RNA–Protein interactions for RNA: ENST00000356147.3

PTPRA-203, Transcript of protein tyrosine phosphatase, receptor type A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTPRA, Length 3,135 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRA-203ENST00000356147 NELL1Q92832 810 aa9.8□□□□□ -0.84
PTPRA-203ENST00000356147 KATNAL1Q9BW62 490 aa9.8□□□□□ -0.84
PTPRA-203ENST00000356147 GPR62Q9BZJ7 368 aa9.8□□□□□ -0.84
PTPRA-203ENST00000356147 GABARAPL1Q9H0R8 117 aa9.8□□□□□ -0.84
PTPRA-203ENST00000356147 IMPAD1Q9NX62 359 aa9.8□□□□□ -0.84
PTPRA-203ENST00000356147 ZNF226Q9NYT6 803 aa9.8□□□□□ -0.84
PTPRA-203ENST00000356147 FZD4Q9ULV1 537 aa9.8□□□□□ -0.84
PTPRA-203ENST00000356147 PCDHB8Q9UN66 801 aa9.8□□□□□ -0.84
PTPRA-203ENST00000356147 DUSP12Q9UNI6 340 aa9.8□□□□□ -0.84
PTPRA-203ENST00000356147 CCRL2O00421 344 aa9.8□□□□□ -0.84
PTPRA-203ENST00000356147 GAPDHSO14556 408 aaPredicted RBP9.8□□□□□ -0.84
PTPRA-203ENST00000356147 LRRTM2O43300 516 aa9.8□□□□□ -0.84
PTPRA-203ENST00000356147 KDELR3O43731 214 aa9.8□□□□□ -0.84
PTPRA-203ENST00000356147 PCDH7O60245 1069 aa9.8□□□□□ -0.84
PTPRA-203ENST00000356147 RPL17P18621 184 aaKnown RBP9.8□□□□□ -0.84
PTPRA-203ENST00000356147 SSTR4P31391 388 aa9.8□□□□□ -0.84
PTPRA-203ENST00000356147 TNFSF8P32971 234 aa9.8□□□□□ -0.84
PTPRA-203ENST00000356147 TUBA1BP68363 451 aa9.8□□□□□ -0.84
PTPRA-203ENST00000356147 SPIBQ01892 262 aa9.8□□□□□ -0.84
PTPRA-203ENST00000356147 BOP1Q14137 746 aaKnown RBP9.8□□□□□ -0.84
PTPRA-203ENST00000356147 NFE2Q16621 373 aaPredicted RBP9.8□□□□□ -0.84
PTPRA-203ENST00000356147 LYPD8Q6UX82 237 aa9.8□□□□□ -0.84
PTPRA-203ENST00000356147 ZNF852Q6ZMS4 543 aa9.8□□□□□ -0.84
PTPRA-203ENST00000356147 TUBA1AQ71U36 451 aa9.8□□□□□ -0.84
PTPRA-203ENST00000356147 BCDIN3DQ7Z5W3 292 aaKnown RBP9.8□□□□□ -0.84
PTPRA-203ENST00000356147 TSEN54Q7Z6J9 526 aaKnown RBP9.8□□□□□ -0.84
PTPRA-203ENST00000356147 ZNF605Q86T29 641 aa9.8□□□□□ -0.84
PTPRA-203ENST00000356147 GALNT12Q8IXK2 581 aa9.8□□□□□ -0.84
PTPRA-203ENST00000356147 NAGSQ8N159 534 aa9.8□□□□□ -0.84
PTPRA-203ENST00000356147 DEPDC4Q8N2C3 294 aa9.8□□□□□ -0.84
PTPRA-203ENST00000356147 ELMOD1Q8N336 334 aa9.8□□□□□ -0.84
PTPRA-203ENST00000356147 B3GNT7Q8NFL0 401 aa9.8□□□□□ -0.84
PTPRA-203ENST00000356147 IPCEF1Q8WWN9 437 aaPredicted RBP9.8□□□□□ -0.84
PTPRA-203ENST00000356147 HRASLS5Q96KN8 279 aa9.8□□□□□ -0.84
PTPRA-203ENST00000356147 TPT1P8Q9HAU6 139 aa9.8□□□□□ -0.84
PTPRA-203ENST00000356147 SNTG1Q9NSN8 517 aa9.8□□□□□ -0.84
PTPRA-203ENST00000356147 ACSL6Q9UKU0 697 aa9.8□□□□□ -0.84
PTPRA-203ENST00000356147 RFXAPO00287 272 aa9.79□□□□□ -0.84
PTPRA-203ENST00000356147 SMAD6O43541 496 aaKnown RBP9.79□□□□□ -0.84
PTPRA-203ENST00000356147 SEMA3DO95025 777 aa9.79□□□□□ -0.84
PTPRA-203ENST00000356147 IGFBP1P08833 259 aaPredicted RBP9.79□□□□□ -0.84
PTPRA-203ENST00000356147 HOXB9P17482 250 aaPredicted RBP9.79□□□□□ -0.84
PTPRA-203ENST00000356147 DEFA1P59665 94 aa9.79□□□□□ -0.84
PTPRA-203ENST00000356147 DEFA3P59666 94 aa9.79□□□□□ -0.84
PTPRA-203ENST00000356147 MAP2K5Q13163 448 aa9.79□□□□□ -0.84
PTPRA-203ENST00000356147 NFATC2Q13469 925 aa9.79□□□□□ -0.84
PTPRA-203ENST00000356147 ARMC4Q5T2S8 1044 aa9.79□□□□□ -0.84
PTPRA-203ENST00000356147 LDLRAD1Q5T700 205 aa9.79□□□□□ -0.84
PTPRA-203ENST00000356147 ALG1LQ6GMV1 187 aa9.79□□□□□ -0.84
PTPRA-203ENST00000356147 FAHD1Q6P587 224 aa9.79□□□□□ -0.84
PTPRA-203ENST00000356147 ANKS3Q6ZW76 656 aa9.79□□□□□ -0.84
PTPRA-203ENST00000356147 VRK3Q8IV63 474 aa9.79□□□□□ -0.84
PTPRA-203ENST00000356147 KBTBD8Q8NFY9 601 aa9.79□□□□□ -0.84
PTPRA-203ENST00000356147 OR10G2Q8NGC3 310 aa9.79□□□□□ -0.84
PTPRA-203ENST00000356147 OR52E4Q8NGH9 312 aa9.79□□□□□ -0.84
PTPRA-203ENST00000356147 C7orf34Q96L11 122 aa9.79□□□□□ -0.84
PTPRA-203ENST00000356147 C8orf48Q96LL4 319 aa9.79□□□□□ -0.84
PTPRA-203ENST00000356147 TMEM45AQ9NWC5 275 aa9.79□□□□□ -0.84
PTPRA-203ENST00000356147 TAS2R9Q9NYW1 312 aa9.79□□□□□ -0.84
PTPRA-203ENST00000356147 NUFIP1Q9UHK0 495 aaKnown RBP9.79□□□□□ -0.84
PTPRA-203ENST00000356147 RPS6KA6Q9UK32 745 aa9.79□□□□□ -0.84
PTPRA-203ENST00000356147 TDRD15B5MCY1 1934 aaKnown RBP9.79□□□□□ -0.84
PTPRA-203ENST00000356147 CCDC88CQ9P219 2028 aa9.79□□□□□ -0.84
PTPRA-203ENST00000356147 PLXNA4Q9HCM2 1894 aa9.79□□□□□ -0.84
PTPRA-203ENST00000356147 SUV39H1O43463 412 aa9.79□□□□□ -0.84
PTPRA-203ENST00000356147 IGLV3-27P01718 113 aa9.79□□□□□ -0.84
PTPRA-203ENST00000356147 CORO1AP31146 461 aaKnown RBP9.79□□□□□ -0.84
PTPRA-203ENST00000356147 CRATP43155 626 aa9.79□□□□□ -0.84
PTPRA-203ENST00000356147 ITGA1P56199 1179 aa9.79□□□□□ -0.84
PTPRA-203ENST00000356147 WNT3P56703 355 aa9.79□□□□□ -0.84
PTPRA-203ENST00000356147 KCNJ10P78508 379 aa9.79□□□□□ -0.84
PTPRA-203ENST00000356147 CD83Q01151 205 aa9.79□□□□□ -0.84
PTPRA-203ENST00000356147 ZNF45Q02386 682 aa9.79□□□□□ -0.84
PTPRA-203ENST00000356147 PPIGQ13427 754 aaKnown RBP eCLIP9.79□□□□□ -0.841e-7■■□□□ 12.2
PTPRA-203ENST00000356147 CAMK2BQ13554 666 aa9.79□□□□□ -0.84
PTPRA-203ENST00000356147 DSC3Q14574 896 aa9.79□□□□□ -0.84
PTPRA-203ENST00000356147 NDUFA5Q16718 116 aa9.79□□□□□ -0.84
PTPRA-203ENST00000356147 EXOC3L2Q2M3D2 409 aa9.79□□□□□ -0.84
PTPRA-203ENST00000356147 LEXMQ3ZCV2 418 aa9.79□□□□□ -0.84
PTPRA-203ENST00000356147 Q5BKY6 102 aa9.79□□□□□ -0.84
PTPRA-203ENST00000356147 COX20Q5RI15 118 aa9.79□□□□□ -0.84
PTPRA-203ENST00000356147 C10orf62Q5T681 223 aaPredicted RBP9.79□□□□□ -0.84
PTPRA-203ENST00000356147 MFSD14CQ5VZR4 134 aa9.79□□□□□ -0.84
PTPRA-203ENST00000356147 PPP2R2DQ66LE6 453 aa9.79□□□□□ -0.84
PTPRA-203ENST00000356147 CBLL1Q75N03 491 aa9.79□□□□□ -0.84
PTPRA-203ENST00000356147 EIF3MQ7L2H7 374 aaKnown RBP9.79□□□□□ -0.84
PTPRA-203ENST00000356147 LAX1Q8IWV1 398 aa9.79□□□□□ -0.84
PTPRA-203ENST00000356147 OR4K1Q8NGD4 311 aa9.79□□□□□ -0.84
PTPRA-203ENST00000356147 WDR36Q8NI36 951 aaKnown RBP9.79□□□□□ -0.84
PTPRA-203ENST00000356147 UBASH3BQ8TF42 649 aa9.79□□□□□ -0.84
PTPRA-203ENST00000356147 MYDGFQ969H8 173 aa9.79□□□□□ -0.84
PTPRA-203ENST00000356147 MGLLQ99685 303 aa9.79□□□□□ -0.84
PTPRA-203ENST00000356147 NTMT1Q9BV86 223 aa9.79□□□□□ -0.84
PTPRA-203ENST00000356147 ZFYVE1Q9HBF4 777 aa9.79□□□□□ -0.84
PTPRA-203ENST00000356147 RANGRFQ9HD47 186 aaPredicted RBP9.79□□□□□ -0.84
PTPRA-203ENST00000356147 SH3BP4Q9P0V3 963 aa9.79□□□□□ -0.84
PTPRA-203ENST00000356147 TRPS1Q9UHF7 1281 aa9.79□□□□□ -0.84
PTPRA-203ENST00000356147 CLEC2DQ9UHP7 191 aa9.79□□□□□ -0.84
PTPRA-203ENST00000356147 MAN2B2Q9Y2E5 1009 aa9.79□□□□□ -0.84
PTPRA-203ENST00000356147 HSPE1-MOB4S4R3N1 261 aa9.79□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms