RNA–Protein interactions for RNA: ENST00000369089.3

PRDM1-201, Transcript of PR/SET domain 1, humanhuman

TSL 1 (best) BASIC

Gene PRDM1, Length 4,675 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM1-201ENST00000369089 ST6GAL2Q96JF0 529 aa10.13□□□□□ -0.79
PRDM1-201ENST00000369089 NIF3L1Q9GZT8 377 aa10.13□□□□□ -0.79
PRDM1-201ENST00000369089 C11orf54Q9H0W9 315 aaPredicted RBP10.13□□□□□ -0.79
PRDM1-201ENST00000369089 NXF3Q9H4D5 531 aaKnown RBP10.13□□□□□ -0.79
PRDM1-201ENST00000369089 ASF1BQ9NVP2 202 aa10.13□□□□□ -0.79
PRDM1-201ENST00000369089 TMEM248Q9NWD8 314 aa10.13□□□□□ -0.79
PRDM1-201ENST00000369089 EXTL2Q9UBQ6 330 aa10.13□□□□□ -0.79
PRDM1-201ENST00000369089 TEX264Q9Y6I9 313 aa10.13□□□□□ -0.79
PRDM1-201ENST00000369089 NCF1BA6NI72 391 aaPredicted RBP10.13□□□□□ -0.79
PRDM1-201ENST00000369089 NCF1CA8MVU1 366 aaPredicted RBP10.13□□□□□ -0.79
PRDM1-201ENST00000369089 TNFRSF11BO00300 401 aa10.13□□□□□ -0.79
PRDM1-201ENST00000369089 DCLK1O15075 740 aa10.13□□□□□ -0.79
PRDM1-201ENST00000369089 SCAMP1O15126 338 aa10.13□□□□□ -0.79
PRDM1-201ENST00000369089 ADAMDEC1O15204 470 aa10.13□□□□□ -0.79
PRDM1-201ENST00000369089 PI15O43692 258 aa10.13□□□□□ -0.79
PRDM1-201ENST00000369089 HMGCRP04035 888 aa10.13□□□□□ -0.79
PRDM1-201ENST00000369089 SLURP2P0DP57 97 aa10.13□□□□□ -0.79
PRDM1-201ENST00000369089 NCF1P14598 390 aaPredicted RBP10.13□□□□□ -0.79
PRDM1-201ENST00000369089 ST3GAL4Q11206 333 aa10.13□□□□□ -0.79
PRDM1-201ENST00000369089 FAM182AQ5T1J6 154 aa10.13□□□□□ -0.79
PRDM1-201ENST00000369089 ZNF529Q6P280 563 aa10.13□□□□□ -0.79
PRDM1-201ENST00000369089 GDPGP1Q6ZNW5 385 aa10.13□□□□□ -0.79
PRDM1-201ENST00000369089 SPRED1Q7Z699 444 aa10.13□□□□□ -0.79
PRDM1-201ENST00000369089 SCARB1Q8WTV0 552 aa10.13□□□□□ -0.79
PRDM1-201ENST00000369089 ZDHHC1Q8WTX9 485 aa10.13□□□□□ -0.79
PRDM1-201ENST00000369089 ZNF606Q8WXB4 792 aa10.13□□□□□ -0.79
PRDM1-201ENST00000369089 DDX1Q92499 740 aaKnown RBP10.13□□□□□ -0.79
PRDM1-201ENST00000369089 TM9SF4Q92544 642 aa10.13□□□□□ -0.79
PRDM1-201ENST00000369089 CD101Q93033 1021 aa10.13□□□□□ -0.79
PRDM1-201ENST00000369089 SLITRK2Q9H156 845 aa10.13□□□□□ -0.79
PRDM1-201ENST00000369089 SMCO4Q9NRQ5 59 aa10.13□□□□□ -0.79
PRDM1-201ENST00000369089 AAR2Q9Y312 384 aaKnown RBP10.13□□□□□ -0.79
PRDM1-201ENST00000369089 DYRK1BQ9Y463 629 aa10.13□□□□□ -0.79
PRDM1-201ENST00000369089 NUBP2Q9Y5Y2 271 aa10.13□□□□□ -0.79
PRDM1-201ENST00000369089 ATRNO75882 1429 aa10.12□□□□□ -0.79
PRDM1-201ENST00000369089 STK25O00506 426 aa10.12□□□□□ -0.79
PRDM1-201ENST00000369089 SUV39H1O43463 412 aa10.12□□□□□ -0.79
PRDM1-201ENST00000369089 RGS9O75916 674 aaPredicted RBP10.12□□□□□ -0.79
PRDM1-201ENST00000369089 FHP07954 510 aa10.12□□□□□ -0.79
PRDM1-201ENST00000369089 FGFR1P11362 822 aa10.12□□□□□ -0.79
PRDM1-201ENST00000369089 CSF2RAP15509 400 aa10.12□□□□□ -0.79
PRDM1-201ENST00000369089 MMP12P39900 470 aa10.12□□□□□ -0.79
PRDM1-201ENST00000369089 PTGR1Q14914 329 aa10.12□□□□□ -0.79
PRDM1-201ENST00000369089 TCEAL1Q15170 157 aa10.12□□□□□ -0.79
PRDM1-201ENST00000369089 AADACL4Q5VUY2 407 aa10.12□□□□□ -0.79
PRDM1-201ENST00000369089 HDDC3Q8N4P3 179 aa10.12□□□□□ -0.79
PRDM1-201ENST00000369089 GLIS1Q8NBF1 620 aa10.12□□□□□ -0.79
PRDM1-201ENST00000369089 DTD1Q8TEA8 209 aa10.12□□□□□ -0.79
PRDM1-201ENST00000369089 SFT2D1Q8WV19 159 aa10.12□□□□□ -0.79
PRDM1-201ENST00000369089 TMEM203Q969S6 136 aa10.12□□□□□ -0.79
PRDM1-201ENST00000369089 MRPL48Q96GC5 212 aaKnown RBP10.12□□□□□ -0.79
PRDM1-201ENST00000369089 OCSTAMPQ9BR26 566 aa10.12□□□□□ -0.79
PRDM1-201ENST00000369089 IGSF5Q9NSI5 407 aa10.12□□□□□ -0.79
PRDM1-201ENST00000369089 ZNF358Q9NW07 568 aa10.12□□□□□ -0.79
PRDM1-201ENST00000369089 UPB1Q9UBR1 384 aa10.12□□□□□ -0.79
PRDM1-201ENST00000369089 RPL36Q9Y3U8 105 aaKnown RBP10.12□□□□□ -0.79
PRDM1-201ENST00000369089 ZNF705GA8MUZ8 300 aaPredicted RBP10.12□□□□□ -0.79
PRDM1-201ENST00000369089 D6RAR5 112 aa10.12□□□□□ -0.79
PRDM1-201ENST00000369089 F5H0A9 414 aaPredicted RBP10.12□□□□□ -0.79
PRDM1-201ENST00000369089 TERTO14746 1132 aaKnown RBP10.12□□□□□ -0.79
PRDM1-201ENST00000369089 GRID2O43424 1007 aa10.12□□□□□ -0.79
PRDM1-201ENST00000369089 FPR1P21462 350 aa10.12□□□□□ -0.79
PRDM1-201ENST00000369089 PTX3P26022 381 aaPredicted RBP10.12□□□□□ -0.79
PRDM1-201ENST00000369089 SCNN1GP51170 649 aa10.12□□□□□ -0.79
PRDM1-201ENST00000369089 ZNF273Q14593 569 aa10.12□□□□□ -0.79
PRDM1-201ENST00000369089 FCN2Q15485 313 aa10.12□□□□□ -0.79
PRDM1-201ENST00000369089 RAET1GQ6H3X3 334 aa10.12□□□□□ -0.79
PRDM1-201ENST00000369089 NCEH1Q6PIU2 408 aa10.12□□□□□ -0.79
PRDM1-201ENST00000369089 WASH2PQ6VEQ5 465 aa10.12□□□□□ -0.79
PRDM1-201ENST00000369089 NLRC3Q7RTR2 1065 aa10.12□□□□□ -0.79
PRDM1-201ENST00000369089 MFSD4AQ8N468 514 aa10.12□□□□□ -0.79
PRDM1-201ENST00000369089 CMASQ8NFW8 434 aaPredicted RBP10.12□□□□□ -0.79
PRDM1-201ENST00000369089 SLC35B2Q8TB61 432 aa10.12□□□□□ -0.79
PRDM1-201ENST00000369089 CD300LFQ8TDQ1 290 aa10.12□□□□□ -0.79
PRDM1-201ENST00000369089 AKT1S1Q96B36 256 aa10.12□□□□□ -0.79
PRDM1-201ENST00000369089 TMEM41AQ96HV5 264 aa10.12□□□□□ -0.79
PRDM1-201ENST00000369089 FCRL1Q96LA6 429 aa10.12□□□□□ -0.79
PRDM1-201ENST00000369089 ACOT13Q9NPJ3 140 aa10.12□□□□□ -0.79
PRDM1-201ENST00000369089 SEMA4BQ9NPR2 832 aaPredicted RBP10.12□□□□□ -0.79
PRDM1-201ENST00000369089 NANSQ9NR45 359 aa10.12□□□□□ -0.79
PRDM1-201ENST00000369089 TMEM45AQ9NWC5 275 aa10.12□□□□□ -0.79
PRDM1-201ENST00000369089 RGPD8O14715 1765 aaPredicted RBP10.12□□□□□ -0.79
PRDM1-201ENST00000369089 GNG14A0A1W2PPG7 69 aa10.12□□□□□ -0.79
PRDM1-201ENST00000369089 PTPN6P29350 595 aa10.12□□□□□ -0.79
PRDM1-201ENST00000369089 ETV6P41212 452 aa10.12□□□□□ -0.79
PRDM1-201ENST00000369089 HCAR3P49019 387 aa10.12□□□□□ -0.79
PRDM1-201ENST00000369089 CXCR4P61073 352 aa10.12□□□□□ -0.79
PRDM1-201ENST00000369089 KLF1Q13351 362 aaPredicted RBP10.12□□□□□ -0.79
PRDM1-201ENST00000369089 AQP6Q13520 282 aa10.12□□□□□ -0.79
PRDM1-201ENST00000369089 AP5B1Q2VPB7 878 aa10.12□□□□□ -0.79
PRDM1-201ENST00000369089 USP39Q53GS9 565 aaKnown RBP10.12□□□□□ -0.79
PRDM1-201ENST00000369089 FKBP1CQ5VVH2 108 aa10.12□□□□□ -0.79
PRDM1-201ENST00000369089 IER5Q5VY09 327 aa10.12□□□□□ -0.79
PRDM1-201ENST00000369089 OR2T5Q6IEZ7 315 aa10.12□□□□□ -0.79
PRDM1-201ENST00000369089 SLC25A25Q6KCM7 469 aa10.12□□□□□ -0.79
PRDM1-201ENST00000369089 OR6J1Q8NGC5 347 aa10.12□□□□□ -0.79
PRDM1-201ENST00000369089 OR2T29Q8NH02 315 aa10.12□□□□□ -0.79
PRDM1-201ENST00000369089 OR10A6Q8NH74 314 aa10.12□□□□□ -0.79
PRDM1-201ENST00000369089 TWIST2Q8WVJ9 160 aa10.12□□□□□ -0.79
PRDM1-201ENST00000369089 COPS5Q92905 334 aa10.12□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms