RNA–Protein interactions for RNA: ENST00000379016.7

HIPK3-202, Transcript of homeodomain interacting protein kinase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HIPK3, Length 7,345 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIPK3-202ENST00000379016 CD52P31358 61 aa12.94□□□□□ -0.34
HIPK3-202ENST00000379016 SOX2P48431 317 aa12.94□□□□□ -0.34
HIPK3-202ENST00000379016 MRPS6P82932 125 aaKnown RBP12.94□□□□□ -0.34
HIPK3-202ENST00000379016 GCNT1Q02742 428 aa12.94□□□□□ -0.34
HIPK3-202ENST00000379016 KLF1Q13351 362 aaPredicted RBP12.94□□□□□ -0.34
HIPK3-202ENST00000379016 MAB21L1Q13394 359 aa12.94□□□□□ -0.34
HIPK3-202ENST00000379016 IRF5Q13568 498 aa12.94□□□□□ -0.34
HIPK3-202ENST00000379016 MOV10Q9HCE1 1003 aaKnown RBP12.94□□□□□ -0.34
HIPK3-202ENST00000379016 RNF215Q9Y6U7 377 aa12.94□□□□□ -0.34
HIPK3-202ENST00000379016 SAMD9Q5K651 1589 aa12.94□□□□□ -0.34
HIPK3-202ENST00000379016 GRB10Q13322 594 aa12.94□□□□□ -0.34
HIPK3-202ENST00000379016 SLC41A3Q96GZ6 507 aa12.94□□□□□ -0.34
HIPK3-202ENST00000379016 P2RX7Q99572 595 aaKnown RBP12.94□□□□□ -0.34
HIPK3-202ENST00000379016 STRADBQ9C0K7 418 aa12.94□□□□□ -0.34
HIPK3-202ENST00000379016 TIMMDC1Q9NPL8 285 aa12.94□□□□□ -0.34
HIPK3-202ENST00000379016 HMX3A6NHT5 357 aa12.93□□□□□ -0.34
HIPK3-202ENST00000379016 FGF19O95750 216 aa12.93□□□□□ -0.34
HIPK3-202ENST00000379016 SHBGP04278 402 aa12.93□□□□□ -0.34
HIPK3-202ENST00000379016 YES1P07947 543 aa12.93□□□□□ -0.34
HIPK3-202ENST00000379016 UBE2NP61088 152 aaKnown RBP12.93□□□□□ -0.34
HIPK3-202ENST00000379016 ADGRE1Q14246 886 aa12.93□□□□□ -0.34
HIPK3-202ENST00000379016 PAMR1Q6UXH9 720 aa12.93□□□□□ -0.34
HIPK3-202ENST00000379016 HDAC7Q8WUI4 952 aa12.93□□□□□ -0.34
HIPK3-202ENST00000379016 SLC44A1Q8WWI5 657 aa12.93□□□□□ -0.34
HIPK3-202ENST00000379016 RPL10LQ96L21 214 aaKnown RBP12.93□□□□□ -0.34
HIPK3-202ENST00000379016 WDR55Q9H6Y2 383 aaPredicted RBP12.93□□□□□ -0.34
HIPK3-202ENST00000379016 CHST7Q9NS84 486 aa12.93□□□□□ -0.34
HIPK3-202ENST00000379016 KLHL42Q9P2K6 505 aa12.93□□□□□ -0.34
HIPK3-202ENST00000379016 PCDHB14Q9Y5E9 798 aa12.93□□□□□ -0.34
HIPK3-202ENST00000379016 OVOS2A0A0G2JMS6 1433 aa12.93□□□□□ -0.34
HIPK3-202ENST00000379016 OVOS2A0A0J9YW53 1432 aa12.93□□□□□ -0.34
HIPK3-202ENST00000379016 OVOS2Q6IE36 1432 aa12.93□□□□□ -0.34
HIPK3-202ENST00000379016 A0A087WUU8 490 aa12.93□□□□□ -0.34
HIPK3-202ENST00000379016 TSTD3H0UI37 97 aa12.93□□□□□ -0.34
HIPK3-202ENST00000379016 ATE1O95260 518 aa12.93□□□□□ -0.34
HIPK3-202ENST00000379016 DIRAS3O95661 229 aa12.93□□□□□ -0.34
HIPK3-202ENST00000379016 GJA5P36382 358 aa12.93□□□□□ -0.34
HIPK3-202ENST00000379016 CD79BP40259 229 aa12.93□□□□□ -0.34
HIPK3-202ENST00000379016 PDE12Q6L8Q7 609 aaKnown RBP12.93□□□□□ -0.34
HIPK3-202ENST00000379016 PIWIL4Q7Z3Z4 852 aaKnown RBP12.93□□□□□ -0.34
HIPK3-202ENST00000379016 CMC1Q7Z7K0 106 aa12.93□□□□□ -0.34
HIPK3-202ENST00000379016 AMBNQ9NP70 447 aa12.93□□□□□ -0.34
HIPK3-202ENST00000379016 PCDHA2Q9Y5H9 948 aa12.93□□□□□ -0.34
HIPK3-202ENST00000379016 UGT1A4P22310 534 aa12.93□□□□□ -0.34
HIPK3-202ENST00000379016 TUBA4AP68366 448 aa12.93□□□□□ -0.34
HIPK3-202ENST00000379016 GNA12Q03113 381 aa12.93□□□□□ -0.34
HIPK3-202ENST00000379016 PPIGQ13427 754 aaKnown RBP eCLIP12.93□□□□□ -0.34
HIPK3-202ENST00000379016 SGMS1Q86VZ5 419 aa12.93□□□□□ -0.34
HIPK3-202ENST00000379016 KCNN1Q92952 543 aa12.93□□□□□ -0.34
HIPK3-202ENST00000379016 SNRNP25Q9BV90 132 aaKnown RBP12.93□□□□□ -0.34
HIPK3-202ENST00000379016 POLR2J3Q9H1A7 115 aaKnown RBP12.93□□□□□ -0.34
HIPK3-202ENST00000379016 LRRN3Q9H3W5 708 aa12.93□□□□□ -0.34
HIPK3-202ENST00000379016 TCAF2A6NFQ2 919 aa12.93□□□□□ -0.34
HIPK3-202ENST00000379016 SEC14L6B5MCN3 397 aa12.93□□□□□ -0.34
HIPK3-202ENST00000379016 ACOX3O15254 700 aa12.93□□□□□ -0.34
HIPK3-202ENST00000379016 ENSAO43768 121 aaKnown RBP12.93□□□□□ -0.34
HIPK3-202ENST00000379016 PAGE1O75459 146 aa12.93□□□□□ -0.34
HIPK3-202ENST00000379016 OR8U9P0C7N5 309 aa12.93□□□□□ -0.34
HIPK3-202ENST00000379016 BORAQ6PGQ7 559 aa12.93□□□□□ -0.34
HIPK3-202ENST00000379016 HHIPL2Q6UWX4 724 aa12.93□□□□□ -0.34
HIPK3-202ENST00000379016 ZNF584Q8IVC4 421 aa12.93□□□□□ -0.34
HIPK3-202ENST00000379016 PTGES2Q9H7Z7 377 aa12.93□□□□□ -0.34
HIPK3-202ENST00000379016 CARS2Q9HA77 564 aaKnown RBP12.93□□□□□ -0.34
HIPK3-202ENST00000379016 STK16O75716 305 aa12.93□□□□□ -0.34
HIPK3-202ENST00000379016 PRNPP04156 253 aa12.93□□□□□ -0.34
HIPK3-202ENST00000379016 FGF1P05230 155 aa12.93□□□□□ -0.34
HIPK3-202ENST00000379016 CD36P16671 472 aa12.93□□□□□ -0.34
HIPK3-202ENST00000379016 CDK18Q07002 472 aa12.93□□□□□ -0.34
HIPK3-202ENST00000379016 ZNF517Q6ZMY9 492 aaPredicted RBP12.93□□□□□ -0.34
HIPK3-202ENST00000379016 TRIM46Q7Z4K8 759 aa12.93□□□□□ -0.34
HIPK3-202ENST00000379016 FAM86B1Q8N7N1 296 aa12.93□□□□□ -0.34
HIPK3-202ENST00000379016 OR2A12Q8NGT7 310 aa12.93□□□□□ -0.34
HIPK3-202ENST00000379016 NDNFQ8TB73 568 aa12.93□□□□□ -0.34
HIPK3-202ENST00000379016 NSMAFQ92636 917 aa12.93□□□□□ -0.34
HIPK3-202ENST00000379016 ZMYM2Q9UBW7 1377 aa12.93□□□□□ -0.34
HIPK3-202ENST00000379016 ZNF609O15014 1411 aa12.93□□□□□ -0.34
HIPK3-202ENST00000379016 A0A1B0GVM2 712 aa12.93□□□□□ -0.34
HIPK3-202ENST00000379016 FCER1GP30273 86 aa12.93□□□□□ -0.34
HIPK3-202ENST00000379016 GRIA2P42262 883 aa12.93□□□□□ -0.34
HIPK3-202ENST00000379016 LIMK2P53671 638 aa12.93□□□□□ -0.34
HIPK3-202ENST00000379016 OAZ1P54368 228 aa12.93□□□□□ -0.34
HIPK3-202ENST00000379016 SLC35F1Q5T1Q4 408 aa12.93□□□□□ -0.34
HIPK3-202ENST00000379016 BBS12Q6ZW61 710 aa12.93□□□□□ -0.34
HIPK3-202ENST00000379016 GATSQ8NAP1 163 aa12.93□□□□□ -0.34
HIPK3-202ENST00000379016 HSPBAP1Q96EW2 488 aa12.93□□□□□ -0.34
HIPK3-202ENST00000379016 GPR21Q99679 349 aa12.93□□□□□ -0.34
HIPK3-202ENST00000379016 PCDHB1Q9Y5F3 818 aa12.93□□□□□ -0.34
HIPK3-202ENST00000379016 ADGRL2O95490 1459 aa12.92□□□□□ -0.34
HIPK3-202ENST00000379016 MTMR11A4FU01 709 aa12.92□□□□□ -0.34
HIPK3-202ENST00000379016 CAPN8A6NHC0 703 aa12.92□□□□□ -0.34
HIPK3-202ENST00000379016 ELNP15502 786 aa12.92□□□□□ -0.34
HIPK3-202ENST00000379016 THBS2P35442 1172 aa12.92□□□□□ -0.34
HIPK3-202ENST00000379016 CCR8P51685 355 aa12.92□□□□□ -0.34
HIPK3-202ENST00000379016 FXYD4P59646 89 aa12.92□□□□□ -0.34
HIPK3-202ENST00000379016 SCAPQ12770 1279 aa12.92□□□□□ -0.34
HIPK3-202ENST00000379016 PRKD1Q15139 912 aaPredicted RBP12.92□□□□□ -0.34
HIPK3-202ENST00000379016 ANKDD1AQ495B1 522 aa12.92□□□□□ -0.34
HIPK3-202ENST00000379016 FAM160A2Q8N612 972 aaPredicted RBP12.92□□□□□ -0.34
HIPK3-202ENST00000379016 OR2T27Q8NH04 317 aa12.92□□□□□ -0.34
HIPK3-202ENST00000379016 CDRT1O95170 752 aa12.92□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms