RNA–Protein interactions for RNA: ENST00000353317.9

TRIM55-204, Transcript of tripartite motif containing 55, humanhuman

TSL 1 (best) BASIC

Gene TRIM55, Length 2,624 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM55-204ENST00000353317 TMEM202A6NGA9 273 aa8.32□□□□□ -1.08
TRIM55-204ENST00000353317 ZNF99A8MXY4 864 aaPredicted RBP8.32□□□□□ -1.08
TRIM55-204ENST00000353317 FFAR3O14843 346 aa8.32□□□□□ -1.08
TRIM55-204ENST00000353317 GPR42O15529 346 aa8.32□□□□□ -1.08
TRIM55-204ENST00000353317 FFAR2O15552 330 aa8.32□□□□□ -1.08
TRIM55-204ENST00000353317 E2F6O75461 281 aa8.32□□□□□ -1.08
TRIM55-204ENST00000353317 JRKO75564 520 aa8.32□□□□□ -1.08
TRIM55-204ENST00000353317 SLC25A14O95258 325 aaPredicted RBP8.32□□□□□ -1.08
TRIM55-204ENST00000353317 TRIM16O95361 564 aa8.32□□□□□ -1.08
TRIM55-204ENST00000353317 GUCA1CO95843 209 aa8.32□□□□□ -1.08
TRIM55-204ENST00000353317 PRNPP04156 253 aa8.32□□□□□ -1.08
TRIM55-204ENST00000353317 PGRP06401 933 aa8.32□□□□□ -1.08
TRIM55-204ENST00000353317 ITGALP20701 1170 aa8.32□□□□□ -1.08
TRIM55-204ENST00000353317 CD6P30203 668 aa8.32□□□□□ -1.08
TRIM55-204ENST00000353317 AKT1P31749 480 aa8.32□□□□□ -1.08
TRIM55-204ENST00000353317 GDF5P43026 501 aa8.32□□□□□ -1.08
TRIM55-204ENST00000353317 HSPA7P48741 367 aa8.32□□□□□ -1.08
TRIM55-204ENST00000353317 CDK5R2Q13319 367 aa8.32□□□□□ -1.08
TRIM55-204ENST00000353317 RAPSNQ13702 412 aa8.32□□□□□ -1.08
TRIM55-204ENST00000353317 ARHGEF7Q14155 803 aa8.32□□□□□ -1.08
TRIM55-204ENST00000353317 ADPRMQ3LIE5 342 aa8.32□□□□□ -1.08
TRIM55-204ENST00000353317 GCNT7Q6ZNI0 430 aa8.32□□□□□ -1.08
TRIM55-204ENST00000353317 MTSS1LQ765P7 747 aa8.32□□□□□ -1.08
TRIM55-204ENST00000353317 MILR1Q7Z6M3 343 aa8.32□□□□□ -1.08
TRIM55-204ENST00000353317 VRK3Q8IV63 474 aa8.32□□□□□ -1.08
TRIM55-204ENST00000353317 ADHFE1Q8IWW8 467 aa8.32□□□□□ -1.08
TRIM55-204ENST00000353317 EID3Q8N140 333 aa8.32□□□□□ -1.08
TRIM55-204ENST00000353317 NETO1Q8TDF5 533 aa8.32□□□□□ -1.08
TRIM55-204ENST00000353317 SLC35B4Q969S0 331 aa8.32□□□□□ -1.08
TRIM55-204ENST00000353317 ITPKCQ96DU7 683 aa8.32□□□□□ -1.08
TRIM55-204ENST00000353317 VMP1Q96GC9 406 aa8.32□□□□□ -1.08
TRIM55-204ENST00000353317 FAM83DQ9H4H8 585 aa8.32□□□□□ -1.08
TRIM55-204ENST00000353317 KAT8Q9H7Z6 458 aaKnown RBP8.32□□□□□ -1.08
TRIM55-204ENST00000353317 VPS13AQ96RL7 3174 aa8.31□□□□□ -1.08
TRIM55-204ENST00000353317 A0A1W2PQF6 199 aa8.31□□□□□ -1.08
TRIM55-204ENST00000353317 SLC16A6O15403 523 aa8.31□□□□□ -1.08
TRIM55-204ENST00000353317 MITFO75030 526 aaPredicted RBP8.31□□□□□ -1.08
TRIM55-204ENST00000353317 CREG1O75629 220 aa8.31□□□□□ -1.08
TRIM55-204ENST00000353317 DNAJB5O75953 348 aa8.31□□□□□ -1.08
TRIM55-204ENST00000353317 GABARAPO95166 117 aa8.31□□□□□ -1.08
TRIM55-204ENST00000353317 OTCP00480 354 aa8.31□□□□□ -1.08
TRIM55-204ENST00000353317 FTH1P02794 183 aa8.31□□□□□ -1.08
TRIM55-204ENST00000353317 ESR1P03372 595 aa8.31□□□□□ -1.08
TRIM55-204ENST00000353317 CCDC159P0C7I6 412 aa8.31□□□□□ -1.08
TRIM55-204ENST00000353317 ELFN1P0C7U0 828 aa8.31□□□□□ -1.08
TRIM55-204ENST00000353317 ACVR2AP27037 513 aa8.31□□□□□ -1.08
TRIM55-204ENST00000353317 ALDH4A1P30038 563 aa8.31□□□□□ -1.08
TRIM55-204ENST00000353317 CCR7P32248 378 aa8.31□□□□□ -1.08
TRIM55-204ENST00000353317 RYKP34925 604 aa8.31□□□□□ -1.08
TRIM55-204ENST00000353317 RPS3AP61247 264 aaKnown RBP8.31□□□□□ -1.08
TRIM55-204ENST00000353317 LSM3P62310 102 aaKnown RBP8.31□□□□□ -1.08
TRIM55-204ENST00000353317 IL5RAQ01344 420 aa8.31□□□□□ -1.08
TRIM55-204ENST00000353317 TOP3AQ13472 1001 aaPredicted RBP8.31□□□□□ -1.08
TRIM55-204ENST00000353317 CAMK2GQ13555 558 aaPredicted RBP8.31□□□□□ -1.08
TRIM55-204ENST00000353317 ACOX1Q15067 660 aa8.31□□□□□ -1.08
TRIM55-204ENST00000353317 GPR33Q49SQ1 333 aa8.31□□□□□ -1.08
TRIM55-204ENST00000353317 RUNDC3AQ59EK9 446 aa8.31□□□□□ -1.08
TRIM55-204ENST00000353317 CERS6Q6ZMG9 384 aa8.31□□□□□ -1.08
TRIM55-204ENST00000353317 LILRA3Q8N6C8 439 aaPredicted RBP8.31□□□□□ -1.08
TRIM55-204ENST00000353317 ARL10Q8N8L6 244 aa8.31□□□□□ -1.08
TRIM55-204ENST00000353317 PLA2G15Q8NCC3 412 aa8.31□□□□□ -1.08
TRIM55-204ENST00000353317 PIK3C3Q8NEB9 887 aa8.31□□□□□ -1.08
TRIM55-204ENST00000353317 OR7A2PQ8NGA2 310 aa8.31□□□□□ -1.08
TRIM55-204ENST00000353317 OR52E4Q8NGH9 312 aa8.31□□□□□ -1.08
TRIM55-204ENST00000353317 OR5K1Q8NHB7 308 aa8.31□□□□□ -1.08
TRIM55-204ENST00000353317 NDNFQ8TB73 568 aa8.31□□□□□ -1.08
TRIM55-204ENST00000353317 FBLIM1Q8WUP2 373 aa8.31□□□□□ -1.08
TRIM55-204ENST00000353317 NCLNQ969V3 563 aa8.31□□□□□ -1.08
TRIM55-204ENST00000353317 PPP3R2Q96LZ3 170 aa8.31□□□□□ -1.08
TRIM55-204ENST00000353317 NECTIN4Q96NY8 510 aa8.31□□□□□ -1.08
TRIM55-204ENST00000353317 CDX2Q99626 313 aaPredicted RBP8.31□□□□□ -1.08
TRIM55-204ENST00000353317 BARD1Q99728 777 aaKnown RBP8.31□□□□□ -1.08
TRIM55-204ENST00000353317 C19orf43Q9BQ61 176 aa8.31□□□□□ -1.08
TRIM55-204ENST00000353317 ALOXE3Q9BYJ1 711 aa8.31□□□□□ -1.08
TRIM55-204ENST00000353317 WDR37Q9Y2I8 494 aa8.31□□□□□ -1.08
TRIM55-204ENST00000353317 DHRS7Q9Y394 339 aa8.31□□□□□ -1.08
TRIM55-204ENST00000353317 PCDHGB1Q9Y5G3 927 aa8.31□□□□□ -1.08
TRIM55-204ENST00000353317 TNPO3Q9Y5L0 923 aaKnown RBP8.31□□□□□ -1.08
TRIM55-204ENST00000353317 PIAS3Q9Y6X2 628 aa8.31□□□□□ -1.08
TRIM55-204ENST00000353317 BCKDKO14874 412 aa8.31□□□□□ -1.08
TRIM55-204ENST00000353317 TAPBPO15533 448 aa8.31□□□□□ -1.08
TRIM55-204ENST00000353317 RECQL5O94762 991 aaPredicted RBP8.31□□□□□ -1.08
TRIM55-204ENST00000353317 SCELO95171 688 aa8.31□□□□□ -1.08
TRIM55-204ENST00000353317 ANGPTL1O95841 491 aa8.31□□□□□ -1.08
TRIM55-204ENST00000353317 SERPINA1P01009 418 aa8.31□□□□□ -1.08
TRIM55-204ENST00000353317 RETP07949 1114 aa8.31□□□□□ -1.08
TRIM55-204ENST00000353317 CYP2A6P11509 494 aaPredicted RBP8.31□□□□□ -1.08
TRIM55-204ENST00000353317 C6P13671 934 aa8.31□□□□□ -1.08
TRIM55-204ENST00000353317 ZNF30P17039 623 aa8.31□□□□□ -1.08
TRIM55-204ENST00000353317 MSH3P20585 1137 aa8.31□□□□□ -1.08
TRIM55-204ENST00000353317 RPS3P23396 243 aaKnown RBP eCLIP8.31□□□□□ -1.08
TRIM55-204ENST00000353317 EIF2B2P49770 351 aaKnown RBP8.31□□□□□ -1.08
TRIM55-204ENST00000353317 CTSCP53634 463 aa8.31□□□□□ -1.08
TRIM55-204ENST00000353317 TFF2Q03403 129 aa8.31□□□□□ -1.08
TRIM55-204ENST00000353317 VAC14Q08AM6 782 aa8.31□□□□□ -1.08
TRIM55-204ENST00000353317 LAPTM4AQ15012 233 aa8.31□□□□□ -1.08
TRIM55-204ENST00000353317 AGBL4Q5VU57 503 aa8.31□□□□□ -1.08
TRIM55-204ENST00000353317 LAIR1Q6GTX8 287 aa8.31□□□□□ -1.08
TRIM55-204ENST00000353317 SUSD1Q6UWL2 747 aa8.31□□□□□ -1.08
TRIM55-204ENST00000353317 ERN2Q76MJ5 926 aaKnown RBP8.31□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms