RNA–Protein interactions for RNA: ENST00000330045.11

BRCC3-201, Transcript of BRCA1/BRCA2-containing complex subunit 3, humanhuman

TSL 1 (best) BASIC

Gene BRCC3, Length 2,496 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCC3-201ENST00000330045 GRK3P35626 688 aa14.85□□□□□ -0.03
BRCC3-201ENST00000330045 IFITM3Q01628 133 aa14.85□□□□□ -0.03
BRCC3-201ENST00000330045 XKR6Q5GH73 641 aa14.85□□□□□ -0.03
BRCC3-201ENST00000330045 TMEM236Q5W0B7 351 aa14.85□□□□□ -0.03
BRCC3-201ENST00000330045 ZDHHC20Q5W0Z9 365 aa14.85□□□□□ -0.03
BRCC3-201ENST00000330045 SNX29P2Q8IUI4 249 aa14.85□□□□□ -0.03
BRCC3-201ENST00000330045 SYNPOQ8N3V7 929 aa14.85□□□□□ -0.03
BRCC3-201ENST00000330045 MFSD4AQ8N468 514 aa14.85□□□□□ -0.03
BRCC3-201ENST00000330045 CPA6Q8N4T0 437 aa14.85□□□□□ -0.03
BRCC3-201ENST00000330045 OR6Q1Q8NGQ2 317 aa14.85□□□□□ -0.03
BRCC3-201ENST00000330045 IPCEF1Q8WWN9 437 aaPredicted RBP14.85□□□□□ -0.03
BRCC3-201ENST00000330045 LGALS12Q96DT0 336 aa14.85□□□□□ -0.03
BRCC3-201ENST00000330045 TMEM169Q96HH4 297 aa14.85□□□□□ -0.03
BRCC3-201ENST00000330045 MTERF1Q99551 399 aaKnown RBP14.85□□□□□ -0.03
BRCC3-201ENST00000330045 PITX2Q99697 317 aa14.85□□□□□ -0.03
BRCC3-201ENST00000330045 SH3BP1Q9Y3L3 701 aa14.85□□□□□ -0.03
BRCC3-201ENST00000330045 INSL5Q9Y5Q6 135 aa14.85□□□□□ -0.03
BRCC3-201ENST00000330045 LTBP2Q14767 1821 aa14.85□□□□□ -0.03
BRCC3-201ENST00000330045 REV3LO60673 3130 aa14.84□□□□□ -0.03
BRCC3-201ENST00000330045 UGDHO60701 494 aa14.84□□□□□ -0.03
BRCC3-201ENST00000330045 MTX2O75431 263 aa14.84□□□□□ -0.03
BRCC3-201ENST00000330045 WBP4O75554 376 aaKnown RBP14.84□□□□□ -0.03
BRCC3-201ENST00000330045 C9P02748 559 aa14.84□□□□□ -0.03
BRCC3-201ENST00000330045 LAMP1P11279 417 aa14.84□□□□□ -0.03
BRCC3-201ENST00000330045 EFNA1P20827 205 aaPredicted RBP14.84□□□□□ -0.03
BRCC3-201ENST00000330045 CREMQ03060 361 aa14.84□□□□□ -0.03
BRCC3-201ENST00000330045 ZNF33BQ06732 778 aa14.84□□□□□ -0.03
BRCC3-201ENST00000330045 CAMK2GQ13555 558 aaPredicted RBP14.84□□□□□ -0.03
BRCC3-201ENST00000330045 DDX39BQ13838 428 aaKnown RBP14.84□□□□□ -0.03
BRCC3-201ENST00000330045 SF1Q15637 639 aaKnown RBP14.84□□□□□ -0.03
BRCC3-201ENST00000330045 HIST2H2ACQ16777 129 aaPredicted RBP14.84□□□□□ -0.03
BRCC3-201ENST00000330045 LRRC73Q5JTD7 316 aa14.84□□□□□ -0.03
BRCC3-201ENST00000330045 HTR3DQ70Z44 454 aa14.84□□□□□ -0.03
BRCC3-201ENST00000330045 CPXM2Q8N436 756 aa14.84□□□□□ -0.03
BRCC3-201ENST00000330045 MINDY2Q8NBR6 621 aa14.84□□□□□ -0.03
BRCC3-201ENST00000330045 WDR20Q8TBZ3 569 aa14.84□□□□□ -0.03
BRCC3-201ENST00000330045 PHF10Q8WUB8 498 aaKnown RBP14.84□□□□□ -0.03
BRCC3-201ENST00000330045 ZNF558Q96NG5 402 aa14.84□□□□□ -0.03
BRCC3-201ENST00000330045 ZDHHC6Q9H6R6 413 aa14.84□□□□□ -0.03
BRCC3-201ENST00000330045 BRD9Q9H8M2 597 aa14.84□□□□□ -0.03
BRCC3-201ENST00000330045 MRPL17Q9NRX2 175 aaKnown RBP14.84□□□□□ -0.03
BRCC3-201ENST00000330045 ATAD3AQ9NVI7 634 aa14.84□□□□□ -0.03
BRCC3-201ENST00000330045 CXXC1Q9P0U4 656 aaPredicted RBP14.84□□□□□ -0.03
BRCC3-201ENST00000330045 CFAP97Q9P2B7 532 aa14.84□□□□□ -0.03
BRCC3-201ENST00000330045 KPNA5O15131 536 aa14.84□□□□□ -0.03
BRCC3-201ENST00000330045 PCDHGA12O60330 932 aa14.84□□□□□ -0.03
BRCC3-201ENST00000330045 CKMP06732 381 aa14.84□□□□□ -0.03
BRCC3-201ENST00000330045 BMP4P12644 408 aa14.84□□□□□ -0.03
BRCC3-201ENST00000330045 CYP4F8P98187 520 aa14.84□□□□□ -0.03
BRCC3-201ENST00000330045 ACSM2AQ08AH3 577 aa14.84□□□□□ -0.03
BRCC3-201ENST00000330045 RAB33AQ14088 237 aa14.84□□□□□ -0.03
BRCC3-201ENST00000330045 IQCCQ4KMZ1 466 aa14.84□□□□□ -0.03
BRCC3-201ENST00000330045 ACSM2BQ68CK6 577 aa14.84□□□□□ -0.03
BRCC3-201ENST00000330045 C22orf39Q6P5X5 142 aa14.84□□□□□ -0.03
BRCC3-201ENST00000330045 FAM43BQ6ZT52 329 aaPredicted RBP14.84□□□□□ -0.03
BRCC3-201ENST00000330045 AHSA2Q719I0 299 aa14.84□□□□□ -0.03
BRCC3-201ENST00000330045 ELMO1Q92556 727 aa14.84□□□□□ -0.03
BRCC3-201ENST00000330045 SH3KBP1Q96B97 665 aa14.84□□□□□ -0.03
BRCC3-201ENST00000330045 ITPKCQ96DU7 683 aa14.84□□□□□ -0.03
BRCC3-201ENST00000330045 C7orf34Q96L11 122 aa14.84□□□□□ -0.03
BRCC3-201ENST00000330045 DUSP26Q9BV47 211 aa14.84□□□□□ -0.03
BRCC3-201ENST00000330045 SPATA6Q9NWH7 488 aaPredicted RBP14.84□□□□□ -0.03
BRCC3-201ENST00000330045 B4GALT6Q9UBX8 382 aa14.84□□□□□ -0.03
BRCC3-201ENST00000330045 FZD4Q9ULV1 537 aa14.84□□□□□ -0.03
BRCC3-201ENST00000330045 BTBD3Q9Y2F9 522 aa14.84□□□□□ -0.03
BRCC3-201ENST00000330045 ABHD14A-ACY1A0A1B0GW23 586 aa14.83□□□□□ -0.04
BRCC3-201ENST00000330045 OR2A25A4D2G3 310 aa14.83□□□□□ -0.04
BRCC3-201ENST00000330045 ZBBXA8MT70 800 aa14.83□□□□□ -0.04
BRCC3-201ENST00000330045 NRG2O14511 850 aaPredicted RBP14.83□□□□□ -0.04
BRCC3-201ENST00000330045 DPM1O60762 260 aa14.83□□□□□ -0.04
BRCC3-201ENST00000330045 LCKP06239 509 aa14.83□□□□□ -0.04
BRCC3-201ENST00000330045 CD36P16671 472 aa14.83□□□□□ -0.04
BRCC3-201ENST00000330045 CA8P35219 290 aa14.83□□□□□ -0.04
BRCC3-201ENST00000330045 C21orf58P58505 322 aa14.83□□□□□ -0.04
BRCC3-201ENST00000330045 SPRED2Q7Z698 418 aa14.83□□□□□ -0.04
BRCC3-201ENST00000330045 ENTHD1Q8IYW4 607 aa14.83□□□□□ -0.04
BRCC3-201ENST00000330045 STARD8Q92502 1023 aa14.83□□□□□ -0.04
BRCC3-201ENST00000330045 RPL3LQ92901 407 aaKnown RBP14.83□□□□□ -0.04
BRCC3-201ENST00000330045 EPYCQ99645 322 aa14.83□□□□□ -0.04
BRCC3-201ENST00000330045 MYO1DO94832 1006 aa14.83□□□□□ -0.04
BRCC3-201ENST00000330045 NUDT7P0C024 238 aa14.83□□□□□ -0.04
BRCC3-201ENST00000330045 GABRR2P28476 465 aa14.83□□□□□ -0.04
BRCC3-201ENST00000330045 CSNK2BP67870 215 aa14.83□□□□□ -0.04
BRCC3-201ENST00000330045 KCNJ10P78508 379 aa14.83□□□□□ -0.04
BRCC3-201ENST00000330045 FADDQ13158 208 aa14.83□□□□□ -0.04
BRCC3-201ENST00000330045 KCNC3Q14003 757 aa14.83□□□□□ -0.04
BRCC3-201ENST00000330045 DOC2AQ14183 400 aa14.83□□□□□ -0.04
BRCC3-201ENST00000330045 NEK10Q6ZWH5 1172 aa14.83□□□□□ -0.04
BRCC3-201ENST00000330045 THOC6Q86W42 341 aaKnown RBP14.83□□□□□ -0.04
BRCC3-201ENST00000330045 PLD3Q8IV08 490 aa14.83□□□□□ -0.04
BRCC3-201ENST00000330045 TCEAL8Q8IYN2 117 aa14.83□□□□□ -0.04
BRCC3-201ENST00000330045 APH1BQ8WW43 257 aa14.83□□□□□ -0.04
BRCC3-201ENST00000330045 HRASLS5Q96KN8 279 aa14.83□□□□□ -0.04
BRCC3-201ENST00000330045 SIGLEC11Q96RL6 698 aa14.83□□□□□ -0.04
BRCC3-201ENST00000330045 YME1L1Q96TA2 773 aa14.83□□□□□ -0.04
BRCC3-201ENST00000330045 SPATA9Q9BWV2 254 aa14.83□□□□□ -0.04
BRCC3-201ENST00000330045 BTBD2Q9BX70 525 aa14.83□□□□□ -0.04
BRCC3-201ENST00000330045 CPEB1Q9BZB8 566 aaKnown RBP14.83□□□□□ -0.04
BRCC3-201ENST00000330045 EPS8L2Q9H6S3 715 aa14.83□□□□□ -0.04
BRCC3-201ENST00000330045 RUBCNLQ9H714 662 aa14.83□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 50.9 ms