RNA–Protein interactions for RNA: ENST00000339950.4

USP1-201, Transcript of ubiquitin specific peptidase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP1, Length 3,996 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP1-201ENST00000339950 PHYKPLQ8IUZ5 450 aa11.55□□□□□ -0.56
USP1-201ENST00000339950 MMP21Q8N119 569 aa11.55□□□□□ -0.56
USP1-201ENST00000339950 LGI4Q8N135 537 aa11.55□□□□□ -0.56
USP1-201ENST00000339950 CLP1Q92989 425 aaKnown RBP11.55□□□□□ -0.56
USP1-201ENST00000339950 IGSF21Q96ID5 467 aa11.55□□□□□ -0.56
USP1-201ENST00000339950 CDK5RAP1Q96SZ6 601 aaKnown RBP11.55□□□□□ -0.56
USP1-201ENST00000339950 XKR8Q9H6D3 395 aa11.55□□□□□ -0.56
USP1-201ENST00000339950 SNTG1Q9NSN8 517 aa11.55□□□□□ -0.56
USP1-201ENST00000339950 SAMD4AQ9UPU9 718 aaKnown RBP11.55□□□□□ -0.56
USP1-201ENST00000339950 CABIN1Q9Y6J0 2220 aa11.55□□□□□ -0.56
USP1-201ENST00000339950 FUOMA2VDF0 154 aa11.55□□□□□ -0.56
USP1-201ENST00000339950 CACNG3O60359 315 aa11.55□□□□□ -0.56
USP1-201ENST00000339950 MMP20O60882 483 aa11.55□□□□□ -0.56
USP1-201ENST00000339950 MED26O95402 600 aa11.55□□□□□ -0.56
USP1-201ENST00000339950 ALPLP05186 524 aa11.55□□□□□ -0.56
USP1-201ENST00000339950 ACRV1P26436 265 aa11.55□□□□□ -0.56
USP1-201ENST00000339950 KDELR2P33947 212 aa11.55□□□□□ -0.56
USP1-201ENST00000339950 CSNK1DP48730 415 aa11.55□□□□□ -0.56
USP1-201ENST00000339950 AP1S1P61966 158 aa11.55□□□□□ -0.56
USP1-201ENST00000339950 DEFB103AP81534 67 aa11.55□□□□□ -0.56
USP1-201ENST00000339950 CREMQ03060 361 aa11.55□□□□□ -0.56
USP1-201ENST00000339950 MLLT1Q03111 559 aaPredicted RBP11.55□□□□□ -0.56
USP1-201ENST00000339950 EMX1Q04741 257 aaPredicted RBP11.55□□□□□ -0.56
USP1-201ENST00000339950 DSC1Q08554 894 aa11.55□□□□□ -0.56
USP1-201ENST00000339950 LEXMQ3ZCV2 418 aa11.55□□□□□ -0.56
USP1-201ENST00000339950 TJAP1Q5JTD0 557 aa11.55□□□□□ -0.56
USP1-201ENST00000339950 BCDIN3DQ7Z5W3 292 aaKnown RBP11.55□□□□□ -0.56
USP1-201ENST00000339950 DSG4Q86SJ6 1040 aa11.55□□□□□ -0.56
USP1-201ENST00000339950 ZBTB20Q9HC78 741 aaPredicted RBP11.55□□□□□ -0.56
USP1-201ENST00000339950 VNN3Q9NY84 501 aa11.55□□□□□ -0.56
USP1-201ENST00000339950 INSL5Q9Y5Q6 135 aa11.55□□□□□ -0.56
USP1-201ENST00000339950 WDR81Q562E7 1941 aa11.55□□□□□ -0.56
USP1-201ENST00000339950 A6NL46 340 aa11.55□□□□□ -0.56
USP1-201ENST00000339950 CSF2P04141 144 aa11.55□□□□□ -0.56
USP1-201ENST00000339950 EIF2S1P05198 315 aaKnown RBP11.55□□□□□ -0.56
USP1-201ENST00000339950 S100A1P23297 94 aa11.55□□□□□ -0.56
USP1-201ENST00000339950 HOXC13P31276 330 aa11.55□□□□□ -0.56
USP1-201ENST00000339950 HOXD12P35452 270 aa11.55□□□□□ -0.56
USP1-201ENST00000339950 ATP4BP51164 291 aa11.55□□□□□ -0.56
USP1-201ENST00000339950 EMP3P54852 163 aa11.55□□□□□ -0.56
USP1-201ENST00000339950 MGAT3Q09327 533 aa11.55□□□□□ -0.56
USP1-201ENST00000339950 ZNF846Q147U1 533 aa11.55□□□□□ -0.56
USP1-201ENST00000339950 GRIN2CQ14957 1233 aa11.55□□□□□ -0.56
USP1-201ENST00000339950 FAM214AQ32MH5 1076 aa11.55□□□□□ -0.56
USP1-201ENST00000339950 RPS26P11Q5JNZ5 115 aaPredicted RBP11.55□□□□□ -0.56
USP1-201ENST00000339950 HACD2Q6Y1H2 254 aa11.55□□□□□ -0.56
USP1-201ENST00000339950 ZFP41Q8N8Y5 198 aa11.55□□□□□ -0.56
USP1-201ENST00000339950 TERB1Q8NA31 727 aa11.55□□□□□ -0.56
USP1-201ENST00000339950 TBC1D15Q8TC07 691 aa11.55□□□□□ -0.56
USP1-201ENST00000339950 C17orf50Q8WW18 174 aa11.55□□□□□ -0.56
USP1-201ENST00000339950 CASD1Q96PB1 797 aa11.55□□□□□ -0.56
USP1-201ENST00000339950 TTTY10Q9BZA0 68 aa11.55□□□□□ -0.56
USP1-201ENST00000339950 ACTL8Q9H568 366 aa11.55□□□□□ -0.56
USP1-201ENST00000339950 ZDHHC3Q9NYG2 299 aa11.55□□□□□ -0.56
USP1-201ENST00000339950 CENPXA8MT69 81 aa11.54□□□□□ -0.56
USP1-201ENST00000339950 CCRL2O00421 344 aa11.54□□□□□ -0.56
USP1-201ENST00000339950 FUCA1P04066 466 aa11.54□□□□□ -0.56
USP1-201ENST00000339950 CRHBPP24387 322 aa11.54□□□□□ -0.56
USP1-201ENST00000339950 DNAJB1P25685 340 aa11.54□□□□□ -0.56
USP1-201ENST00000339950 MRPL28Q13084 256 aaKnown RBP11.54□□□□□ -0.56
USP1-201ENST00000339950 SKIV2LQ15477 1246 aaKnown RBP11.54□□□□□ -0.56
USP1-201ENST00000339950 TEAD2Q15562 447 aa11.54□□□□□ -0.56
USP1-201ENST00000339950 TIGD6Q17RP2 521 aa11.54□□□□□ -0.56
USP1-201ENST00000339950 TYSND1Q2T9J0 566 aa11.54□□□□□ -0.56
USP1-201ENST00000339950 SHFQ7M4L6 423 aa11.54□□□□□ -0.56
USP1-201ENST00000339950 ZSWIM9Q86XI8 627 aa11.54□□□□□ -0.56
USP1-201ENST00000339950 TEX26Q8N6G2 289 aa11.54□□□□□ -0.56
USP1-201ENST00000339950 CAPNS2Q96L46 248 aa11.54□□□□□ -0.56
USP1-201ENST00000339950 ZNF641Q96N77 438 aaPredicted RBP11.54□□□□□ -0.56
USP1-201ENST00000339950 PKMYT1Q99640 499 aa11.54□□□□□ -0.56
USP1-201ENST00000339950 LHX3Q9UBR4 397 aa11.54□□□□□ -0.56
USP1-201ENST00000339950 RPS6KA6Q9UK32 745 aa11.54□□□□□ -0.56
USP1-201ENST00000339950 WDR37Q9Y2I8 494 aa11.54□□□□□ -0.56
USP1-201ENST00000339950 SLC45A1Q9Y2W3 748 aa11.54□□□□□ -0.56
USP1-201ENST00000339950 Q9Y3F1 56 aa11.54□□□□□ -0.56
USP1-201ENST00000339950 HOXA2O43364 376 aa11.54□□□□□ -0.56
USP1-201ENST00000339950 ATP1B2P14415 290 aaPredicted RBP11.54□□□□□ -0.56
USP1-201ENST00000339950 PORP16435 677 aaPredicted RBP11.54□□□□□ -0.56
USP1-201ENST00000339950 ZNF12P17014 697 aa11.54□□□□□ -0.56
USP1-201ENST00000339950 MAGEA11P43364 429 aa11.54□□□□□ -0.56
USP1-201ENST00000339950 PHC1P78364 1004 aa11.54□□□□□ -0.56
USP1-201ENST00000339950 CAP1Q01518 475 aa11.54□□□□□ -0.56
USP1-201ENST00000339950 RING1Q06587 406 aa11.54□□□□□ -0.56
USP1-201ENST00000339950 CDK5R2Q13319 367 aa11.54□□□□□ -0.56
USP1-201ENST00000339950 BORAQ6PGQ7 559 aa11.54□□□□□ -0.56
USP1-201ENST00000339950 PRR23CQ6ZRP0 262 aa11.54□□□□□ -0.56
USP1-201ENST00000339950 WDR53Q7Z5U6 358 aaPredicted RBP11.54□□□□□ -0.56
USP1-201ENST00000339950 MFSD2AQ8NA29 543 aa11.54□□□□□ -0.56
USP1-201ENST00000339950 OR10G2Q8NGC3 310 aa11.54□□□□□ -0.56
USP1-201ENST00000339950 SLC35A5Q9BS91 424 aa11.54□□□□□ -0.56
USP1-201ENST00000339950 EHD1Q9H4M9 534 aa11.54□□□□□ -0.56
USP1-201ENST00000339950 FAIMQ9NVQ4 179 aa11.54□□□□□ -0.56
USP1-201ENST00000339950 TVP23BQ9NYZ1 205 aa11.54□□□□□ -0.56
USP1-201ENST00000339950 SRRDQ9UH36 339 aa11.54□□□□□ -0.56
USP1-201ENST00000339950 PTBP2Q9UKA9 531 aaKnown RBP11.54□□□□□ -0.56
USP1-201ENST00000339950 HTTP42858 3142 aa11.54□□□□□ -0.56
USP1-201ENST00000339950 FEZF1A0PJY2 475 aa11.54□□□□□ -0.56
USP1-201ENST00000339950 WASHC1A8K0Z3 465 aa11.54□□□□□ -0.56
USP1-201ENST00000339950 H0YJX3 145 aa11.54□□□□□ -0.56
USP1-201ENST00000339950 OXSR1O95747 527 aaPredicted RBP11.54□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms