RNA–Protein interactions for RNA: ENST00000368690.7

CHTOP-203, Transcript of chromatin target of PRMT1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CHTOP, Length 2,165 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHTOP-203ENST00000368690 PADI2Q9Y2J8 665 aa16.85■□□□□ 0.29
CHTOP-203ENST00000368690 CTDSP2O14595 271 aa16.85■□□□□ 0.29
CHTOP-203ENST00000368690 INSIG1O15503 277 aa16.85■□□□□ 0.29
CHTOP-203ENST00000368690 CR2P20023 1033 aa16.85■□□□□ 0.29
CHTOP-203ENST00000368690 HOXD11P31277 338 aaPredicted RBP16.85■□□□□ 0.29
CHTOP-203ENST00000368690 ALDH9A1P49189 494 aa16.85■□□□□ 0.29
CHTOP-203ENST00000368690 PCDH1Q08174 1060 aa16.85■□□□□ 0.29
CHTOP-203ENST00000368690 SLC14A1Q13336 389 aa16.85■□□□□ 0.29
CHTOP-203ENST00000368690 DUOXA1Q1HG43 343 aa16.85■□□□□ 0.29
CHTOP-203ENST00000368690 SNAP47Q5SQN1 464 aa16.85■□□□□ 0.29
CHTOP-203ENST00000368690 OR4F3Q6IEY1 312 aa16.85■□□□□ 0.29
CHTOP-203ENST00000368690 NEK5Q6P3R8 708 aa16.85■□□□□ 0.29
CHTOP-203ENST00000368690 RTN4RL1Q86UN2 441 aaPredicted RBP16.85■□□□□ 0.29
CHTOP-203ENST00000368690 ATCAYQ86WG3 371 aa16.85■□□□□ 0.29
CHTOP-203ENST00000368690 PTOV1Q86YD1 416 aa16.85■□□□□ 0.29
CHTOP-203ENST00000368690 DBF4BQ8NFT6 615 aa16.85■□□□□ 0.29
CHTOP-203ENST00000368690 CLHC1Q8NHS4 586 aa16.85■□□□□ 0.29
CHTOP-203ENST00000368690 HCAR2Q8TDS4 363 aa16.85■□□□□ 0.29
CHTOP-203ENST00000368690 NEDD4LQ96PU5 975 aa16.85■□□□□ 0.29
CHTOP-203ENST00000368690 ZBED2Q9BTP6 218 aa16.85■□□□□ 0.29
CHTOP-203ENST00000368690 RETREG1Q9H6L5 497 aa16.85■□□□□ 0.29
CHTOP-203ENST00000368690 ACOXLQ9NUZ1 547 aa16.85■□□□□ 0.29
CHTOP-203ENST00000368690 EFCAB10A6NFE3 127 aa16.84■□□□□ 0.29
CHTOP-203ENST00000368690 CLIC1O00299 241 aa16.84■□□□□ 0.29
CHTOP-203ENST00000368690 CCRL2O00421 344 aa16.84■□□□□ 0.29
CHTOP-203ENST00000368690 PITPNM1O00562 1244 aa16.84■□□□□ 0.29
CHTOP-203ENST00000368690 AP3D1O14617 1153 aa16.84■□□□□ 0.29
CHTOP-203ENST00000368690 STX7O15400 261 aaKnown RBP16.84■□□□□ 0.29
CHTOP-203ENST00000368690 B3GAT3O94766 335 aa16.84■□□□□ 0.29
CHTOP-203ENST00000368690 CRYZL1O95825 349 aa16.84■□□□□ 0.29
CHTOP-203ENST00000368690 IL7P13232 177 aa16.84■□□□□ 0.29
CHTOP-203ENST00000368690 TYMPP19971 482 aa16.84■□□□□ 0.29
CHTOP-203ENST00000368690 TLE2Q04725 743 aa16.84■□□□□ 0.29
CHTOP-203ENST00000368690 ST3GAL4Q11206 333 aa16.84■□□□□ 0.29
CHTOP-203ENST00000368690 SYCE2Q6PIF2 218 aa16.84■□□□□ 0.29
CHTOP-203ENST00000368690 CD300LGQ6UXG3 332 aa16.84■□□□□ 0.29
CHTOP-203ENST00000368690 CERS6Q6ZMG9 384 aa16.84■□□□□ 0.29
CHTOP-203ENST00000368690 GDPGP1Q6ZNW5 385 aa16.84■□□□□ 0.29
CHTOP-203ENST00000368690 FAM124AQ86V42 546 aa16.84■□□□□ 0.29
CHTOP-203ENST00000368690 HASPINQ8TF76 798 aa16.84■□□□□ 0.29
CHTOP-203ENST00000368690 LINC01599Q8WXQ3 324 aa16.84■□□□□ 0.29
CHTOP-203ENST00000368690 KCNC2Q96PR1 638 aa16.84■□□□□ 0.29
CHTOP-203ENST00000368690 MCCC1Q96RQ3 725 aaPredicted RBP16.84■□□□□ 0.29
CHTOP-203ENST00000368690 ACPTQ9BZG2 426 aa16.84■□□□□ 0.29
CHTOP-203ENST00000368690 MAGEH1Q9H213 219 aa16.84■□□□□ 0.29
CHTOP-203ENST00000368690 DIABLOQ9NR28 239 aa16.84■□□□□ 0.29
CHTOP-203ENST00000368690 GPR83Q9NYM4 423 aa16.84■□□□□ 0.29
CHTOP-203ENST00000368690 WWOXQ9NZC7 414 aa16.84■□□□□ 0.29
CHTOP-203ENST00000368690 PPT2Q9UMR5 302 aa16.84■□□□□ 0.29
CHTOP-203ENST00000368690 POFUT2Q9Y2G5 429 aa16.84■□□□□ 0.29
CHTOP-203ENST00000368690 DLGAP4Q9Y2H0 992 aa16.84■□□□□ 0.29
CHTOP-203ENST00000368690 KRT87PA6NCN2 255 aa16.84■□□□□ 0.29
CHTOP-203ENST00000368690 LOC730098B7Z3J9 87 aa16.84■□□□□ 0.29
CHTOP-203ENST00000368690 IGLV3-27P01718 113 aa16.84■□□□□ 0.29
CHTOP-203ENST00000368690 ANXA8P13928 327 aa16.84■□□□□ 0.29
CHTOP-203ENST00000368690 EPB42P16452 691 aa16.84■□□□□ 0.29
CHTOP-203ENST00000368690 RPS3P23396 243 aaKnown RBP eCLIP16.84■□□□□ 0.292e-6■■□□□ 11.8
CHTOP-203ENST00000368690 HOXD9P28356 352 aaPredicted RBP16.84■□□□□ 0.29
CHTOP-203ENST00000368690 MLLT3P42568 568 aaPredicted RBP16.84■□□□□ 0.29
CHTOP-203ENST00000368690 BRCC3P46736 316 aa16.84■□□□□ 0.29
CHTOP-203ENST00000368690 CACNG1Q06432 222 aa16.84■□□□□ 0.29
CHTOP-203ENST00000368690 ASAH1Q13510 395 aa16.84■□□□□ 0.29
CHTOP-203ENST00000368690 GLB1LQ6UWU2 654 aa16.84■□□□□ 0.29
CHTOP-203ENST00000368690 DEFB128Q7Z7B8 93 aa16.84■□□□□ 0.29
CHTOP-203ENST00000368690 ANKRD46Q86W74 232 aa16.84■□□□□ 0.29
CHTOP-203ENST00000368690 FAM181AQ8N9Y4 354 aa16.84■□□□□ 0.29
CHTOP-203ENST00000368690 SUN5Q8TC36 379 aa16.84■□□□□ 0.29
CHTOP-203ENST00000368690 ULK4Q96C45 1275 aa16.84■□□□□ 0.29
CHTOP-203ENST00000368690 CINPQ9BW66 212 aaPredicted RBP16.84■□□□□ 0.29
CHTOP-203ENST00000368690 TAPBPLQ9BX59 468 aa16.84■□□□□ 0.29
CHTOP-203ENST00000368690 RDH14Q9HBH5 336 aa16.84■□□□□ 0.29
CHTOP-203ENST00000368690 ZNF226Q9NYT6 803 aa16.84■□□□□ 0.29
CHTOP-203ENST00000368690 GPRC5BQ9NZH0 403 aa16.84■□□□□ 0.29
CHTOP-203ENST00000368690 PCDHGA2Q9Y5H1 932 aa16.84■□□□□ 0.29
CHTOP-203ENST00000368690 V9GYH0 126 aa16.84■□□□□ 0.29
CHTOP-203ENST00000368690 KIAA0100Q14667 2235 aaKnown RBP16.83■□□□□ 0.29
CHTOP-203ENST00000368690 SH3D21A4FU49 640 aa16.83■□□□□ 0.28
CHTOP-203ENST00000368690 ADAMDEC1O15204 470 aa16.83■□□□□ 0.28
CHTOP-203ENST00000368690 EPN2O95208 641 aa16.83■□□□□ 0.28
CHTOP-203ENST00000368690 MNX1P50219 401 aaPredicted RBP16.83■□□□□ 0.28
CHTOP-203ENST00000368690 KCNJ10P78508 379 aa16.83■□□□□ 0.28
CHTOP-203ENST00000368690 SLC39A12Q504Y0 691 aa16.83■□□□□ 0.28
CHTOP-203ENST00000368690 GPAT3Q53EU6 434 aa16.83■□□□□ 0.28
CHTOP-203ENST00000368690 C11orf74Q86VG3 221 aa16.83■□□□□ 0.28
CHTOP-203ENST00000368690 CACTIN-AS1Q8N1I8 211 aa16.83■□□□□ 0.28
CHTOP-203ENST00000368690 CMTM7Q96FZ5 175 aa16.83■□□□□ 0.28
CHTOP-203ENST00000368690 TRAF4Q9BUZ4 470 aaPredicted RBP16.83■□□□□ 0.28
CHTOP-203ENST00000368690 SLC22A4Q9H015 551 aa16.83■□□□□ 0.28
CHTOP-203ENST00000368690 CRISPLD2Q9H0B8 497 aa16.83■□□□□ 0.28
CHTOP-203ENST00000368690 RACGAP1Q9H0H5 632 aa16.83■□□□□ 0.28
CHTOP-203ENST00000368690 RPRD1BQ9NQG5 326 aaKnown RBP16.83■□□□□ 0.28
CHTOP-203ENST00000368690 PRDM8Q9NQV8 689 aa16.83■□□□□ 0.28
CHTOP-203ENST00000368690 SATB2Q9UPW6 733 aa16.83■□□□□ 0.28
CHTOP-203ENST00000368690 TMA7Q9Y2S6 64 aaKnown RBP16.83■□□□□ 0.28
CHTOP-203ENST00000368690 TTC3P53804 2025 aa16.83■□□□□ 0.28
CHTOP-203ENST00000368690 IQCF5A8MTL0 148 aa16.82■□□□□ 0.28
CHTOP-203ENST00000368690 GFRA2O00451 464 aa16.82■□□□□ 0.28
CHTOP-203ENST00000368690 SEC14L5O43304 696 aa16.82■□□□□ 0.28
CHTOP-203ENST00000368690 PRMT3O60678 531 aa16.82■□□□□ 0.28
CHTOP-203ENST00000368690 ALPPP05187 535 aa16.82■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 101.8 ms