RNA–Protein interactions for RNA: ENST00000374843.8

HLA-DMA-201, Transcript of major histocompatibility complex, class II, DM alpha, humanhuman

APPRIS P1 BASIC

Gene HLA-DMA, Length 1,123 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DMA-201ENST00000374843 B4GAT1O43505 415 aa16.5■□□□□ 0.23
HLA-DMA-201ENST00000374843 CLEC3AO75596 197 aa16.5■□□□□ 0.23
HLA-DMA-201ENST00000374843 SEMA3DO95025 777 aa16.5■□□□□ 0.23
HLA-DMA-201ENST00000374843 SLC34A2O95436 690 aa16.5■□□□□ 0.23
HLA-DMA-201ENST00000374843 C9P02748 559 aa16.5■□□□□ 0.23
HLA-DMA-201ENST00000374843 ALDOCP09972 364 aaKnown RBP16.5■□□□□ 0.23
HLA-DMA-201ENST00000374843 CSF2RBP32927 897 aa16.5■□□□□ 0.23
HLA-DMA-201ENST00000374843 ATP4BP51164 291 aa16.5■□□□□ 0.23
HLA-DMA-201ENST00000374843 OR1D5P58170 312 aa16.5■□□□□ 0.23
HLA-DMA-201ENST00000374843 ERVK-8P63133 956 aa16.5■□□□□ 0.23
HLA-DMA-201ENST00000374843 HMGCS1Q01581 520 aa16.5■□□□□ 0.23
HLA-DMA-201ENST00000374843 SF3A2Q15428 464 aaKnown RBP16.5■□□□□ 0.23
HLA-DMA-201ENST00000374843 CSRP2Q16527 193 aa16.5■□□□□ 0.23
HLA-DMA-201ENST00000374843 IMPG1Q17R60 797 aa16.5■□□□□ 0.23
HLA-DMA-201ENST00000374843 SPDYAQ5MJ70 313 aa16.5■□□□□ 0.23
HLA-DMA-201ENST00000374843 C6orf136Q5SQH8 315 aa16.5■□□□□ 0.23
HLA-DMA-201ENST00000374843 NXNQ6DKJ4 435 aa16.5■□□□□ 0.23
HLA-DMA-201ENST00000374843 FIGLAQ6QHK4 219 aa16.5■□□□□ 0.23
HLA-DMA-201ENST00000374843 WDR74Q6RFH5 385 aaPredicted RBP16.5■□□□□ 0.23
HLA-DMA-201ENST00000374843 SPATA19Q7Z5L4 167 aa16.5■□□□□ 0.23
HLA-DMA-201ENST00000374843 MTDHQ86UE4 582 aaKnown RBP16.5■□□□□ 0.23
HLA-DMA-201ENST00000374843 CPSF7Q8N684 471 aaKnown RBP16.5■□□□□ 0.23
HLA-DMA-201ENST00000374843 ATOH1Q92858 354 aaPredicted RBP16.5■□□□□ 0.23
HLA-DMA-201ENST00000374843 THAP11Q96EK4 314 aa16.5■□□□□ 0.23
HLA-DMA-201ENST00000374843 CMTM7Q96FZ5 175 aa16.5■□□□□ 0.23
HLA-DMA-201ENST00000374843 LRRC37BQ96QE4 947 aa16.5■□□□□ 0.23
HLA-DMA-201ENST00000374843 MTERF1Q99551 399 aaKnown RBP16.5■□□□□ 0.23
HLA-DMA-201ENST00000374843 MS4A8Q9BY19 250 aa16.5■□□□□ 0.23
HLA-DMA-201ENST00000374843 LRTM1Q9HBL6 345 aa16.5■□□□□ 0.23
HLA-DMA-201ENST00000374843 SAR1AQ9NR31 198 aa16.5■□□□□ 0.23
HLA-DMA-201ENST00000374843 C1GALT1Q9NS00 363 aa16.5■□□□□ 0.23
HLA-DMA-201ENST00000374843 C1orf109Q9NX04 203 aa16.5■□□□□ 0.23
HLA-DMA-201ENST00000374843 SEMA5BQ9P283 1151 aa16.5■□□□□ 0.23
HLA-DMA-201ENST00000374843 PILRAQ9UKJ1 303 aa16.5■□□□□ 0.23
HLA-DMA-201ENST00000374843 BTBD3Q9Y2F9 522 aa16.5■□□□□ 0.23
HLA-DMA-201ENST00000374843 HCN4Q9Y3Q4 1203 aa16.5■□□□□ 0.23
HLA-DMA-201ENST00000374843 MYO15AQ9UKN7 3530 aa16.5■□□□□ 0.23
HLA-DMA-201ENST00000374843 PCM1Q15154 2024 aa16.5■□□□□ 0.23
HLA-DMA-201ENST00000374843 SNRNP200O75643 2136 aaKnown RBP16.49■□□□□ 0.23
HLA-DMA-201ENST00000374843 CDX4O14627 284 aaPredicted RBP16.49■□□□□ 0.23
HLA-DMA-201ENST00000374843 SLC22A2O15244 555 aa16.49■□□□□ 0.23
HLA-DMA-201ENST00000374843 OR1F1O43749 312 aa16.49■□□□□ 0.23
HLA-DMA-201ENST00000374843 TBX6O95947 436 aaPredicted RBP16.49■□□□□ 0.23
HLA-DMA-201ENST00000374843 MYF5P13349 255 aa16.49■□□□□ 0.23
HLA-DMA-201ENST00000374843 HOXB3P14651 431 aaPredicted RBP16.49■□□□□ 0.23
HLA-DMA-201ENST00000374843 CD1CP29017 333 aa16.49■□□□□ 0.23
HLA-DMA-201ENST00000374843 ALDH4A1P30038 563 aa16.49■□□□□ 0.23
HLA-DMA-201ENST00000374843 DUSP3P51452 185 aaPredicted RBP16.49■□□□□ 0.23
HLA-DMA-201ENST00000374843 RPS13P62277 151 aaKnown RBP16.49■□□□□ 0.23
HLA-DMA-201ENST00000374843 EMX2Q04743 252 aa16.49■□□□□ 0.23
HLA-DMA-201ENST00000374843 DDX39BQ13838 428 aaKnown RBP16.49■□□□□ 0.23
HLA-DMA-201ENST00000374843 ZIC1Q15915 447 aa16.49■□□□□ 0.23
HLA-DMA-201ENST00000374843 CLPPQ16740 277 aaPredicted RBP16.49■□□□□ 0.23
HLA-DMA-201ENST00000374843 TMEM198Q66K66 360 aa16.49■□□□□ 0.23
HLA-DMA-201ENST00000374843 IRGCQ6NXR0 463 aa16.49■□□□□ 0.23
HLA-DMA-201ENST00000374843 TRPM8Q7Z2W7 1104 aa16.49■□□□□ 0.23
HLA-DMA-201ENST00000374843 CLNKQ7Z7G1 428 aa16.49■□□□□ 0.23
HLA-DMA-201ENST00000374843 RNF175Q8N4F7 328 aa16.49■□□□□ 0.23
HLA-DMA-201ENST00000374843 C19orf47Q8N9M1 422 aaKnown RBP16.49■□□□□ 0.23
HLA-DMA-201ENST00000374843 CREB3L4Q8TEY5 395 aa16.49■□□□□ 0.23
HLA-DMA-201ENST00000374843 C11orf24Q96F05 449 aaPredicted RBP16.49■□□□□ 0.23
HLA-DMA-201ENST00000374843 ZDHHC12Q96GR4 267 aa16.49■□□□□ 0.23
HLA-DMA-201ENST00000374843 PPM1MQ96MI6 270 aa16.49■□□□□ 0.23
HLA-DMA-201ENST00000374843 TRAPPC9Q96Q05 1148 aa16.49■□□□□ 0.23
HLA-DMA-201ENST00000374843 SERPINI1Q99574 410 aa16.49■□□□□ 0.23
HLA-DMA-201ENST00000374843 EDEM2Q9BV94 578 aa16.49■□□□□ 0.23
HLA-DMA-201ENST00000374843 SEMA4GQ9NTN9 838 aa16.49■□□□□ 0.23
HLA-DMA-201ENST00000374843 SIRT5Q9NXA8 310 aa16.49■□□□□ 0.23
HLA-DMA-201ENST00000374843 VPS29Q9UBQ0 182 aa16.49■□□□□ 0.23
HLA-DMA-201ENST00000374843 GIMAP2Q9UG22 337 aa16.49■□□□□ 0.23
HLA-DMA-201ENST00000374843 ZFP69BQ9UJL9 534 aa16.49■□□□□ 0.23
HLA-DMA-201ENST00000374843 KLHL20Q9Y2M5 609 aa16.49■□□□□ 0.23
HLA-DMA-201ENST00000374843 TMED5Q9Y3A6 229 aa16.49■□□□□ 0.23
HLA-DMA-201ENST00000374843 AP1M2Q9Y6Q5 423 aa16.49■□□□□ 0.23
HLA-DMA-201ENST00000374843 FEZF1A0PJY2 475 aa16.48■□□□□ 0.23
HLA-DMA-201ENST00000374843 UBDO15205 165 aa16.48■□□□□ 0.23
HLA-DMA-201ENST00000374843 CAPN5O15484 640 aaPredicted RBP16.48■□□□□ 0.23
HLA-DMA-201ENST00000374843 LCMT2O60294 686 aaKnown RBP16.48■□□□□ 0.23
HLA-DMA-201ENST00000374843 CTSVO60911 334 aa16.48■□□□□ 0.23
HLA-DMA-201ENST00000374843 PEX11AO75192 247 aa16.48■□□□□ 0.23
HLA-DMA-201ENST00000374843 ETHE1O95571 254 aa16.48■□□□□ 0.23
HLA-DMA-201ENST00000374843 LMNAP02545 664 aaKnown RBP16.48■□□□□ 0.23
HLA-DMA-201ENST00000374843 PVRP15151 417 aa16.48■□□□□ 0.23
HLA-DMA-201ENST00000374843 ST6GAL1P15907 406 aa16.48■□□□□ 0.23
HLA-DMA-201ENST00000374843 ADSLP30566 484 aaPredicted RBP16.48■□□□□ 0.23
HLA-DMA-201ENST00000374843 GFERP55789 205 aa16.48■□□□□ 0.23
HLA-DMA-201ENST00000374843 CFHR1Q03591 330 aa16.48■□□□□ 0.23
HLA-DMA-201ENST00000374843 TBL3Q12788 808 aaKnown RBP16.48■□□□□ 0.23
HLA-DMA-201ENST00000374843 CUL3Q13618 768 aa16.48■□□□□ 0.23
HLA-DMA-201ENST00000374843 SQLEQ14534 574 aa16.48■□□□□ 0.23
HLA-DMA-201ENST00000374843 KIAA0040Q15053 153 aa16.48■□□□□ 0.23
HLA-DMA-201ENST00000374843 RBBP5Q15291 538 aaKnown RBP16.48■□□□□ 0.23
HLA-DMA-201ENST00000374843 AP5B1Q2VPB7 878 aa16.48■□□□□ 0.23
HLA-DMA-201ENST00000374843 PERM1Q5SV97 790 aa16.48■□□□□ 0.23
HLA-DMA-201ENST00000374843 PRSS42Q7Z5A4 293 aa16.48■□□□□ 0.23
HLA-DMA-201ENST00000374843 VN1R4Q7Z5H5 301 aa16.48■□□□□ 0.23
HLA-DMA-201ENST00000374843 PLXDC1Q8IUK5 500 aa16.48■□□□□ 0.23
HLA-DMA-201ENST00000374843 PLD3Q8IV08 490 aa16.48■□□□□ 0.23
HLA-DMA-201ENST00000374843 PARP9Q8IXQ6 854 aa16.48■□□□□ 0.23
HLA-DMA-201ENST00000374843 FITM2Q8N6M3 262 aa16.48■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 51.2 ms