382099 OLFM2O95897 454 aa14.54□□□□□ -0.08
VLDLR-202ENST00000382099 STOMP27105 288 aa14.54□□□□□ -0.08
VLDLR-202ENST00000382099 CLDN20P56880 219 aa14.54□□□□□ -0.08
VLDLR-202ENST00000382099 EMC2Q15006 297 aa14.54□□□□□ -0.08
VLDLR-202ENST00000382099 Q3ZCU0 254 aa14.54□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms