RNA–Protein interactions for RNA: ENST00000340611.8

BRAT1-201, Transcript of BRCA1 associated ATM activator 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BRAT1, Length 2,915 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRAT1-201ENST00000340611 SMPD3Q9NY59 655 aaPredicted RBP14.6□□□□□ -0.07
BRAT1-201ENST00000340611 USP22Q9UPT9 525 aa14.6□□□□□ -0.07
BRAT1-201ENST00000340611 LRRC14BA6NHZ5 514 aa14.6□□□□□ -0.07
BRAT1-201ENST00000340611 NCF1BA6NI72 391 aaPredicted RBP14.6□□□□□ -0.07
BRAT1-201ENST00000340611 NCF1CA8MVU1 366 aaPredicted RBP14.6□□□□□ -0.07
BRAT1-201ENST00000340611 E5RI56 91 aa14.6□□□□□ -0.07
BRAT1-201ENST00000340611 CDC7O00311 574 aa14.6□□□□□ -0.07
BRAT1-201ENST00000340611 KLF8O95600 359 aaPredicted RBP14.6□□□□□ -0.07
BRAT1-201ENST00000340611 NCF1P14598 390 aaPredicted RBP14.6□□□□□ -0.07
BRAT1-201ENST00000340611 IL7RP16871 459 aa14.6□□□□□ -0.07
BRAT1-201ENST00000340611 ZNF37AP17032 561 aaPredicted RBP14.6□□□□□ -0.07
BRAT1-201ENST00000340611 ACRV1P26436 265 aa14.6□□□□□ -0.07
BRAT1-201ENST00000340611 TGFBR1P36897 503 aa14.6□□□□□ -0.07
BRAT1-201ENST00000340611 RPS9P46781 194 aaKnown RBP14.6□□□□□ -0.07
BRAT1-201ENST00000340611 HLCSP50747 726 aa14.6□□□□□ -0.07
BRAT1-201ENST00000340611 DNAJB13P59910 316 aa14.6□□□□□ -0.07
BRAT1-201ENST00000340611 CKAP5Q14008 2032 aa14.6□□□□□ -0.07
BRAT1-201ENST00000340611 AASDHQ4L235 1098 aaPredicted RBP14.6□□□□□ -0.07
BRAT1-201ENST00000340611 RABL3Q5HYI8 236 aa14.6□□□□□ -0.07
BRAT1-201ENST00000340611 COLEC12Q5KU26 742 aa14.6□□□□□ -0.07
BRAT1-201ENST00000340611 STEAP3Q658P3 488 aa14.6□□□□□ -0.07
BRAT1-201ENST00000340611 LARP4Q71RC2 724 aaKnown RBP eCLIP14.6□□□□□ -0.07
BRAT1-201ENST00000340611 FAM124AQ86V42 546 aa14.6□□□□□ -0.07
BRAT1-201ENST00000340611 LYSMD2Q8IV50 215 aa14.6□□□□□ -0.07
BRAT1-201ENST00000340611 SYTL1Q8IYJ3 562 aa14.6□□□□□ -0.07
BRAT1-201ENST00000340611 FAM109AQ8N4B1 249 aa14.6□□□□□ -0.07
BRAT1-201ENST00000340611 DEFB123Q8N688 67 aa14.6□□□□□ -0.07
BRAT1-201ENST00000340611 IL17RCQ8NAC3 791 aa14.6□□□□□ -0.07
BRAT1-201ENST00000340611 OR7A2PQ8NGA2 310 aa14.6□□□□□ -0.07
BRAT1-201ENST00000340611 BEX2Q9BXY8 128 aa14.6□□□□□ -0.07
BRAT1-201ENST00000340611 ATP13A2Q9NQ11 1180 aa14.6□□□□□ -0.07
BRAT1-201ENST00000340611 C8orf4Q9NR00 106 aa14.6□□□□□ -0.07
BRAT1-201ENST00000340611 INTS10Q9NVR2 710 aaKnown RBP14.6□□□□□ -0.07
BRAT1-201ENST00000340611 ZNF106Q9H2Y7 1883 aaKnown RBP14.6□□□□□ -0.07
BRAT1-201ENST00000340611 CXorf51AA0A1B0GTR3 108 aa14.59□□□□□ -0.07
BRAT1-201ENST00000340611 KRT87PA6NCN2 255 aa14.59□□□□□ -0.07
BRAT1-201ENST00000340611 TSPAN4O14817 238 aa14.59□□□□□ -0.07
BRAT1-201ENST00000340611 ANGPT2O15123 496 aa14.59□□□□□ -0.07
BRAT1-201ENST00000340611 UQCRC1P31930 480 aa14.59□□□□□ -0.07
BRAT1-201ENST00000340611 DRD3P35462 400 aa14.59□□□□□ -0.07
BRAT1-201ENST00000340611 GRB7Q14451 532 aa14.59□□□□□ -0.07
BRAT1-201ENST00000340611 ACAP2Q15057 778 aa14.59□□□□□ -0.07
BRAT1-201ENST00000340611 OR4D1Q15615 310 aa14.59□□□□□ -0.07
BRAT1-201ENST00000340611 SLX4IPQ5VYV7 408 aa14.59□□□□□ -0.07
BRAT1-201ENST00000340611 GTF2IRD2BQ6EKJ0 949 aa14.59□□□□□ -0.07
BRAT1-201ENST00000340611 PTRHD1Q6GMV3 140 aaKnown RBP14.59□□□□□ -0.07
BRAT1-201ENST00000340611 ZNF773Q6PK81 442 aa14.59□□□□□ -0.07
BRAT1-201ENST00000340611 GTF2IRD2Q86UP8 949 aa14.59□□□□□ -0.07
BRAT1-201ENST00000340611 NXPE1Q8N323 547 aa14.59□□□□□ -0.07
BRAT1-201ENST00000340611 TCAIMQ8N3R3 496 aa14.59□□□□□ -0.07
BRAT1-201ENST00000340611 TRIM63Q969Q1 353 aa14.59□□□□□ -0.07
BRAT1-201ENST00000340611 ESAMQ96AP7 390 aa14.59□□□□□ -0.07
BRAT1-201ENST00000340611 SDCCAG3Q96C92 435 aa14.59□□□□□ -0.07
BRAT1-201ENST00000340611 C19orf60Q96EN9 201 aa14.59□□□□□ -0.07
BRAT1-201ENST00000340611 UBXN10Q96LJ8 280 aa14.59□□□□□ -0.07
BRAT1-201ENST00000340611 TRIM15Q9C019 465 aa14.59□□□□□ -0.07
BRAT1-201ENST00000340611 REXO4Q9GZR2 422 aaKnown RBP14.59□□□□□ -0.07
BRAT1-201ENST00000340611 FAM83DQ9H4H8 585 aa14.59□□□□□ -0.07
BRAT1-201ENST00000340611 FRYLO94915 3013 aa14.59□□□□□ -0.07
BRAT1-201ENST00000340611 OR2AG2A6NM03 316 aa14.59□□□□□ -0.07
BRAT1-201ENST00000340611 AQP12BA6NM10 295 aa14.59□□□□□ -0.07
BRAT1-201ENST00000340611 PTGES3LE9PB15 166 aa14.59□□□□□ -0.07
BRAT1-201ENST00000340611 FXYD1O00168 92 aa14.59□□□□□ -0.07
BRAT1-201ENST00000340611 CPNE3O75131 537 aaKnown RBP14.59□□□□□ -0.07
BRAT1-201ENST00000340611 INMTO95050 263 aa14.59□□□□□ -0.07
BRAT1-201ENST00000340611 LTA4HP09960 611 aaKnown RBP14.59□□□□□ -0.07
BRAT1-201ENST00000340611 RRM2P31350 389 aa14.59□□□□□ -0.07
BRAT1-201ENST00000340611 AKT1P31749 480 aa14.59□□□□□ -0.07
BRAT1-201ENST00000340611 ILF2Q12905 390 aaKnown RBP14.59□□□□□ -0.07
BRAT1-201ENST00000340611 BROXQ5VW32 411 aa14.59□□□□□ -0.07
BRAT1-201ENST00000340611 IDO2Q6ZQW0 420 aa14.59□□□□□ -0.07
BRAT1-201ENST00000340611 SPRED1Q7Z699 444 aa14.59□□□□□ -0.07
BRAT1-201ENST00000340611 AQP12AQ8IXF9 295 aa14.59□□□□□ -0.07
BRAT1-201ENST00000340611 TRPV3Q8NET8 790 aa14.59□□□□□ -0.07
BRAT1-201ENST00000340611 GANCQ8TET4 914 aa14.59□□□□□ -0.07
BRAT1-201ENST00000340611 MUS81Q96NY9 551 aa14.59□□□□□ -0.07
BRAT1-201ENST00000340611 P2RY12Q9H244 342 aa14.59□□□□□ -0.07
BRAT1-201ENST00000340611 GSTO2Q9H4Y5 243 aa14.59□□□□□ -0.07
BRAT1-201ENST00000340611 DYRK4Q9NR20 520 aa14.59□□□□□ -0.07
BRAT1-201ENST00000340611 CAMSAP3Q9P1Y5 1249 aaPredicted RBP14.59□□□□□ -0.07
BRAT1-201ENST00000340611 BAG5Q9UL15 447 aa14.59□□□□□ -0.07
BRAT1-201ENST00000340611 SHISA7A6NL88 538 aa14.59□□□□□ -0.07
BRAT1-201ENST00000340611 PRMT5O14744 637 aaPredicted RBP14.59□□□□□ -0.07
BRAT1-201ENST00000340611 SNX2O60749 519 aa14.59□□□□□ -0.07
BRAT1-201ENST00000340611 CYP2A6P11509 494 aaPredicted RBP14.59□□□□□ -0.07
BRAT1-201ENST00000340611 SLC6A2P23975 617 aa14.59□□□□□ -0.07
BRAT1-201ENST00000340611 ITGB7P26010 798 aa14.59□□□□□ -0.07
BRAT1-201ENST00000340611 CASP2P42575 452 aa14.59□□□□□ -0.07
BRAT1-201ENST00000340611 UGT3A2Q3SY77 523 aa14.59□□□□□ -0.07
BRAT1-201ENST00000340611 PYCR3Q53H96 274 aa14.59□□□□□ -0.07
BRAT1-201ENST00000340611 GPRC6AQ5T6X5 926 aa14.59□□□□□ -0.07
BRAT1-201ENST00000340611 HACD2Q6Y1H2 254 aa14.59□□□□□ -0.07
BRAT1-201ENST00000340611 SLC16A12Q6ZSM3 486 aa14.59□□□□□ -0.07
BRAT1-201ENST00000340611 ISCA2Q86U28 154 aa14.59□□□□□ -0.07
BRAT1-201ENST00000340611 SFRP1Q8N474 314 aa14.59□□□□□ -0.07
BRAT1-201ENST00000340611 CD200R1Q8TD46 325 aa14.59□□□□□ -0.07
BRAT1-201ENST00000340611 ROPN1LQ96C74 230 aa14.59□□□□□ -0.07
BRAT1-201ENST00000340611 MYOCQ99972 504 aa14.59□□□□□ -0.07
BRAT1-201ENST00000340611 TUBA1CQ9BQE3 449 aa14.59□□□□□ -0.07
BRAT1-201ENST00000340611 TAS2R13Q9NYV9 303 aa14.59□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms