RNA–Protein interactions for RNA: ENST00000351288.10

SMPD4-201, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 2 BASIC

Gene SMPD4, Length 3,661 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-201ENST00000351288 VNN3Q9NY84 501 aa10.05□□□□□ -0.8
SMPD4-201ENST00000351288 SLC13A4Q9UKG4 626 aa10.05□□□□□ -0.8
SMPD4-201ENST00000351288 CACNA1EQ15878 2313 aa10.05□□□□□ -0.8
SMPD4-201ENST00000351288 OR52A4PA6NMU1 304 aa10.05□□□□□ -0.8
SMPD4-201ENST00000351288 ZNF821O75541 412 aaPredicted RBP10.05□□□□□ -0.8
SMPD4-201ENST00000351288 CDH1P12830 882 aa10.05□□□□□ -0.8
SMPD4-201ENST00000351288 HTR1EP28566 365 aa10.05□□□□□ -0.8
SMPD4-201ENST00000351288 ERVK-21P61565 698 aa10.05□□□□□ -0.8
SMPD4-201ENST00000351288 PHEXP78562 749 aa10.05□□□□□ -0.8
SMPD4-201ENST00000351288 DCTN2Q13561 401 aaKnown RBP10.05□□□□□ -0.8
SMPD4-201ENST00000351288 DAG1Q14118 895 aa10.05□□□□□ -0.8
SMPD4-201ENST00000351288 SMN1Q16637 294 aaKnown RBP10.05□□□□□ -0.8
SMPD4-201ENST00000351288 CYP2A13Q16696 494 aa10.05□□□□□ -0.8
SMPD4-201ENST00000351288 C5orf22Q49AR2 442 aa10.05□□□□□ -0.8
SMPD4-201ENST00000351288 FRMD1Q8N878 549 aa10.05□□□□□ -0.8
SMPD4-201ENST00000351288 MFSD2AQ8NA29 543 aa10.05□□□□□ -0.8
SMPD4-201ENST00000351288 TMEM145Q8NBT3 493 aa10.05□□□□□ -0.8
SMPD4-201ENST00000351288 OSCP1Q8WVF1 389 aa10.05□□□□□ -0.8
SMPD4-201ENST00000351288 ISG20Q96AZ6 181 aaKnown RBP10.05□□□□□ -0.8
SMPD4-201ENST00000351288 RPP25Q9BUL9 199 aaKnown RBP10.05□□□□□ -0.8
SMPD4-201ENST00000351288 TRMT61BQ9BVS5 477 aaKnown RBP10.05□□□□□ -0.8
SMPD4-201ENST00000351288 PCDHB3Q9Y5E6 796 aa10.05□□□□□ -0.8
SMPD4-201ENST00000351288 FRMPD3Q5JV73 1810 aa10.04□□□□□ -0.8
SMPD4-201ENST00000351288 GSAPA4D1B5 854 aa10.04□□□□□ -0.8
SMPD4-201ENST00000351288 TMEM247A6NEH6 219 aa10.04□□□□□ -0.8
SMPD4-201ENST00000351288 PCDH7O60245 1069 aa10.04□□□□□ -0.8
SMPD4-201ENST00000351288 CTSLP07711 333 aa10.04□□□□□ -0.8
SMPD4-201ENST00000351288 ENGP17813 658 aa10.04□□□□□ -0.8
SMPD4-201ENST00000351288 GGT1P19440 569 aa10.04□□□□□ -0.8
SMPD4-201ENST00000351288 IL12RB1P42701 662 aa10.04□□□□□ -0.8
SMPD4-201ENST00000351288 TBPL1P62380 186 aa10.04□□□□□ -0.8
SMPD4-201ENST00000351288 MC1RQ01726 317 aa10.04□□□□□ -0.8
SMPD4-201ENST00000351288 PON2Q15165 354 aa10.04□□□□□ -0.8
SMPD4-201ENST00000351288 CTU2Q2VPK5 515 aaKnown RBP10.04□□□□□ -0.8
SMPD4-201ENST00000351288 CCNYL2Q5T2Q4 361 aa10.04□□□□□ -0.8
SMPD4-201ENST00000351288 FAM46CQ5VWP2 391 aa10.04□□□□□ -0.8
SMPD4-201ENST00000351288 MED27Q6P2C8 311 aa10.04□□□□□ -0.8
SMPD4-201ENST00000351288 ZNF551Q7Z340 670 aaPredicted RBP10.04□□□□□ -0.8
SMPD4-201ENST00000351288 PTRH1Q86Y79 214 aaKnown RBP10.04□□□□□ -0.8
SMPD4-201ENST00000351288 NPAS3Q8IXF0 933 aa10.04□□□□□ -0.8
SMPD4-201ENST00000351288 SMYD1Q8NB12 490 aa10.04□□□□□ -0.8
SMPD4-201ENST00000351288 PPCDCQ96CD2 204 aa10.04□□□□□ -0.8
SMPD4-201ENST00000351288 DUS3LQ96G46 650 aaKnown RBP10.04□□□□□ -0.8
SMPD4-201ENST00000351288 TMEM121BQ9BXQ6 578 aaPredicted RBP10.04□□□□□ -0.8
SMPD4-201ENST00000351288 PPT2Q9UMR5 302 aa10.04□□□□□ -0.8
SMPD4-201ENST00000351288 SAMHD1Q9Y3Z3 626 aaKnown RBP10.04□□□□□ -0.8
SMPD4-201ENST00000351288 CCL27Q9Y4X3 112 aa10.04□□□□□ -0.8
SMPD4-201ENST00000351288 OTOL1A6NHN0 477 aaPredicted RBP10.04□□□□□ -0.8
SMPD4-201ENST00000351288 NUDT7P0C024 238 aa10.04□□□□□ -0.8
SMPD4-201ENST00000351288 EBLN1P0CF75 366 aa10.04□□□□□ -0.8
SMPD4-201ENST00000351288 RAP2AP10114 183 aa10.04□□□□□ -0.8
SMPD4-201ENST00000351288 ADRB3P13945 408 aa10.04□□□□□ -0.8
SMPD4-201ENST00000351288 PSMB5P28074 263 aa10.04□□□□□ -0.8
SMPD4-201ENST00000351288 SSR2P43308 183 aa10.04□□□□□ -0.8
SMPD4-201ENST00000351288 PXNP49023 591 aaPredicted RBP10.04□□□□□ -0.8
SMPD4-201ENST00000351288 EMP3P54852 163 aa10.04□□□□□ -0.8
SMPD4-201ENST00000351288 RPS26P62854 115 aaKnown RBP10.04□□□□□ -0.8
SMPD4-201ENST00000351288 RUNX3Q13761 415 aa10.04□□□□□ -0.8
SMPD4-201ENST00000351288 DMC1Q14565 340 aa10.04□□□□□ -0.8
SMPD4-201ENST00000351288 NOXRED1Q6NXP6 359 aa10.04□□□□□ -0.8
SMPD4-201ENST00000351288 LILRA6Q6PI73 481 aa10.04□□□□□ -0.8
SMPD4-201ENST00000351288 Q6ZPB1 254 aaPredicted RBP10.04□□□□□ -0.8
SMPD4-201ENST00000351288 ERN2Q76MJ5 926 aaKnown RBP10.04□□□□□ -0.8
SMPD4-201ENST00000351288 ZNF548Q8NEK5 533 aaPredicted RBP10.04□□□□□ -0.8
SMPD4-201ENST00000351288 VANGL1Q8TAA9 524 aaPredicted RBP10.04□□□□□ -0.8
SMPD4-201ENST00000351288 STON2Q8WXE9 905 aa10.04□□□□□ -0.8
SMPD4-201ENST00000351288 NELL1Q92832 810 aa10.04□□□□□ -0.8
SMPD4-201ENST00000351288 UGT2B28Q9BY64 529 aa10.04□□□□□ -0.8
SMPD4-201ENST00000351288 LHPPQ9H008 270 aa10.04□□□□□ -0.8
SMPD4-201ENST00000351288 HEBP1Q9NRV9 189 aa10.04□□□□□ -0.8
SMPD4-201ENST00000351288 MAGEL2Q9UJ55 1249 aa10.04□□□□□ -0.8
SMPD4-201ENST00000351288 ABCG2Q9UNQ0 655 aa10.04□□□□□ -0.8
SMPD4-201ENST00000351288 TANC1Q9C0D5 1861 aa10.04□□□□□ -0.8
SMPD4-201ENST00000351288 ANAPC1Q9H1A4 1944 aa10.04□□□□□ -0.8
SMPD4-201ENST00000351288 CLIC1O00299 241 aa10.04□□□□□ -0.8
SMPD4-201ENST00000351288 KIAA0355O15063 1070 aa10.04□□□□□ -0.8
SMPD4-201ENST00000351288 ALPLP05186 524 aa10.04□□□□□ -0.8
SMPD4-201ENST00000351288 C8orf89P0DMQ9 161 aa10.04□□□□□ -0.8
SMPD4-201ENST00000351288 JAK1P23458 1154 aa10.04□□□□□ -0.8
SMPD4-201ENST00000351288 OR1E2P47887 323 aa10.04□□□□□ -0.8
SMPD4-201ENST00000351288 CLDN2P57739 230 aa10.04□□□□□ -0.8
SMPD4-201ENST00000351288 RAB8AP61006 207 aa10.04□□□□□ -0.8
SMPD4-201ENST00000351288 OCA2Q04671 838 aa10.04□□□□□ -0.8
SMPD4-201ENST00000351288 ELAVL3Q14576 367 aaKnown RBP10.04□□□□□ -0.8
SMPD4-201ENST00000351288 ZBED5Q49AG3 693 aa10.04□□□□□ -0.8
SMPD4-201ENST00000351288 MPP7Q5T2T1 576 aa10.04□□□□□ -0.8
SMPD4-201ENST00000351288 ERI1Q8IV48 349 aaKnown RBP10.04□□□□□ -0.8
SMPD4-201ENST00000351288 EID3Q8N140 333 aa10.04□□□□□ -0.8
SMPD4-201ENST00000351288 TERB1Q8NA31 727 aa10.04□□□□□ -0.8
SMPD4-201ENST00000351288 ZCCHC10Q8TBK6 192 aa10.04□□□□□ -0.8
SMPD4-201ENST00000351288 XAGE5Q8WWM1 108 aa10.04□□□□□ -0.8
SMPD4-201ENST00000351288 NEIL2Q969S2 332 aa10.04□□□□□ -0.8
SMPD4-201ENST00000351288 EPS8L2Q9H6S3 715 aa10.04□□□□□ -0.8
SMPD4-201ENST00000351288 WDR26Q9H7D7 661 aa10.04□□□□□ -0.8
SMPD4-201ENST00000351288 KLHL3Q9UH77 587 aa10.04□□□□□ -0.8
SMPD4-201ENST00000351288 FBXW2Q9UKT8 454 aa10.04□□□□□ -0.8
SMPD4-201ENST00000351288 ERVK-11Q9UQG0 969 aa10.04□□□□□ -0.8
SMPD4-201ENST00000351288 TESMINQ9Y4I5 508 aa10.04□□□□□ -0.8
SMPD4-201ENST00000351288 LINC01565O15544 149 aa10.03□□□□□ -0.8
SMPD4-201ENST00000351288 CREG1O75629 220 aa10.03□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms