RNA–Protein interactions for RNA: ENST00000368292.10

ECHDC1-204, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 5

Gene ECHDC1, Length 854 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-204ENST00000368292 KLHL7Q8IXQ5 586 aa4.92□□□□□ -1.62
ECHDC1-204ENST00000368292 CADM3Q8N126 398 aa4.92□□□□□ -1.62
ECHDC1-204ENST00000368292 STEAP2Q8NFT2 490 aa4.92□□□□□ -1.62
ECHDC1-204ENST00000368292 OR52E1Q8NGJ3 308 aa4.92□□□□□ -1.62
ECHDC1-204ENST00000368292 MBD3L2Q8NHZ7 208 aaPredicted RBP4.92□□□□□ -1.62
ECHDC1-204ENST00000368292 TEX47Q8TBZ9 253 aa4.92□□□□□ -1.62
ECHDC1-204ENST00000368292 PAQR8Q8TEZ7 354 aa4.92□□□□□ -1.62
ECHDC1-204ENST00000368292 DYDC1Q8WWB3 177 aa4.92□□□□□ -1.62
ECHDC1-204ENST00000368292 ATG4AQ8WYN0 398 aa4.92□□□□□ -1.62
ECHDC1-204ENST00000368292 TMEM186Q96B77 213 aa4.92□□□□□ -1.62
ECHDC1-204ENST00000368292 GRAMD1AQ96CP6 724 aa4.92□□□□□ -1.62
ECHDC1-204ENST00000368292 TMA16Q96EY4 203 aaKnown RBP4.92□□□□□ -1.62
ECHDC1-204ENST00000368292 PERPQ96FX8 193 aa4.92□□□□□ -1.62
ECHDC1-204ENST00000368292 MED30Q96HR3 178 aa4.92□□□□□ -1.62
ECHDC1-204ENST00000368292 ELMO2Q96JJ3 720 aa4.92□□□□□ -1.62
ECHDC1-204ENST00000368292 KCNS3Q9BQ31 491 aa4.92□□□□□ -1.62
ECHDC1-204ENST00000368292 TDRD1Q9BXT4 1180 aaKnown RBP4.92□□□□□ -1.62
ECHDC1-204ENST00000368292 POMKQ9H5K3 350 aa4.92□□□□□ -1.62
ECHDC1-204ENST00000368292 POLR1BQ9H9Y6 1135 aa4.92□□□□□ -1.62
ECHDC1-204ENST00000368292 PDGFCQ9NRA1 345 aa4.92□□□□□ -1.62
ECHDC1-204ENST00000368292 FAM212BQ9NTI7 297 aaPredicted RBP4.92□□□□□ -1.62
ECHDC1-204ENST00000368292 ZDHHC7Q9NXF8 308 aa4.92□□□□□ -1.62
ECHDC1-204ENST00000368292 SH3BP4Q9P0V3 963 aa4.92□□□□□ -1.62
ECHDC1-204ENST00000368292 TESQ9UGI8 421 aaKnown RBP4.92□□□□□ -1.62
ECHDC1-204ENST00000368292 SLC7A8Q9UHI5 535 aa4.92□□□□□ -1.62
ECHDC1-204ENST00000368292 OSGIN1Q9UJX0 560 aa4.92□□□□□ -1.62
ECHDC1-204ENST00000368292 ANAPC2Q9UJX6 822 aa4.92□□□□□ -1.62
ECHDC1-204ENST00000368292 TSPAN16Q9UKR8 245 aa4.92□□□□□ -1.62
ECHDC1-204ENST00000368292 VANGL2Q9ULK5 521 aa4.92□□□□□ -1.62
ECHDC1-204ENST00000368292 DAPP1Q9UN19 280 aa4.92□□□□□ -1.62
ECHDC1-204ENST00000368292 ERVK-11Q9UQG0 969 aa4.92□□□□□ -1.62
ECHDC1-204ENST00000368292 HBS1LQ9Y450 684 aaKnown RBP4.92□□□□□ -1.62
ECHDC1-204ENST00000368292 RIPK3Q9Y572 518 aa4.92□□□□□ -1.62
ECHDC1-204ENST00000368292 AP4B1Q9Y6B7 739 aa4.92□□□□□ -1.62
ECHDC1-204ENST00000368292 KCNE2Q9Y6J6 123 aa4.92□□□□□ -1.62
ECHDC1-204ENST00000368292 KDM3AQ9Y4C1 1321 aa4.92□□□□□ -1.62
ECHDC1-204ENST00000368292 KALRNO60229 2985 aa4.92□□□□□ -1.62
ECHDC1-204ENST00000368292 MYH1P12882 1939 aa4.91□□□□□ -1.62
ECHDC1-204ENST00000368292 MIA3Q5JRA6 1907 aa4.91□□□□□ -1.62
ECHDC1-204ENST00000368292 TRGV11A0A075B6L2 103 aa4.91□□□□□ -1.62
ECHDC1-204ENST00000368292 GOLGA8QA0A0J9YX86 632 aa4.91□□□□□ -1.62
ECHDC1-204ENST00000368292 LOC105371267A0A1B0GV96 52 aa4.91□□□□□ -1.62
ECHDC1-204ENST00000368292 CCDC162PA2VCL2 907 aa4.91□□□□□ -1.62
ECHDC1-204ENST00000368292 F8WDY8 70 aa4.91□□□□□ -1.62
ECHDC1-204ENST00000368292 PSMD11O00231 422 aa4.91□□□□□ -1.62
ECHDC1-204ENST00000368292 STX16O14662 325 aa4.91□□□□□ -1.62
ECHDC1-204ENST00000368292 ZNF197O14709 1029 aa4.91□□□□□ -1.62
ECHDC1-204ENST00000368292 XPO1O14980 1071 aaKnown RBP4.91□□□□□ -1.62
ECHDC1-204ENST00000368292 SMAD9O15198 467 aaKnown RBP4.91□□□□□ -1.62
ECHDC1-204ENST00000368292 PPM1DO15297 605 aa4.91□□□□□ -1.62
ECHDC1-204ENST00000368292 TGFB1I1O43294 461 aa4.91□□□□□ -1.62
ECHDC1-204ENST00000368292 ATP8B1O43520 1251 aa4.91□□□□□ -1.62
ECHDC1-204ENST00000368292 HCRTR2O43614 444 aa4.91□□□□□ -1.62
ECHDC1-204ENST00000368292 TLX2O43763 284 aaPredicted RBP4.91□□□□□ -1.62
ECHDC1-204ENST00000368292 MED24O75448 989 aa4.91□□□□□ -1.62
ECHDC1-204ENST00000368292 ECI2O75521 394 aa4.91□□□□□ -1.62
ECHDC1-204ENST00000368292 SCGB2A1O75556 95 aa4.91□□□□□ -1.62
ECHDC1-204ENST00000368292 RPP40O75818 363 aaKnown RBP4.91□□□□□ -1.62
ECHDC1-204ENST00000368292 AKAP3O75969 853 aa4.91□□□□□ -1.62
ECHDC1-204ENST00000368292 CLPXO76031 633 aa4.91□□□□□ -1.62
ECHDC1-204ENST00000368292 RHOBTB1O94844 696 aa4.91□□□□□ -1.62
ECHDC1-204ENST00000368292 SIX3O95343 332 aaPredicted RBP4.91□□□□□ -1.62
ECHDC1-204ENST00000368292 TGM6O95932 706 aa4.91□□□□□ -1.62
ECHDC1-204ENST00000368292 CH25HO95992 272 aa4.91□□□□□ -1.62
ECHDC1-204ENST00000368292 PENKP01210 267 aaPredicted RBP4.91□□□□□ -1.62
ECHDC1-204ENST00000368292 CRYGCP07315 174 aa4.91□□□□□ -1.62
ECHDC1-204ENST00000368292 YES1P07947 543 aa4.91□□□□□ -1.62
ECHDC1-204ENST00000368292 CLTAP09496 248 aa4.91□□□□□ -1.62
ECHDC1-204ENST00000368292 PNMA6AP0CW24 399 aaPredicted RBP4.91□□□□□ -1.62
ECHDC1-204ENST00000368292 CPA1P15085 419 aa4.91□□□□□ -1.62
ECHDC1-204ENST00000368292 CTRB1P17538 263 aa4.91□□□□□ -1.62
ECHDC1-204ENST00000368292 PSMA2P25787 234 aa4.91□□□□□ -1.62
ECHDC1-204ENST00000368292 ALDH3B1P43353 468 aa4.91□□□□□ -1.62
ECHDC1-204ENST00000368292 AVPR1BP47901 424 aa4.91□□□□□ -1.62
ECHDC1-204ENST00000368292 LEPRP48357 1165 aaKnown RBP4.91□□□□□ -1.62
ECHDC1-204ENST00000368292 SMSP52788 366 aa4.91□□□□□ -1.62
ECHDC1-204ENST00000368292 THOP1P52888 689 aa4.91□□□□□ -1.62
ECHDC1-204ENST00000368292 CDH8P55286 799 aa4.91□□□□□ -1.62
ECHDC1-204ENST00000368292 XIAPP98170 497 aa4.91□□□□□ -1.62
ECHDC1-204ENST00000368292 GCNT1Q02742 428 aa4.91□□□□□ -1.62
ECHDC1-204ENST00000368292 FADDQ13158 208 aa4.91□□□□□ -1.62
ECHDC1-204ENST00000368292 SNTB2Q13425 540 aaKnown RBP4.91□□□□□ -1.62
ECHDC1-204ENST00000368292 IL18Q14116 193 aa4.91□□□□□ -1.62
ECHDC1-204ENST00000368292 SPCS2Q15005 226 aa4.91□□□□□ -1.62
ECHDC1-204ENST00000368292 LARS2Q15031 903 aaKnown RBP4.91□□□□□ -1.62
ECHDC1-204ENST00000368292 DECR1Q16698 335 aa4.91□□□□□ -1.62
ECHDC1-204ENST00000368292 KLHL40Q2TBA0 621 aa4.91□□□□□ -1.62
ECHDC1-204ENST00000368292 BTBD16Q32M84 506 aa4.91□□□□□ -1.62
ECHDC1-204ENST00000368292 ZNF829Q3KNS6 432 aaPredicted RBP4.91□□□□□ -1.62
ECHDC1-204ENST00000368292 KRTAP15-1Q3LI76 137 aa4.91□□□□□ -1.62
ECHDC1-204ENST00000368292 PIP5KL1Q5T9C9 394 aa4.91□□□□□ -1.62
ECHDC1-204ENST00000368292 ARMC12Q5T9G4 340 aa4.91□□□□□ -1.62
ECHDC1-204ENST00000368292 PLA2G4FQ68DD2 849 aa4.91□□□□□ -1.62
ECHDC1-204ENST00000368292 CTRB2Q6GPI1 263 aa4.91□□□□□ -1.62
ECHDC1-204ENST00000368292 RAET1GQ6H3X3 334 aa4.91□□□□□ -1.62
ECHDC1-204ENST00000368292 NCAPH2Q6IBW4 605 aa4.91□□□□□ -1.62
ECHDC1-204ENST00000368292 RINT1Q6NUQ1 792 aa4.91□□□□□ -1.62
ECHDC1-204ENST00000368292 PMF1Q6P1K2 205 aa4.91□□□□□ -1.62
ECHDC1-204ENST00000368292 MOXD1Q6UVY6 613 aa4.91□□□□□ -1.62
ECHDC1-204ENST00000368292 CLEC9AQ6UXN8 241 aa4.91□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms