RNA–Protein interactions for RNA: ENST00000376228.9

HLA-C-201, Transcript of major histocompatibility complex, class I, C, humanhuman

APPRIS P2 BASIC

Gene HLA-C, Length 1,536 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-C-201ENST00000376228 INAVAQ3KP66 663 aa20.35■□□□□ 0.85
HLA-C-201ENST00000376228 C6orf163Q5TEZ5 329 aa20.35■□□□□ 0.85
HLA-C-201ENST00000376228 CACHD1Q5VU97 1274 aa20.35■□□□□ 0.85
HLA-C-201ENST00000376228 MED27Q6P2C8 311 aa20.35■□□□□ 0.85
HLA-C-201ENST00000376228 NXPE4Q6UWF7 544 aa20.35■□□□□ 0.85
HLA-C-201ENST00000376228 BNC2Q6ZN30 1099 aaPredicted RBP20.35■□□□□ 0.85
HLA-C-201ENST00000376228 SLCO6A1Q86UG4 719 aa20.35■□□□□ 0.85
HLA-C-201ENST00000376228 PARGQ86W56 976 aa20.35■□□□□ 0.85
HLA-C-201ENST00000376228 DCP2Q8IU60 420 aaKnown RBP20.35■□□□□ 0.85
HLA-C-201ENST00000376228 FBXW8Q8N3Y1 598 aa20.35■□□□□ 0.85
HLA-C-201ENST00000376228 SPDL1Q96EA4 605 aa20.35■□□□□ 0.85
HLA-C-201ENST00000376228 PDXPQ96GD0 296 aa20.35■□□□□ 0.85
HLA-C-201ENST00000376228 FERD3LQ96RJ6 166 aa20.35■□□□□ 0.85
HLA-C-201ENST00000376228 CDC6Q99741 560 aa20.35■□□□□ 0.85
HLA-C-201ENST00000376228 ACTL8Q9H568 366 aa20.35■□□□□ 0.85
HLA-C-201ENST00000376228 TOR4AQ9NXH8 423 aa20.35■□□□□ 0.85
HLA-C-201ENST00000376228 FTSJ1Q9UET6 329 aa20.35■□□□□ 0.85
HLA-C-201ENST00000376228 KLF15Q9UIH9 416 aa20.35■□□□□ 0.85
HLA-C-201ENST00000376228 PNMA8BQ9ULN7 279 aaPredicted RBP20.35■□□□□ 0.85
HLA-C-201ENST00000376228 PPT2Q9UMR5 302 aa20.35■□□□□ 0.85
HLA-C-201ENST00000376228 TDRKHQ9Y2W6 561 aaKnown RBP20.35■□□□□ 0.85
HLA-C-201ENST00000376228 KDM1AO60341 852 aa20.34■□□□□ 0.85
HLA-C-201ENST00000376228 CAPN3P20807 821 aa20.34■□□□□ 0.85
HLA-C-201ENST00000376228 NEK2P51955 445 aa20.34■□□□□ 0.85
HLA-C-201ENST00000376228 POLR2JP52435 117 aaKnown RBP20.34■□□□□ 0.85
HLA-C-201ENST00000376228 KCNK10P57789 538 aa20.34■□□□□ 0.85
HLA-C-201ENST00000376228 SRP54P61011 504 aaKnown RBP20.34■□□□□ 0.85
HLA-C-201ENST00000376228 CCDC157Q569K6 752 aa20.34■□□□□ 0.85
HLA-C-201ENST00000376228 GLRX5Q86SX6 157 aa20.34■□□□□ 0.85
HLA-C-201ENST00000376228 SLC25A45Q8N413 288 aa20.34■□□□□ 0.85
HLA-C-201ENST00000376228 GLB1L3Q8NCI6 653 aaPredicted RBP20.34■□□□□ 0.85
HLA-C-201ENST00000376228 OR7G3Q8NG95 312 aa20.34■□□□□ 0.85
HLA-C-201ENST00000376228 UBE2E3Q969T4 207 aa20.34■□□□□ 0.85
HLA-C-201ENST00000376228 MTFMTQ96DP5 389 aaKnown RBP20.34■□□□□ 0.85
HLA-C-201ENST00000376228 CLPTM1LQ96KA5 538 aa20.34■□□□□ 0.85
HLA-C-201ENST00000376228 TEX37Q96LM6 180 aa20.34■□□□□ 0.85
HLA-C-201ENST00000376228 IL17FQ96PD4 163 aa20.34■□□□□ 0.85
HLA-C-201ENST00000376228 PELI2Q9HAT8 420 aa20.34■□□□□ 0.85
HLA-C-201ENST00000376228 POLR3HQ9Y535 204 aaPredicted RBP20.34■□□□□ 0.85
HLA-C-201ENST00000376228 PTPRBP23467 1997 aa20.34■□□□□ 0.85
HLA-C-201ENST00000376228 FOXE1O00358 373 aaPredicted RBP20.33■□□□□ 0.85
HLA-C-201ENST00000376228 NR5A2O00482 541 aa20.33■□□□□ 0.85
HLA-C-201ENST00000376228 ANGPT2O15123 496 aa20.33■□□□□ 0.85
HLA-C-201ENST00000376228 HYAL3O43820 417 aaPredicted RBP20.33■□□□□ 0.85
HLA-C-201ENST00000376228 EEDO75530 441 aaKnown RBP20.33■□□□□ 0.85
HLA-C-201ENST00000376228 PIAS2O75928 621 aa20.33■□□□□ 0.85
HLA-C-201ENST00000376228 NPPAP01160 153 aa20.33■□□□□ 0.85
HLA-C-201ENST00000376228 MTHFD1P11586 935 aaKnown RBP20.33■□□□□ 0.85
HLA-C-201ENST00000376228 NDUFS1P28331 727 aa20.33■□□□□ 0.85
HLA-C-201ENST00000376228 EIF2B5Q13144 721 aaKnown RBP20.33■□□□□ 0.85
HLA-C-201ENST00000376228 RPE65Q16518 533 aa20.33■□□□□ 0.85
HLA-C-201ENST00000376228 HIST2H2ACQ16777 129 aaPredicted RBP20.33■□□□□ 0.85
HLA-C-201ENST00000376228 HIST2H2AA3Q6FI13 130 aa20.33■□□□□ 0.85
HLA-C-201ENST00000376228 SUSD1Q6UWL2 747 aa20.33■□□□□ 0.85
HLA-C-201ENST00000376228 TMPRSS11BQ86T26 416 aa20.33■□□□□ 0.85
HLA-C-201ENST00000376228 CNDP2Q96KP4 475 aaKnown RBP20.33■□□□□ 0.85
HLA-C-201ENST00000376228 HOPXQ9BPY8 73 aaPredicted RBP20.33■□□□□ 0.85
HLA-C-201ENST00000376228 PITHD1Q9GZP4 211 aaPredicted RBP20.33■□□□□ 0.85
HLA-C-201ENST00000376228 TCEAL2Q9H3H9 227 aaPredicted RBP20.33■□□□□ 0.85
HLA-C-201ENST00000376228 GEMIN8Q9NWZ8 242 aaKnown RBP20.33■□□□□ 0.85
HLA-C-201ENST00000376228 MAP10Q9P2G4 905 aa20.33■□□□□ 0.85
HLA-C-201ENST00000376228 VPS29Q9UBQ0 182 aa20.33■□□□□ 0.85
HLA-C-201ENST00000376228 BAIAP2L1Q9UHR4 511 aa20.33■□□□□ 0.85
HLA-C-201ENST00000376228 ANGPTL2Q9UKU9 493 aa20.33■□□□□ 0.85
HLA-C-201ENST00000376228 PCDHGA7Q9Y5G6 932 aa20.33■□□□□ 0.85
HLA-C-201ENST00000376228 CFAP20Q9Y6A4 193 aaKnown RBP20.33■□□□□ 0.85
HLA-C-201ENST00000376228 AMD1P17707 334 aa20.32■□□□□ 0.84
HLA-C-201ENST00000376228 VARSP26640 1264 aaKnown RBP20.32■□□□□ 0.84
HLA-C-201ENST00000376228 IL12AP29459 219 aa20.32■□□□□ 0.84
HLA-C-201ENST00000376228 PKLRP30613 574 aa20.32■□□□□ 0.84
HLA-C-201ENST00000376228 RAB28P51157 221 aa20.32■□□□□ 0.84
HLA-C-201ENST00000376228 NME5P56597 212 aa20.32■□□□□ 0.84
HLA-C-201ENST00000376228 ACTR3P61158 418 aa20.32■□□□□ 0.84
HLA-C-201ENST00000376228 PSME3P61289 254 aa20.32■□□□□ 0.84
HLA-C-201ENST00000376228 FOXM1Q08050 763 aa20.32■□□□□ 0.84
HLA-C-201ENST00000376228 SNCBQ16143 134 aa20.32■□□□□ 0.84
HLA-C-201ENST00000376228 ALG11Q2TAA5 492 aa20.32■□□□□ 0.84
HLA-C-201ENST00000376228 PIGGQ5H8A4 983 aa20.32■□□□□ 0.84
HLA-C-201ENST00000376228 RETREG3Q86VR2 466 aa20.32■□□□□ 0.84
HLA-C-201ENST00000376228 FAM129CQ86XR2 697 aa20.32■□□□□ 0.84
HLA-C-201ENST00000376228 OR2L8Q8NGY9 312 aa20.32■□□□□ 0.84
HLA-C-201ENST00000376228 WDR60Q8WVS4 1066 aa20.32■□□□□ 0.84
HLA-C-201ENST00000376228 C11orf24Q96F05 449 aaPredicted RBP20.32■□□□□ 0.84
HLA-C-201ENST00000376228 KIR3DX1Q9H7L2 352 aa20.32■□□□□ 0.84
HLA-C-201ENST00000376228 SIRT5Q9NXA8 310 aa20.32■□□□□ 0.84
HLA-C-201ENST00000376228 CROTQ9UKG9 612 aa20.32■□□□□ 0.84
HLA-C-201ENST00000376228 PLAGL1Q9UM63 463 aa20.32■□□□□ 0.84
HLA-C-201ENST00000376228 SH2B3Q9UQQ2 575 aa20.32■□□□□ 0.84
HLA-C-201ENST00000376228 COLEC10Q9Y6Z7 277 aa20.32■□□□□ 0.84
HLA-C-201ENST00000376228 HEATR5BQ9P2D3 2071 aa20.32■□□□□ 0.84
HLA-C-201ENST00000376228 A0A1W2PPV9 198 aa20.32■□□□□ 0.84
HLA-C-201ENST00000376228 PDZK1P1A8MUH7 402 aa20.32■□□□□ 0.84
HLA-C-201ENST00000376228 TNFSF14O43557 240 aa20.32■□□□□ 0.84
HLA-C-201ENST00000376228 LDOC1O95751 146 aaPredicted RBP20.32■□□□□ 0.84
HLA-C-201ENST00000376228 CSF2P04141 144 aa20.32■□□□□ 0.84
HLA-C-201ENST00000376228 BCKDHAP12694 445 aa20.32■□□□□ 0.84
HLA-C-201ENST00000376228 NME1P15531 152 aaKnown RBP20.32■□□□□ 0.84
HLA-C-201ENST00000376228 JUNDP17535 347 aa20.32■□□□□ 0.84
HLA-C-201ENST00000376228 TLR1Q15399 786 aa20.32■□□□□ 0.84
HLA-C-201ENST00000376228 VPS26BQ4G0F5 336 aa20.32■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms