RNA–Protein interactions for RNA: ENST00000346569.6

ECM1-201, Transcript of extracellular matrix protein 1, humanhuman

TSL 1 (best) BASIC

Gene ECM1, Length 1,444 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECM1-201ENST00000346569 AQP9O43315 295 aa10.53□□□□□ -0.72
ECM1-201ENST00000346569 NOBOXO60393 691 aa10.53□□□□□ -0.72
ECM1-201ENST00000346569 PIAS2O75928 621 aa10.53□□□□□ -0.72
ECM1-201ENST00000346569 KLHL18O94889 574 aa10.53□□□□□ -0.72
ECM1-201ENST00000346569 EZRP15311 586 aaKnown RBP10.53□□□□□ -0.72
ECM1-201ENST00000346569 SDC1P18827 310 aa10.53□□□□□ -0.72
ECM1-201ENST00000346569 MAPK1P28482 360 aa10.53□□□□□ -0.72
ECM1-201ENST00000346569 CMPK1P30085 196 aa10.53□□□□□ -0.72
ECM1-201ENST00000346569 SERPINB1P30740 379 aa10.53□□□□□ -0.72
ECM1-201ENST00000346569 CTSKP43235 329 aa10.53□□□□□ -0.72
ECM1-201ENST00000346569 FASLGP48023 281 aa10.53□□□□□ -0.72
ECM1-201ENST00000346569 RXRGP48443 463 aa10.53□□□□□ -0.72
ECM1-201ENST00000346569 MXRA7P84157 204 aa10.53□□□□□ -0.72
ECM1-201ENST00000346569 SRSF5Q13243 272 aaKnown RBP10.53□□□□□ -0.72
ECM1-201ENST00000346569 SIM2Q14190 667 aaPredicted RBP10.53□□□□□ -0.72
ECM1-201ENST00000346569 PTGR1Q14914 329 aa10.53□□□□□ -0.72
ECM1-201ENST00000346569 RBBP5Q15291 538 aaKnown RBP10.53□□□□□ -0.72
ECM1-201ENST00000346569 REP15Q6BDI9 236 aa10.53□□□□□ -0.72
ECM1-201ENST00000346569 TRIM48Q8IWZ4 208 aa10.53□□□□□ -0.72
ECM1-201ENST00000346569 FAM20CQ8IXL6 584 aa10.53□□□□□ -0.72
ECM1-201ENST00000346569 DEFB107AQ8IZN7 70 aa10.53□□□□□ -0.72
ECM1-201ENST00000346569 PGAM4Q8N0Y7 254 aa10.53□□□□□ -0.72
ECM1-201ENST00000346569 METTL4Q8N3J2 472 aa10.53□□□□□ -0.72
ECM1-201ENST00000346569 ARL14Q8N4G2 192 aa10.53□□□□□ -0.72
ECM1-201ENST00000346569 DTWD2Q8NBA8 298 aa10.53□□□□□ -0.72
ECM1-201ENST00000346569 GLB1L3Q8NCI6 653 aaPredicted RBP10.53□□□□□ -0.72
ECM1-201ENST00000346569 FAM13CQ8NE31 585 aa10.53□□□□□ -0.72
ECM1-201ENST00000346569 PUM2Q8TB72 1066 aaKnown RBP eCLIP10.53□□□□□ -0.72
ECM1-201ENST00000346569 CREB3L4Q8TEY5 395 aa10.53□□□□□ -0.72
ECM1-201ENST00000346569 ZC3H10Q96K80 434 aaKnown RBP10.53□□□□□ -0.72
ECM1-201ENST00000346569 EGLN2Q96KS0 407 aa10.53□□□□□ -0.72
ECM1-201ENST00000346569 SERPINI1Q99574 410 aa10.53□□□□□ -0.72
ECM1-201ENST00000346569 DPH7Q9BTV6 452 aa10.53□□□□□ -0.72
ECM1-201ENST00000346569 THTPAQ9BU02 230 aa10.53□□□□□ -0.72
ECM1-201ENST00000346569 OR51B5Q9H339 312 aa10.53□□□□□ -0.72
ECM1-201ENST00000346569 CLMPQ9H6B4 373 aa10.53□□□□□ -0.72
ECM1-201ENST00000346569 UCK1Q9HA47 277 aa10.53□□□□□ -0.72
ECM1-201ENST00000346569 TMEM74BQ9NUR3 256 aa10.53□□□□□ -0.72
ECM1-201ENST00000346569 SNX7Q9UNH6 387 aa10.53□□□□□ -0.72
ECM1-201ENST00000346569 ENTPD2Q9Y5L3 495 aa10.53□□□□□ -0.72
ECM1-201ENST00000346569 SEC23IPQ9Y6Y8 1000 aaKnown RBP10.53□□□□□ -0.72
ECM1-201ENST00000346569 ZDBF2Q9HCK1 2354 aa10.53□□□□□ -0.72
ECM1-201ENST00000346569 TDRD6O60522 2096 aaKnown RBP10.53□□□□□ -0.72
ECM1-201ENST00000346569 PIEZO1Q92508 2521 aa10.53□□□□□ -0.72
ECM1-201ENST00000346569 THADAQ6YHU6 1953 aa10.52□□□□□ -0.72
ECM1-201ENST00000346569 OR6C74A6NCV1 312 aa10.52□□□□□ -0.73
ECM1-201ENST00000346569 ANKDD1BA6NHY2 528 aa10.52□□□□□ -0.73
ECM1-201ENST00000346569 MRASO14807 208 aa10.52□□□□□ -0.73
ECM1-201ENST00000346569 EEDO75530 441 aaKnown RBP10.52□□□□□ -0.73
ECM1-201ENST00000346569 CLEC3AO75596 197 aa10.52□□□□□ -0.73
ECM1-201ENST00000346569 CCNDBP1O95273 360 aa10.52□□□□□ -0.73
ECM1-201ENST00000346569 POLR2CP19387 275 aaPredicted RBP10.52□□□□□ -0.73
ECM1-201ENST00000346569 GRIA3P42263 894 aa10.52□□□□□ -0.73
ECM1-201ENST00000346569 DPP6P42658 865 aa10.52□□□□□ -0.73
ECM1-201ENST00000346569 NUDT2P50583 147 aa10.52□□□□□ -0.73
ECM1-201ENST00000346569 C21orf59P57076 290 aa10.52□□□□□ -0.73
ECM1-201ENST00000346569 C21orf58P58505 322 aa10.52□□□□□ -0.73
ECM1-201ENST00000346569 PHC1P78364 1004 aa10.52□□□□□ -0.73
ECM1-201ENST00000346569 HHEXQ03014 270 aa10.52□□□□□ -0.73
ECM1-201ENST00000346569 ACSM2AQ08AH3 577 aa10.52□□□□□ -0.73
ECM1-201ENST00000346569 ART3Q13508 389 aa10.52□□□□□ -0.73
ECM1-201ENST00000346569 ZIC1Q15915 447 aa10.52□□□□□ -0.73
ECM1-201ENST00000346569 MMEL1Q495T6 779 aa10.52□□□□□ -0.73
ECM1-201ENST00000346569 SPIN4Q56A73 249 aa10.52□□□□□ -0.73
ECM1-201ENST00000346569 PAGE3Q5JUK9 113 aa10.52□□□□□ -0.73
ECM1-201ENST00000346569 LYSMD4Q5XG99 296 aa10.52□□□□□ -0.73
ECM1-201ENST00000346569 ACSM2BQ68CK6 577 aa10.52□□□□□ -0.73
ECM1-201ENST00000346569 FBXO42Q6P3S6 717 aa10.52□□□□□ -0.73
ECM1-201ENST00000346569 C16orf89Q6UX73 402 aa10.52□□□□□ -0.73
ECM1-201ENST00000346569 PAQR7Q86WK9 346 aa10.52□□□□□ -0.73
ECM1-201ENST00000346569 SCUBE1Q8IWY4 988 aa10.52□□□□□ -0.73
ECM1-201ENST00000346569 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP10.52□□□□□ -0.73
ECM1-201ENST00000346569 FAM9CQ8IZT9 166 aa10.52□□□□□ -0.73
ECM1-201ENST00000346569 DPP10Q8N608 796 aa10.52□□□□□ -0.73
ECM1-201ENST00000346569 C1orf52Q8N6N3 182 aaKnown RBP10.52□□□□□ -0.73
ECM1-201ENST00000346569 ZNF548Q8NEK5 533 aaPredicted RBP10.52□□□□□ -0.73
ECM1-201ENST00000346569 GPR156Q8NFN8 814 aa10.52□□□□□ -0.73
ECM1-201ENST00000346569 VPS33AQ96AX1 596 aa10.52□□□□□ -0.73
ECM1-201ENST00000346569 ROPN1LQ96C74 230 aa10.52□□□□□ -0.73
ECM1-201ENST00000346569 GPATCH1Q9BRR8 931 aaKnown RBP10.52□□□□□ -0.73
ECM1-201ENST00000346569 MS4A8Q9BY19 250 aa10.52□□□□□ -0.73
ECM1-201ENST00000346569 DPY30Q9C005 99 aa10.52□□□□□ -0.73
ECM1-201ENST00000346569 PILRBQ9UKJ0 227 aa10.52□□□□□ -0.73
ECM1-201ENST00000346569 PCDHGA7Q9Y5G6 932 aa10.52□□□□□ -0.73
ECM1-201ENST00000346569 CSNK1G3Q9Y6M4 447 aa10.52□□□□□ -0.73
ECM1-201ENST00000346569 KMT2EQ8IZD2 1858 aa10.52□□□□□ -0.73
ECM1-201ENST00000346569 HEATR5BQ9P2D3 2071 aa10.52□□□□□ -0.73
ECM1-201ENST00000346569 SDK1Q7Z5N4 2213 aa10.52□□□□□ -0.73
ECM1-201ENST00000346569 CFAP54Q96N23 3096 aa10.51□□□□□ -0.73
ECM1-201ENST00000346569 OR2A25A4D2G3 310 aa10.51□□□□□ -0.73
ECM1-201ENST00000346569 CCDC154A6NI56 674 aa10.51□□□□□ -0.73
ECM1-201ENST00000346569 H0YHG0 523 aa10.51□□□□□ -0.73
ECM1-201ENST00000346569 NR5A2O00482 541 aa10.51□□□□□ -0.73
ECM1-201ENST00000346569 OR1F1O43749 312 aa10.51□□□□□ -0.73
ECM1-201ENST00000346569 MGRN1O60291 552 aa10.51□□□□□ -0.73
ECM1-201ENST00000346569 PRMT3O60678 531 aa10.51□□□□□ -0.73
ECM1-201ENST00000346569 SH3BGRLO75368 114 aa10.51□□□□□ -0.73
ECM1-201ENST00000346569 SEMA3DO95025 777 aa10.51□□□□□ -0.73
ECM1-201ENST00000346569 FKBP9O95302 570 aa10.51□□□□□ -0.73
ECM1-201ENST00000346569 NPPAP01160 153 aa10.51□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms