RNA–Protein interactions for RNA: ENST00000343200.9

VCAN-203, Transcript of versican, humanhuman

TSL 1 (best) BASIC

Gene VCAN, Length 9,455 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-203ENST00000343200 TATDN1Q6P1N9 297 aa6.01□□□□□ -1.45
VCAN-203ENST00000343200 ZNF852Q6ZMS4 543 aa6.01□□□□□ -1.45
VCAN-203ENST00000343200 TRIM46Q7Z4K8 759 aa6.01□□□□□ -1.45
VCAN-203ENST00000343200 OR13J1Q8NGT2 312 aa6.01□□□□□ -1.45
VCAN-203ENST00000343200 SLC5A11Q8WWX8 675 aa6.01□□□□□ -1.45
VCAN-203ENST00000343200 LRRC46Q96FV0 321 aa6.01□□□□□ -1.45
VCAN-203ENST00000343200 BARD1Q99728 777 aaKnown RBP6.01□□□□□ -1.45
VCAN-203ENST00000343200 PLEKHA3Q9HB20 300 aa6.01□□□□□ -1.45
VCAN-203ENST00000343200 CCNL1Q9UK58 526 aaPredicted RBP6.01□□□□□ -1.45
VCAN-203ENST00000343200 A0A1B0GVM2 712 aa6.01□□□□□ -1.45
VCAN-203ENST00000343200 TCAF2A6NFQ2 919 aa6.01□□□□□ -1.45
VCAN-203ENST00000343200 NPIPA2E9PIF3 369 aa6.01□□□□□ -1.45
VCAN-203ENST00000343200 NPIPA5E9PKD4 350 aa6.01□□□□□ -1.45
VCAN-203ENST00000343200 NPIPA3F8WFD2 350 aa6.01□□□□□ -1.45
VCAN-203ENST00000343200 NMT2O60551 498 aa6.01□□□□□ -1.45
VCAN-203ENST00000343200 SGPL1O95470 568 aa6.01□□□□□ -1.45
VCAN-203ENST00000343200 RAB3DO95716 219 aa6.01□□□□□ -1.45
VCAN-203ENST00000343200 APOA2P02652 100 aa6.01□□□□□ -1.45
VCAN-203ENST00000343200 PAX6P26367 422 aa6.01□□□□□ -1.45
VCAN-203ENST00000343200 HLA-FP30511 346 aa6.01□□□□□ -1.45
VCAN-203ENST00000343200 CRISP1P54107 249 aa6.01□□□□□ -1.45
VCAN-203ENST00000343200 PPATQ06203 517 aa6.01□□□□□ -1.45
VCAN-203ENST00000343200 LCP2Q13094 533 aa6.01□□□□□ -1.45
VCAN-203ENST00000343200 GTF2H2Q13888 395 aa6.01□□□□□ -1.45
VCAN-203ENST00000343200 PRPF38BQ5VTL8 546 aaKnown RBP6.01□□□□□ -1.45
VCAN-203ENST00000343200 DUPD1Q68J44 220 aa6.01□□□□□ -1.45
VCAN-203ENST00000343200 CIAPIN1Q6FI81 312 aa6.01□□□□□ -1.45
VCAN-203ENST00000343200 GTF2H2CQ6P1K8 395 aa6.01□□□□□ -1.45
VCAN-203ENST00000343200 ABRAQ8N0Z2 381 aa6.01□□□□□ -1.45
VCAN-203ENST00000343200 SLC30A7Q8NEW0 376 aa6.01□□□□□ -1.45
VCAN-203ENST00000343200 OR8S1Q8NH09 359 aa6.01□□□□□ -1.45
VCAN-203ENST00000343200 TXNDC15Q96J42 360 aa6.01□□□□□ -1.45
VCAN-203ENST00000343200 DNTTIP1Q9H147 329 aa6.01□□□□□ -1.45
VCAN-203ENST00000343200 IFT22Q9H7X7 185 aa6.01□□□□□ -1.45
VCAN-203ENST00000343200 NPIPA1Q9UND3 350 aa6.01□□□□□ -1.45
VCAN-203ENST00000343200 WDR45Q9Y484 360 aa6.01□□□□□ -1.45
VCAN-203ENST00000343200 ZFYVE16Q7Z3T8 1539 aa6.01□□□□□ -1.45
VCAN-203ENST00000343200 MAGEB17A8MXT2 336 aa6.01□□□□□ -1.45
VCAN-203ENST00000343200 ZNF878C9JN71 531 aa6.01□□□□□ -1.45
VCAN-203ENST00000343200 PRKAB2O43741 272 aa6.01□□□□□ -1.45
VCAN-203ENST00000343200 ERCC1P07992 297 aaPredicted RBP6.01□□□□□ -1.45
VCAN-203ENST00000343200 RPS17P08708 135 aaKnown RBP6.01□□□□□ -1.45
VCAN-203ENST00000343200 KHKP50053 298 aa6.01□□□□□ -1.45
VCAN-203ENST00000343200 SLC2A7Q6PXP3 512 aa6.01□□□□□ -1.45
VCAN-203ENST00000343200 EEPD1Q7L9B9 569 aa6.01□□□□□ -1.45
VCAN-203ENST00000343200 ADGRF2Q8IZF7 708 aa6.01□□□□□ -1.45
VCAN-203ENST00000343200 SYNE4Q8N205 404 aa6.01□□□□□ -1.45
VCAN-203ENST00000343200 IQCF1Q8N6M8 205 aa6.01□□□□□ -1.45
VCAN-203ENST00000343200 PTGR2Q8N8N7 351 aaPredicted RBP6.01□□□□□ -1.45
VCAN-203ENST00000343200 ZDHHC1Q8WTX9 485 aa6.01□□□□□ -1.45
VCAN-203ENST00000343200 MFSD3Q96ES6 412 aa6.01□□□□□ -1.45
VCAN-203ENST00000343200 SLC6A7Q99884 636 aa6.01□□□□□ -1.45
VCAN-203ENST00000343200 ACTRT3Q9BYD9 372 aa6.01□□□□□ -1.45
VCAN-203ENST00000343200 IPPKQ9H8X2 491 aa6.01□□□□□ -1.45
VCAN-203ENST00000343200 TPT1P8Q9HAU6 139 aa6.01□□□□□ -1.45
VCAN-203ENST00000343200 HRH3Q9Y5N1 445 aa6.01□□□□□ -1.45
VCAN-203ENST00000343200 DENND4BO75064 1496 aaPredicted RBP6.01□□□□□ -1.45
VCAN-203ENST00000343200 ARAP3Q8WWN8 1544 aa6.01□□□□□ -1.45
VCAN-203ENST00000343200 PRAF2O60831 178 aa6.01□□□□□ -1.45
VCAN-203ENST00000343200 CLN5O75503 358 aa6.01□□□□□ -1.45
VCAN-203ENST00000343200 PRKCGP05129 697 aa6.01□□□□□ -1.45
VCAN-203ENST00000343200 HCKP08631 526 aa6.01□□□□□ -1.45
VCAN-203ENST00000343200 HSD11B1P28845 292 aa6.01□□□□□ -1.45
VCAN-203ENST00000343200 CDH8P55286 799 aa6.01□□□□□ -1.45
VCAN-203ENST00000343200 ESCO2Q56NI9 601 aa6.01□□□□□ -1.45
VCAN-203ENST00000343200 RETSATQ6NUM9 610 aa6.01□□□□□ -1.45
VCAN-203ENST00000343200 YIPF7Q8N8F6 280 aa6.01□□□□□ -1.45
VCAN-203ENST00000343200 POGLUT1Q8NBL1 392 aa6.01□□□□□ -1.45
VCAN-203ENST00000343200 LYRM2Q9NU23 88 aaPredicted RBP6.01□□□□□ -1.45
VCAN-203ENST00000343200 PLCXD1Q9NUJ7 323 aa6.01□□□□□ -1.45
VCAN-203ENST00000343200 NUBP2Q9Y5Y2 271 aa6.01□□□□□ -1.45
VCAN-203ENST00000343200 TJP1Q07157 1748 aa6.01□□□□□ -1.45
VCAN-203ENST00000343200 KCNU1A8MYU2 1149 aa6.01□□□□□ -1.45
VCAN-203ENST00000343200 SDC3O75056 442 aa6.01□□□□□ -1.45
VCAN-203ENST00000343200 FAM86B2P0C5J1 330 aa6.01□□□□□ -1.45
VCAN-203ENST00000343200 MBL2P11226 248 aaPredicted RBP6.01□□□□□ -1.45
VCAN-203ENST00000343200 MMP8P22894 467 aa6.01□□□□□ -1.45
VCAN-203ENST00000343200 PSMB4P28070 264 aa6.01□□□□□ -1.45
VCAN-203ENST00000343200 ATP5C1P36542 298 aaKnown RBP6.01□□□□□ -1.45
VCAN-203ENST00000343200 GNPDA1P46926 289 aa6.01□□□□□ -1.45
VCAN-203ENST00000343200 STT3AP46977 705 aa6.01□□□□□ -1.45
VCAN-203ENST00000343200 SLC6A9P48067 706 aa6.01□□□□□ -1.45
VCAN-203ENST00000343200 MFSD13AQ14CX5 517 aa6.01□□□□□ -1.45
VCAN-203ENST00000343200 SUPT20HL1Q3ZLR7 823 aa6.01□□□□□ -1.45
VCAN-203ENST00000343200 HIST2H3PS2Q5TEC6 136 aa6.01□□□□□ -1.45
VCAN-203ENST00000343200 CFAP77Q6ZQR2 320 aa6.01□□□□□ -1.45
VCAN-203ENST00000343200 GPAT4Q86UL3 456 aa6.01□□□□□ -1.45
VCAN-203ENST00000343200 GID4Q8IVV7 300 aa6.01□□□□□ -1.45
VCAN-203ENST00000343200 IQCKQ8N0W5 287 aa6.01□□□□□ -1.45
VCAN-203ENST00000343200 TWIST2Q8WVJ9 160 aa6.01□□□□□ -1.45
VCAN-203ENST00000343200 RAB39BQ96DA2 213 aa6.01□□□□□ -1.45
VCAN-203ENST00000343200 LRRC4CQ9HCJ2 640 aa6.01□□□□□ -1.45
VCAN-203ENST00000343200 ERVK13-1Q9NX77 482 aa6.01□□□□□ -1.45
VCAN-203ENST00000343200 ARHGAP20Q9P2F6 1191 aa6.01□□□□□ -1.45
VCAN-203ENST00000343200 TESMINQ9Y4I5 508 aa6.01□□□□□ -1.45
VCAN-203ENST00000343200 MAP4K5Q9Y4K4 846 aa6.01□□□□□ -1.45
VCAN-203ENST00000343200 HMGN1P05114 100 aa6.01□□□□□ -1.45
VCAN-203ENST00000343200 ADH1AP07327 375 aa6.01□□□□□ -1.45
VCAN-203ENST00000343200 DAG1Q14118 895 aa6.01□□□□□ -1.45
VCAN-203ENST00000343200 EPHA10Q5JZY3 1008 aa6.01□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms