RNA–Protein interactions for RNA: ENST00000357085.4

TRIM38-201, Transcript of tripartite motif containing 38, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM38, Length 9,413 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM38-201ENST00000357085 SIAH1Q8IUQ4 282 aa6.39□□□□□ -1.39
TRIM38-201ENST00000357085 LILRB1Q8NHL6 650 aaPredicted RBP6.39□□□□□ -1.39
TRIM38-201ENST00000357085 SHKBP1Q8TBC3 707 aa6.39□□□□□ -1.39
TRIM38-201ENST00000357085 BPIFB1Q8TDL5 484 aa6.39□□□□□ -1.39
TRIM38-201ENST00000357085 CLP1Q92989 425 aaKnown RBP6.39□□□□□ -1.39
TRIM38-201ENST00000357085 TMEM125Q96AQ2 219 aa6.39□□□□□ -1.39
TRIM38-201ENST00000357085 ISYNA1Q9NPH2 558 aa6.39□□□□□ -1.39
TRIM38-201ENST00000357085 MIEF1Q9NQG6 463 aa6.39□□□□□ -1.39
TRIM38-201ENST00000357085 SNAPINO95295 136 aa6.38□□□□□ -1.39
TRIM38-201ENST00000357085 GBX2P52951 348 aaPredicted RBP6.38□□□□□ -1.39
TRIM38-201ENST00000357085 WNT3AP56704 352 aa6.38□□□□□ -1.39
TRIM38-201ENST00000357085 BTN1A1Q13410 526 aa6.38□□□□□ -1.39
TRIM38-201ENST00000357085 ANKRD54Q6NXT1 300 aa6.38□□□□□ -1.39
TRIM38-201ENST00000357085 INO80EQ8NBZ0 244 aaPredicted RBP6.38□□□□□ -1.39
TRIM38-201ENST00000357085 RPLP0P6Q8NHW5 317 aa6.38□□□□□ -1.39
TRIM38-201ENST00000357085 ADAMTS14Q8WXS8 1223 aa6.38□□□□□ -1.39
TRIM38-201ENST00000357085 CMTM3Q96MX0 182 aa6.38□□□□□ -1.39
TRIM38-201ENST00000357085 MGME1Q9BQP7 344 aa6.38□□□□□ -1.39
TRIM38-201ENST00000357085 GABARAPL3Q9BY60 117 aa6.38□□□□□ -1.39
TRIM38-201ENST00000357085 TAS2R8Q9NYW2 309 aa6.38□□□□□ -1.39
TRIM38-201ENST00000357085 HCN3Q9P1Z3 774 aa6.38□□□□□ -1.39
TRIM38-201ENST00000357085 SRRDQ9UH36 339 aa6.38□□□□□ -1.39
TRIM38-201ENST00000357085 RUVBL1Q9Y265 456 aaKnown RBP6.38□□□□□ -1.39
TRIM38-201ENST00000357085 CSNK1G3Q9Y6M4 447 aa6.38□□□□□ -1.39
TRIM38-201ENST00000357085 GLYATL1P3A0A0U1RQE8 302 aa6.38□□□□□ -1.39
TRIM38-201ENST00000357085 AGR2O95994 175 aa6.38□□□□□ -1.39
TRIM38-201ENST00000357085 NFICP08651 508 aa6.38□□□□□ -1.39
TRIM38-201ENST00000357085 RGS6P49758 472 aa6.38□□□□□ -1.39
TRIM38-201ENST00000357085 LARP4Q71RC2 724 aaKnown RBP eCLIP6.38□□□□□ -1.39
TRIM38-201ENST00000357085 DEFB106AQ8N104 65 aa6.38□□□□□ -1.39
TRIM38-201ENST00000357085 REPS2Q8NFH8 660 aa6.38□□□□□ -1.39
TRIM38-201ENST00000357085 C8orf37Q96NL8 207 aa6.38□□□□□ -1.39
TRIM38-201ENST00000357085 GSDMCQ9BYG8 508 aa6.38□□□□□ -1.39
TRIM38-201ENST00000357085 ZYG11BQ9C0D3 744 aa6.38□□□□□ -1.39
TRIM38-201ENST00000357085 XRN2Q9H0D6 950 aaKnown RBP eCLIP6.38□□□□□ -1.395e-7■■■■■ 39.7
TRIM38-201ENST00000357085 XKR8Q9H6D3 395 aa6.38□□□□□ -1.39
TRIM38-201ENST00000357085 SCPEP1Q9HB40 452 aa6.38□□□□□ -1.39
TRIM38-201ENST00000357085 HMX1Q9NP08 348 aaPredicted RBP6.38□□□□□ -1.39
TRIM38-201ENST00000357085 ABCB9Q9NP78 766 aa6.38□□□□□ -1.39
TRIM38-201ENST00000357085 ABI2Q9NYB9 513 aaPredicted RBP6.38□□□□□ -1.39
TRIM38-201ENST00000357085 PCDHA9Q9Y5H5 950 aa6.38□□□□□ -1.39
TRIM38-201ENST00000357085 PDCD11Q14690 1871 aaKnown RBP6.38□□□□□ -1.39
TRIM38-201ENST00000357085 LACTBL1A8MY62 500 aa6.38□□□□□ -1.39
TRIM38-201ENST00000357085 TCP10L2B9ZVM9 353 aa6.38□□□□□ -1.39
TRIM38-201ENST00000357085 LYRM1O43325 122 aa6.38□□□□□ -1.39
TRIM38-201ENST00000357085 POU6F2P78424 691 aaPredicted RBP6.38□□□□□ -1.39
TRIM38-201ENST00000357085 BAATQ14032 418 aaPredicted RBP6.38□□□□□ -1.39
TRIM38-201ENST00000357085 DALRD3Q5D0E6 543 aaKnown RBP6.38□□□□□ -1.39
TRIM38-201ENST00000357085 ZNF678Q5SXM1 525 aa6.38□□□□□ -1.39
TRIM38-201ENST00000357085 RNF219Q5W0B1 726 aaPredicted RBP6.38□□□□□ -1.39
TRIM38-201ENST00000357085 CD276Q5ZPR3 534 aa6.38□□□□□ -1.39
TRIM38-201ENST00000357085 GPR149Q86SP6 731 aa6.38□□□□□ -1.39
TRIM38-201ENST00000357085 TPRA1Q86W33 373 aa6.38□□□□□ -1.39
TRIM38-201ENST00000357085 LRRC28Q86X40 367 aaPredicted RBP6.38□□□□□ -1.39
TRIM38-201ENST00000357085 CDK20Q8IZL9 346 aa6.38□□□□□ -1.39
TRIM38-201ENST00000357085 LRRC71Q8N4P6 559 aa6.38□□□□□ -1.39
TRIM38-201ENST00000357085 WDFY2Q96P53 400 aa6.38□□□□□ -1.39
TRIM38-201ENST00000357085 NLNQ9BYT8 704 aa6.38□□□□□ -1.39
TRIM38-201ENST00000357085 SARS2Q9NP81 518 aaKnown RBP6.38□□□□□ -1.39
TRIM38-201ENST00000357085 CKLFQ9UBR5 152 aa6.38□□□□□ -1.39
TRIM38-201ENST00000357085 KANTRA0A1W2PQU2 76 aa6.38□□□□□ -1.39
TRIM38-201ENST00000357085 RHCEP18577 417 aa6.38□□□□□ -1.39
TRIM38-201ENST00000357085 NTSP30990 170 aa6.38□□□□□ -1.39
TRIM38-201ENST00000357085 MTPNP58546 118 aa6.38□□□□□ -1.39
TRIM38-201ENST00000357085 RAB2AP61019 212 aa6.38□□□□□ -1.39
TRIM38-201ENST00000357085 SNRPGP62308 76 aaKnown RBP6.38□□□□□ -1.39
TRIM38-201ENST00000357085 GPR19Q15760 415 aa6.38□□□□□ -1.39
TRIM38-201ENST00000357085 C1orf220Q5T0J3 134 aa6.38□□□□□ -1.39
TRIM38-201ENST00000357085 LETMD1Q6P1Q0 360 aa6.38□□□□□ -1.39
TRIM38-201ENST00000357085 MOAP1Q96BY2 351 aa6.38□□□□□ -1.39
TRIM38-201ENST00000357085 NXPE2Q96DL1 559 aa6.38□□□□□ -1.39
TRIM38-201ENST00000357085 ZNF385DQ9H6B1 395 aa6.38□□□□□ -1.39
TRIM38-201ENST00000357085 CUEDC1Q9NWM3 386 aaPredicted RBP6.38□□□□□ -1.39
TRIM38-201ENST00000357085 SMPD4Q9NXE4 827 aa6.38□□□□□ -1.39
TRIM38-201ENST00000357085 C9JVG2 144 aa6.38□□□□□ -1.39
TRIM38-201ENST00000357085 MUSKO15146 869 aa6.38□□□□□ -1.39
TRIM38-201ENST00000357085 PROS1P07225 676 aa6.38□□□□□ -1.39
TRIM38-201ENST00000357085 IL3P08700 152 aa6.38□□□□□ -1.39
TRIM38-201ENST00000357085 NRLP54845 237 aa6.38□□□□□ -1.39
TRIM38-201ENST00000357085 FCGRTP55899 365 aa6.38□□□□□ -1.39
TRIM38-201ENST00000357085 CTBP1Q13363 440 aa6.38□□□□□ -1.39
TRIM38-201ENST00000357085 IRF5Q13568 498 aa6.38□□□□□ -1.39
TRIM38-201ENST00000357085 BCL7AQ4VC05 210 aa6.38□□□□□ -1.39
TRIM38-201ENST00000357085 SERPINA13PQ6UXR4 307 aa6.38□□□□□ -1.39
TRIM38-201ENST00000357085 GLT6D1Q7Z4J2 308 aa6.38□□□□□ -1.39
TRIM38-201ENST00000357085 OR6F1Q8NGZ6 308 aa6.38□□□□□ -1.39
TRIM38-201ENST00000357085 LRRN4Q8WUT4 740 aa6.38□□□□□ -1.39
TRIM38-201ENST00000357085 DOHHQ9BU89 302 aa6.38□□□□□ -1.39
TRIM38-201ENST00000357085 FNDC11Q9BVV2 318 aa6.38□□□□□ -1.39
TRIM38-201ENST00000357085 MMP28Q9H239 520 aa6.38□□□□□ -1.39
TRIM38-201ENST00000357085 DPEP3Q9H4B8 488 aa6.38□□□□□ -1.39
TRIM38-201ENST00000357085 LOC105371267A0A1B0GV96 52 aa6.38□□□□□ -1.39
TRIM38-201ENST00000357085 TLR4O00206 839 aa6.38□□□□□ -1.39
TRIM38-201ENST00000357085 UBA1P22314 1058 aaKnown RBP6.38□□□□□ -1.39
TRIM38-201ENST00000357085 HSPA7P48741 367 aa6.38□□□□□ -1.39
TRIM38-201ENST00000357085 SSBP1Q04837 148 aaKnown RBP6.38□□□□□ -1.39
TRIM38-201ENST00000357085 RAB40BQ12829 278 aa6.38□□□□□ -1.39
TRIM38-201ENST00000357085 AQP6Q13520 282 aa6.38□□□□□ -1.39
TRIM38-201ENST00000357085 TATDN3Q17R31 274 aa6.38□□□□□ -1.39
TRIM38-201ENST00000357085 SEZ6Q53EL9 994 aa6.38□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms