RNA–Protein interactions for RNA: ENST00000357235.5

CDC42SE1-201, Transcript of CDC42 small effector 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC42SE1, Length 3,045 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1-201ENST00000357235 CHCHD6Q9BRQ6 235 aa7.99□□□□□ -1.13
CDC42SE1-201ENST00000357235 COPS4Q9BT78 406 aa7.99□□□□□ -1.13
CDC42SE1-201ENST00000357235 FAM126AQ9BYI3 521 aaPredicted RBP7.99□□□□□ -1.13
CDC42SE1-201ENST00000357235 ELOVL6Q9H5J4 265 aa7.99□□□□□ -1.13
CDC42SE1-201ENST00000357235 ASB8Q9H765 288 aa7.99□□□□□ -1.13
CDC42SE1-201ENST00000357235 ZNF556Q9HAH1 456 aa7.99□□□□□ -1.13
CDC42SE1-201ENST00000357235 TRMT13Q9NUP7 481 aaKnown RBP7.99□□□□□ -1.13
CDC42SE1-201ENST00000357235 PCDHB5Q9Y5E4 795 aa7.99□□□□□ -1.13
CDC42SE1-201ENST00000357235 BRCA1P38398 1863 aaKnown RBP7.99□□□□□ -1.13
CDC42SE1-201ENST00000357235 HMX3A6NHT5 357 aa7.98□□□□□ -1.13
CDC42SE1-201ENST00000357235 TOR1AO14656 332 aa7.98□□□□□ -1.13
CDC42SE1-201ENST00000357235 PLD2O14939 933 aa7.98□□□□□ -1.13
CDC42SE1-201ENST00000357235 KLK8O60259 260 aa7.98□□□□□ -1.13
CDC42SE1-201ENST00000357235 CYP7B1O75881 506 aa7.98□□□□□ -1.13
CDC42SE1-201ENST00000357235 MED26O95402 600 aa7.98□□□□□ -1.13
CDC42SE1-201ENST00000357235 ESR1P03372 595 aa7.98□□□□□ -1.13
CDC42SE1-201ENST00000357235 ZNF865P0CJ78 1059 aaPredicted RBP7.98□□□□□ -1.13
CDC42SE1-201ENST00000357235 RPL17P18621 184 aaKnown RBP7.98□□□□□ -1.13
CDC42SE1-201ENST00000357235 EVI2BP34910 448 aa7.98□□□□□ -1.13
CDC42SE1-201ENST00000357235 RYKP34925 604 aa7.98□□□□□ -1.13
CDC42SE1-201ENST00000357235 LIPAP38571 399 aa7.98□□□□□ -1.13
CDC42SE1-201ENST00000357235 RGS4P49798 205 aa7.98□□□□□ -1.13
CDC42SE1-201ENST00000357235 CLCN7P51798 805 aa7.98□□□□□ -1.13
CDC42SE1-201ENST00000357235 RPS14P62263 151 aaKnown RBP7.98□□□□□ -1.13
CDC42SE1-201ENST00000357235 RPP38P78345 283 aaKnown RBP7.98□□□□□ -1.13
CDC42SE1-201ENST00000357235 VLDLRP98155 873 aa7.98□□□□□ -1.13
CDC42SE1-201ENST00000357235 MVKQ03426 396 aa7.98□□□□□ -1.13
CDC42SE1-201ENST00000357235 MADCAM1Q13477 382 aa7.98□□□□□ -1.13
CDC42SE1-201ENST00000357235 ZNF267Q14586 743 aaPredicted RBP7.98□□□□□ -1.13
CDC42SE1-201ENST00000357235 ACOX1Q15067 660 aa7.98□□□□□ -1.13
CDC42SE1-201ENST00000357235 SF1Q15637 639 aaKnown RBP7.98□□□□□ -1.13
CDC42SE1-201ENST00000357235 FAM171A1Q5VUB5 890 aa7.98□□□□□ -1.13
CDC42SE1-201ENST00000357235 PRSS48Q7RTY5 328 aa7.98□□□□□ -1.13
CDC42SE1-201ENST00000357235 VN1R5Q7Z5H4 357 aa7.98□□□□□ -1.13
CDC42SE1-201ENST00000357235 NLGN4XQ8N0W4 816 aa7.98□□□□□ -1.13
CDC42SE1-201ENST00000357235 ST13P5Q8NFI4 369 aaPredicted RBP7.98□□□□□ -1.13
CDC42SE1-201ENST00000357235 LKAAEAR1Q8TD35 194 aa7.98□□□□□ -1.13
CDC42SE1-201ENST00000357235 BCL7CQ8WUZ0 217 aaPredicted RBP7.98□□□□□ -1.13
CDC42SE1-201ENST00000357235 DEDD2Q8WXF8 326 aa7.98□□□□□ -1.13
CDC42SE1-201ENST00000357235 FAM193BQ96PV7 902 aaPredicted RBP7.98□□□□□ -1.13
CDC42SE1-201ENST00000357235 FYTTD1Q96QD9 318 aaKnown RBP7.98□□□□□ -1.13
CDC42SE1-201ENST00000357235 ZNF300Q96RE9 604 aaPredicted RBP7.98□□□□□ -1.13
CDC42SE1-201ENST00000357235 BTBD2Q9BX70 525 aa7.98□□□□□ -1.13
CDC42SE1-201ENST00000357235 C1QTNF3Q9BXJ4 246 aa7.98□□□□□ -1.13
CDC42SE1-201ENST00000357235 REEP1Q9H902 201 aa7.98□□□□□ -1.13
CDC42SE1-201ENST00000357235 RANGRFQ9HD47 186 aaPredicted RBP7.98□□□□□ -1.13
CDC42SE1-201ENST00000357235 FNIP2Q9P278 1114 aa7.98□□□□□ -1.13
CDC42SE1-201ENST00000357235 SNX7Q9UNH6 387 aa7.98□□□□□ -1.13
CDC42SE1-201ENST00000357235 PABPN1LA6NDY0 278 aaKnown RBP7.98□□□□□ -1.13
CDC42SE1-201ENST00000357235 I3L521 148 aa7.98□□□□□ -1.13
CDC42SE1-201ENST00000357235 SLC16A6O15403 523 aa7.98□□□□□ -1.13
CDC42SE1-201ENST00000357235 TAPBPO15533 448 aa7.98□□□□□ -1.13
CDC42SE1-201ENST00000357235 RGS5O15539 181 aa7.98□□□□□ -1.13
CDC42SE1-201ENST00000357235 NDUFA2O43678 99 aa7.98□□□□□ -1.13
CDC42SE1-201ENST00000357235 SSX4O60224 188 aa7.98□□□□□ -1.13
CDC42SE1-201ENST00000357235 GADD45AP24522 165 aa7.98□□□□□ -1.13
CDC42SE1-201ENST00000357235 ERP29P30040 261 aaKnown RBP7.98□□□□□ -1.13
CDC42SE1-201ENST00000357235 GKP32189 559 aa7.98□□□□□ -1.13
CDC42SE1-201ENST00000357235 PTGER3P43115 390 aa7.98□□□□□ -1.13
CDC42SE1-201ENST00000357235 DAB2P98082 770 aa7.98□□□□□ -1.13
CDC42SE1-201ENST00000357235 DBPQ10586 325 aaPredicted RBP7.98□□□□□ -1.13
CDC42SE1-201ENST00000357235 DUSP4Q13115 394 aa7.98□□□□□ -1.13
CDC42SE1-201ENST00000357235 MAD2L1Q13257 205 aaPredicted RBP7.98□□□□□ -1.13
CDC42SE1-201ENST00000357235 GBX1Q14549 363 aa7.98□□□□□ -1.13
CDC42SE1-201ENST00000357235 KIAA0040Q15053 153 aa7.98□□□□□ -1.13
CDC42SE1-201ENST00000357235 TPRG1LQ5T0D9 272 aa7.98□□□□□ -1.13
CDC42SE1-201ENST00000357235 ARMC12Q5T9G4 340 aa7.98□□□□□ -1.13
CDC42SE1-201ENST00000357235 SERPINA9Q86WD7 417 aa7.98□□□□□ -1.13
CDC42SE1-201ENST00000357235 ZFAND1Q8TCF1 268 aa7.98□□□□□ -1.13
CDC42SE1-201ENST00000357235 GTF3C2Q8WUA4 911 aaPredicted RBP7.98□□□□□ -1.13
CDC42SE1-201ENST00000357235 TADA1Q96BN2 335 aa7.98□□□□□ -1.13
CDC42SE1-201ENST00000357235 MGME1Q9BQP7 344 aa7.98□□□□□ -1.13
CDC42SE1-201ENST00000357235 GKN1Q9NS71 199 aa7.98□□□□□ -1.13
CDC42SE1-201ENST00000357235 C14orf119Q9NWQ9 140 aa7.98□□□□□ -1.13
CDC42SE1-201ENST00000357235 ARL15Q9NXU5 204 aa7.98□□□□□ -1.13
CDC42SE1-201ENST00000357235 EHD3Q9NZN3 535 aa7.98□□□□□ -1.13
CDC42SE1-201ENST00000357235 EIF3KQ9UBQ5 218 aaKnown RBP7.98□□□□□ -1.13
CDC42SE1-201ENST00000357235 DOCK3Q8IZD9 2030 aa7.98□□□□□ -1.13
CDC42SE1-201ENST00000357235 PRRC2BQ5JSZ5 2229 aaKnown RBP7.98□□□□□ -1.13
CDC42SE1-201ENST00000357235 IGLV3-10A0A075B6K4 115 aa7.97□□□□□ -1.13
CDC42SE1-201ENST00000357235 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP7.97□□□□□ -1.13
CDC42SE1-201ENST00000357235 A0A0U1RQF3 1178 aa7.97□□□□□ -1.13
CDC42SE1-201ENST00000357235 OR6C70A6NIJ9 312 aa7.97□□□□□ -1.13
CDC42SE1-201ENST00000357235 NT5C1B-RDH14C9J2C7 533 aa7.97□□□□□ -1.13
CDC42SE1-201ENST00000357235 IFRD1O00458 451 aaPredicted RBP7.97□□□□□ -1.13
CDC42SE1-201ENST00000357235 PCDHGA12O60330 932 aa7.97□□□□□ -1.13
CDC42SE1-201ENST00000357235 FABP3P05413 133 aa7.97□□□□□ -1.13
CDC42SE1-201ENST00000357235 RETP07949 1114 aa7.97□□□□□ -1.13
CDC42SE1-201ENST00000357235 CYP2A6P11509 494 aaPredicted RBP7.97□□□□□ -1.13
CDC42SE1-201ENST00000357235 POU2F1P14859 743 aa7.97□□□□□ -1.13
CDC42SE1-201ENST00000357235 TNFRSF1BP20333 461 aa7.97□□□□□ -1.13
CDC42SE1-201ENST00000357235 DDCP20711 480 aa7.97□□□□□ -1.13
CDC42SE1-201ENST00000357235 PRIM2P49643 509 aa7.97□□□□□ -1.13
CDC42SE1-201ENST00000357235 SGSHP51688 502 aa7.97□□□□□ -1.13
CDC42SE1-201ENST00000357235 ZNF177Q13360 481 aaPredicted RBP7.97□□□□□ -1.13
CDC42SE1-201ENST00000357235 DMC1Q14565 340 aa7.97□□□□□ -1.13
CDC42SE1-201ENST00000357235 TIGD6Q17RP2 521 aa7.97□□□□□ -1.13
CDC42SE1-201ENST00000357235 PLEKHG6Q3KR16 790 aa7.97□□□□□ -1.13
CDC42SE1-201ENST00000357235 CYP27C1Q4G0S4 372 aa7.97□□□□□ -1.13
CDC42SE1-201ENST00000357235 PRSS36Q5K4E3 855 aa7.97□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms