RNA–Protein interactions for RNA: ENST00000375290.6

PTCH1-204, Transcript of patched 1, humanhuman

TSL 2

Gene PTCH1, Length 10,631 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-204ENST00000375290 CAPN5O15484 640 aaPredicted RBP9.9□□□□□ -0.82
PTCH1-204ENST00000375290 JRKO75564 520 aa9.9□□□□□ -0.82
PTCH1-204ENST00000375290 CCR8P51685 355 aa9.9□□□□□ -0.82
PTCH1-204ENST00000375290 EID2Q8N6I1 236 aa9.9□□□□□ -0.82
PTCH1-204ENST00000375290 SLC9A6Q92581 669 aa9.9□□□□□ -0.82
PTCH1-204ENST00000375290 DNASE1L2Q92874 299 aa9.9□□□□□ -0.82
PTCH1-204ENST00000375290 SIPA1Q96FS4 1042 aa9.9□□□□□ -0.82
PTCH1-204ENST00000375290 PIP5K1AQ99755 562 aa9.9□□□□□ -0.82
PTCH1-204ENST00000375290 A0A1W2PRB8 838 aa9.9□□□□□ -0.82
PTCH1-204ENST00000375290 A0A1W2PRQ8 180 aa9.9□□□□□ -0.82
PTCH1-204ENST00000375290 HMX3A6NHT5 357 aa9.9□□□□□ -0.82
PTCH1-204ENST00000375290 TREHO43280 583 aa9.9□□□□□ -0.82
PTCH1-204ENST00000375290 ZNF763Q0D2J5 394 aa9.9□□□□□ -0.82
PTCH1-204ENST00000375290 NOMO2Q5JPE7 1267 aa9.9□□□□□ -0.82
PTCH1-204ENST00000375290 SERPINA9Q86WD7 417 aa9.9□□□□□ -0.82
PTCH1-204ENST00000375290 C14orf166Q9Y224 244 aaKnown RBP9.9□□□□□ -0.82
PTCH1-204ENST00000375290 SLC1A7O00341 560 aa9.9□□□□□ -0.82
PTCH1-204ENST00000375290 CDC40O60508 579 aaKnown RBP eCLIP9.9□□□□□ -0.82
PTCH1-204ENST00000375290 PTPRAP18433 802 aa9.9□□□□□ -0.82
PTCH1-204ENST00000375290 LILRA4P59901 499 aa9.9□□□□□ -0.82
PTCH1-204ENST00000375290 CYP4F8P98187 520 aa9.9□□□□□ -0.82
PTCH1-204ENST00000375290 TBCEQ15813 527 aaPredicted RBP9.9□□□□□ -0.82
PTCH1-204ENST00000375290 ABCA11PQ4W5N1 156 aa9.9□□□□□ -0.82
PTCH1-204ENST00000375290 C12orf29Q8N999 325 aa9.9□□□□□ -0.82
PTCH1-204ENST00000375290 ZNF563Q8TA94 476 aa9.9□□□□□ -0.82
PTCH1-204ENST00000375290 EXO5Q9H790 373 aa9.9□□□□□ -0.82
PTCH1-204ENST00000375290 PAQR5Q9NXK6 330 aaPredicted RBP9.9□□□□□ -0.82
PTCH1-204ENST00000375290 ABCD2Q9UBJ2 740 aa9.9□□□□□ -0.82
PTCH1-204ENST00000375290 IKZF2Q9UKS7 526 aa9.9□□□□□ -0.82
PTCH1-204ENST00000375290 NAV1Q8NEY1 1877 aa9.9□□□□□ -0.82
PTCH1-204ENST00000375290 PCDH7O60245 1069 aa9.9□□□□□ -0.82
PTCH1-204ENST00000375290 HK1P19367 917 aa9.9□□□□□ -0.82
PTCH1-204ENST00000375290 IDSP22304 550 aa9.9□□□□□ -0.82
PTCH1-204ENST00000375290 ETV1P50549 477 aa9.9□□□□□ -0.82
PTCH1-204ENST00000375290 FAM180AQ6UWF9 173 aa9.9□□□□□ -0.82
PTCH1-204ENST00000375290 FIBCD1Q8N539 461 aa9.9□□□□□ -0.82
PTCH1-204ENST00000375290 ASPNQ9BXN1 380 aa9.9□□□□□ -0.82
PTCH1-204ENST00000375290 FAM105AQ9NUU6 356 aa9.9□□□□□ -0.82
PTCH1-204ENST00000375290 MS4A12Q9NXJ0 267 aa9.9□□□□□ -0.82
PTCH1-204ENST00000375290 ZNF670-ZNF695F2Z2N8 137 aa9.9□□□□□ -0.83
PTCH1-204ENST00000375290 KDM4BO94953 1096 aa9.9□□□□□ -0.83
PTCH1-204ENST00000375290 C1RP00736 705 aa9.9□□□□□ -0.83
PTCH1-204ENST00000375290 PBLDP30039 288 aaPredicted RBP9.9□□□□□ -0.83
PTCH1-204ENST00000375290 HSPA7P48741 367 aa9.9□□□□□ -0.83
PTCH1-204ENST00000375290 SUOXP51687 545 aa9.9□□□□□ -0.83
PTCH1-204ENST00000375290 INHBCP55103 352 aa9.9□□□□□ -0.83
PTCH1-204ENST00000375290 KCNAB2Q13303 367 aa9.9□□□□□ -0.83
PTCH1-204ENST00000375290 ELP5Q8TE02 316 aa9.9□□□□□ -0.83
PTCH1-204ENST00000375290 ADAMTS19Q8TE59 1207 aa9.9□□□□□ -0.83
PTCH1-204ENST00000375290 TSNAXQ99598 290 aaKnown RBP9.9□□□□□ -0.83
PTCH1-204ENST00000375290 SLC35A5Q9BS91 424 aa9.9□□□□□ -0.83
PTCH1-204ENST00000375290 PDZD7Q9H5P4 517 aa9.9□□□□□ -0.83
PTCH1-204ENST00000375290 PRDM5Q9NQX1 630 aaPredicted RBP9.9□□□□□ -0.83
PTCH1-204ENST00000375290 HEBP1Q9NRV9 189 aa9.9□□□□□ -0.83
PTCH1-204ENST00000375290 SLC39A1Q9NY26 324 aa9.9□□□□□ -0.83
PTCH1-204ENST00000375290 MAP4K5Q9Y4K4 846 aa9.9□□□□□ -0.83
PTCH1-204ENST00000375290 BAZ2AQ9UIF9 1905 aaKnown RBP9.9□□□□□ -0.83
PTCH1-204ENST00000375290 IFNA1P01562 189 aa9.9□□□□□ -0.83
PTCH1-204ENST00000375290 FSHRP23945 695 aa9.9□□□□□ -0.83
PTCH1-204ENST00000375290 RPL10P27635 214 aaKnown RBP9.9□□□□□ -0.83
PTCH1-204ENST00000375290 AIMP2Q13155 320 aaKnown RBP9.9□□□□□ -0.83
PTCH1-204ENST00000375290 LRIF1Q5T3J3 769 aa9.9□□□□□ -0.83
PTCH1-204ENST00000375290 SHKBP1Q8TBC3 707 aa9.9□□□□□ -0.83
PTCH1-204ENST00000375290 BORCS6Q96GS4 357 aa9.9□□□□□ -0.83
PTCH1-204ENST00000375290 ALPK1Q96QP1 1244 aa9.9□□□□□ -0.83
PTCH1-204ENST00000375290 NKIRAS2Q9NYR9 191 aa9.9□□□□□ -0.83
PTCH1-204ENST00000375290 hCG_2039718K7EN88 272 aa9.89□□□□□ -0.83
PTCH1-204ENST00000375290 KCNQ2O43526 872 aa9.89□□□□□ -0.83
PTCH1-204ENST00000375290 PSMA6P60900 246 aaKnown RBP9.89□□□□□ -0.83
PTCH1-204ENST00000375290 DNASE1L3Q13609 305 aa9.89□□□□□ -0.83
PTCH1-204ENST00000375290 AGAP7PQ5VUJ5 663 aa9.89□□□□□ -0.83
PTCH1-204ENST00000375290 OR2T33Q8NG76 320 aa9.89□□□□□ -0.83
PTCH1-204ENST00000375290 FUNDC2Q9BWH2 189 aa9.89□□□□□ -0.83
PTCH1-204ENST00000375290 ZDHHC3Q9NYG2 299 aa9.89□□□□□ -0.83
PTCH1-204ENST00000375290 TMEM181Q9P2C4 612 aa9.89□□□□□ -0.83
PTCH1-204ENST00000375290 UQCRC1P31930 480 aa9.89□□□□□ -0.83
PTCH1-204ENST00000375290 PITPNBP48739 271 aa9.89□□□□□ -0.83
PTCH1-204ENST00000375290 PFKPQ01813 784 aa9.89□□□□□ -0.83
PTCH1-204ENST00000375290 TAGLNQ01995 201 aaKnown RBP9.89□□□□□ -0.83
PTCH1-204ENST00000375290 RNF44Q7L0R7 432 aa9.89□□□□□ -0.83
PTCH1-204ENST00000375290 SERPINA11Q86U17 422 aa9.89□□□□□ -0.83
PTCH1-204ENST00000375290 KATNBL1Q9H079 304 aa9.89□□□□□ -0.83
PTCH1-204ENST00000375290 C11orf16Q9NQ32 467 aa9.89□□□□□ -0.83
PTCH1-204ENST00000375290 SDR39U1Q9NRG7 319 aaPredicted RBP9.89□□□□□ -0.83
PTCH1-204ENST00000375290 ERAL1O75616 437 aaKnown RBP9.89□□□□□ -0.83
PTCH1-204ENST00000375290 CDK4P11802 303 aa9.89□□□□□ -0.83
PTCH1-204ENST00000375290 MAGEA12P43365 314 aa9.89□□□□□ -0.83
PTCH1-204ENST00000375290 IRF5Q13568 498 aa9.89□□□□□ -0.83
PTCH1-204ENST00000375290 OR8K5Q8NH50 307 aa9.89□□□□□ -0.83
PTCH1-204ENST00000375290 XAGE5Q8WWM1 108 aa9.89□□□□□ -0.83
PTCH1-204ENST00000375290 ZFP3Q96NJ6 502 aa9.89□□□□□ -0.83
PTCH1-204ENST00000375290 GPR20Q99678 358 aa9.89□□□□□ -0.83
PTCH1-204ENST00000375290 MGLLQ99685 303 aa9.89□□□□□ -0.83
PTCH1-204ENST00000375290 BRD7Q9NPI1 651 aa9.89□□□□□ -0.83
PTCH1-204ENST00000375290 TMPRSS4Q9NRS4 437 aa9.89□□□□□ -0.83
PTCH1-204ENST00000375290 RNF181Q9P0P0 153 aa9.89□□□□□ -0.83
PTCH1-204ENST00000375290 PCDHB11Q9Y5F2 797 aa9.89□□□□□ -0.83
PTCH1-204ENST00000375290 CAPN14A8MX76 684 aa9.89□□□□□ -0.83
PTCH1-204ENST00000375290 LATO43561 262 aa9.89□□□□□ -0.83
PTCH1-204ENST00000375290 GGT1P19440 569 aa9.89□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms