RNA–Protein interactions for RNA: ENST00000327154.10

RPAIN-201, Transcript of RPA interacting protein, humanhuman

TSL 2 BASIC

Gene RPAIN, Length 815 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-201ENST00000327154 ARG2P78540 354 aa13.38□□□□□ -0.27
RPAIN-201ENST00000327154 NAE1Q13564 534 aa13.38□□□□□ -0.27
RPAIN-201ENST00000327154 BBS9Q3SYG4 887 aa13.38□□□□□ -0.27
RPAIN-201ENST00000327154 RBM20Q5T481 1227 aaKnown RBP13.38□□□□□ -0.27
RPAIN-201ENST00000327154 LRRC8EQ6NSJ5 796 aa13.38□□□□□ -0.27
RPAIN-201ENST00000327154 AGTRAPQ6RW13 159 aa13.38□□□□□ -0.27
RPAIN-201ENST00000327154 TMEM205Q6UW68 189 aa13.38□□□□□ -0.27
RPAIN-201ENST00000327154 PRSS41Q7RTY9 318 aa13.38□□□□□ -0.27
RPAIN-201ENST00000327154 MAMDC2Q7Z304 686 aaPredicted RBP13.38□□□□□ -0.27
RPAIN-201ENST00000327154 SHISA5Q8N114 240 aa13.38□□□□□ -0.27
RPAIN-201ENST00000327154 GABPB2Q8TAK5 448 aaPredicted RBP13.38□□□□□ -0.27
RPAIN-201ENST00000327154 ZNF700Q9H0M5 742 aa13.38□□□□□ -0.27
RPAIN-201ENST00000327154 SH2B3Q9UQQ2 575 aa13.38□□□□□ -0.27
RPAIN-201ENST00000327154 FEZF1A0PJY2 475 aa13.37□□□□□ -0.27
RPAIN-201ENST00000327154 H0YIG0 161 aa13.37□□□□□ -0.27
RPAIN-201ENST00000327154 PCDH17O14917 1159 aa13.37□□□□□ -0.27
RPAIN-201ENST00000327154 LCMT2O60294 686 aaKnown RBP13.37□□□□□ -0.27
RPAIN-201ENST00000327154 F10P00742 488 aa13.37□□□□□ -0.27
RPAIN-201ENST00000327154 ICAM2P13598 275 aa13.37□□□□□ -0.27
RPAIN-201ENST00000327154 FDXRP22570 491 aa13.37□□□□□ -0.27
RPAIN-201ENST00000327154 COL8A1P27658 744 aa13.37□□□□□ -0.27
RPAIN-201ENST00000327154 SOX11P35716 441 aa13.37□□□□□ -0.27
RPAIN-201ENST00000327154 PCOLCEQ15113 449 aa13.37□□□□□ -0.27
RPAIN-201ENST00000327154 PHKG1Q16816 387 aa13.37□□□□□ -0.27
RPAIN-201ENST00000327154 SPANXN3Q5MJ09 141 aa13.37□□□□□ -0.27
RPAIN-201ENST00000327154 HP1BP3Q5SSJ5 553 aaPredicted RBP13.37□□□□□ -0.27
RPAIN-201ENST00000327154 RPUSD3Q6P087 351 aaKnown RBP13.37□□□□□ -0.27
RPAIN-201ENST00000327154 FAM180AQ6UWF9 173 aa13.37□□□□□ -0.27
RPAIN-201ENST00000327154 RIPOR1Q6ZS17 1223 aa13.37□□□□□ -0.27
RPAIN-201ENST00000327154 PCGF5Q86SE9 256 aa13.37□□□□□ -0.27
RPAIN-201ENST00000327154 C17orf64Q86WR6 236 aa13.37□□□□□ -0.27
RPAIN-201ENST00000327154 MYO1HQ8N1T3 1032 aa13.37□□□□□ -0.27
RPAIN-201ENST00000327154 METTL21AQ8WXB1 218 aa13.37□□□□□ -0.27
RPAIN-201ENST00000327154 HAS2Q92819 552 aa13.37□□□□□ -0.27
RPAIN-201ENST00000327154 THAP11Q96EK4 314 aa13.37□□□□□ -0.27
RPAIN-201ENST00000327154 LINGO1Q96FE5 620 aa13.37□□□□□ -0.27
RPAIN-201ENST00000327154 CYTH2Q99418 400 aa13.37□□□□□ -0.27
RPAIN-201ENST00000327154 VN1R1Q9GZP7 353 aa13.37□□□□□ -0.27
RPAIN-201ENST00000327154 PPANQ9NQ55 473 aaKnown RBP13.37□□□□□ -0.27
RPAIN-201ENST00000327154 RIC8BQ9NVN3 520 aa13.37□□□□□ -0.27
RPAIN-201ENST00000327154 SLC17A6Q9P2U8 582 aa13.37□□□□□ -0.27
RPAIN-201ENST00000327154 RNF14Q9UBS8 474 aa13.37□□□□□ -0.27
RPAIN-201ENST00000327154 OSGIN2Q9Y236 505 aa13.37□□□□□ -0.27
RPAIN-201ENST00000327154 PCM1Q15154 2024 aa13.36□□□□□ -0.27
RPAIN-201ENST00000327154 IGHV3-20A0A0C4DH32 117 aa13.36□□□□□ -0.27
RPAIN-201ENST00000327154 OR2W5A6NFC9 320 aa13.36□□□□□ -0.27
RPAIN-201ENST00000327154 CCDC188H7C350 402 aa13.36□□□□□ -0.27
RPAIN-201ENST00000327154 SGK494L7N484 410 aa13.36□□□□□ -0.27
RPAIN-201ENST00000327154 E2F3O00716 465 aa13.36□□□□□ -0.27
RPAIN-201ENST00000327154 SLC16A5O15375 505 aa13.36□□□□□ -0.27
RPAIN-201ENST00000327154 NSA2O95478 260 aaKnown RBP13.36□□□□□ -0.27
RPAIN-201ENST00000327154 UQCRHP07919 91 aa13.36□□□□□ -0.27
RPAIN-201ENST00000327154 HIST1H2AGP0C0S8 130 aaPredicted RBP13.36□□□□□ -0.27
RPAIN-201ENST00000327154 C8orf89P0DMQ9 161 aa13.36□□□□□ -0.27
RPAIN-201ENST00000327154 ITGAMP11215 1152 aa13.36□□□□□ -0.27
RPAIN-201ENST00000327154 CDH1P12830 882 aa13.36□□□□□ -0.27
RPAIN-201ENST00000327154 EDN3P14138 238 aa13.36□□□□□ -0.27
RPAIN-201ENST00000327154 NPPBP16860 134 aa13.36□□□□□ -0.27
RPAIN-201ENST00000327154 IL1RNP18510 177 aa13.36□□□□□ -0.27
RPAIN-201ENST00000327154 HIST1H2ADP20671 130 aa13.36□□□□□ -0.27
RPAIN-201ENST00000327154 IVDP26440 423 aa13.36□□□□□ -0.27
RPAIN-201ENST00000327154 BCL6P41182 706 aa13.36□□□□□ -0.27
RPAIN-201ENST00000327154 TNFSF10P50591 281 aa13.36□□□□□ -0.27
RPAIN-201ENST00000327154 PGGT1BP53609 377 aa13.36□□□□□ -0.27
RPAIN-201ENST00000327154 IL2P60568 153 aa13.36□□□□□ -0.27
RPAIN-201ENST00000327154 DR1Q01658 176 aa13.36□□□□□ -0.27
RPAIN-201ENST00000327154 SP140Q13342 867 aa13.36□□□□□ -0.27
RPAIN-201ENST00000327154 TEDDM1Q5T9Z0 273 aa13.36□□□□□ -0.27
RPAIN-201ENST00000327154 MFSD4BQ5TF39 518 aa13.36□□□□□ -0.27
RPAIN-201ENST00000327154 TMEM214Q6NUQ4 689 aaKnown RBP13.36□□□□□ -0.27
RPAIN-201ENST00000327154 KIAA0408Q6ZU52 694 aa13.36□□□□□ -0.27
RPAIN-201ENST00000327154 CNTN4Q8IWV2 1026 aa13.36□□□□□ -0.27
RPAIN-201ENST00000327154 KCT2Q8NC54 265 aa13.36□□□□□ -0.27
RPAIN-201ENST00000327154 CAMKVQ8NCB2 501 aa13.36□□□□□ -0.27
RPAIN-201ENST00000327154 OR51Q1Q8NH59 317 aa13.36□□□□□ -0.27
RPAIN-201ENST00000327154 SLC13A3Q8WWT9 602 aa13.36□□□□□ -0.27
RPAIN-201ENST00000327154 ZNF592Q92610 1267 aa13.36□□□□□ -0.27
RPAIN-201ENST00000327154 TM4SF19Q96DZ7 209 aa13.36□□□□□ -0.27
RPAIN-201ENST00000327154 CERS2Q96G23 380 aa13.36□□□□□ -0.27
RPAIN-201ENST00000327154 HIST1H2AHQ96KK5 128 aa13.36□□□□□ -0.27
RPAIN-201ENST00000327154 IMMP1LQ96LU5 166 aa13.36□□□□□ -0.27
RPAIN-201ENST00000327154 MAGEB10Q96LZ2 347 aaPredicted RBP13.36□□□□□ -0.27
RPAIN-201ENST00000327154 PWWP2AQ96N64 755 aa13.36□□□□□ -0.27
RPAIN-201ENST00000327154 HIST1H2AJQ99878 128 aa13.36□□□□□ -0.27
RPAIN-201ENST00000327154 NAT9Q9BTE0 207 aa13.36□□□□□ -0.27
RPAIN-201ENST00000327154 H2AFJQ9BTM1 129 aa13.36□□□□□ -0.27
RPAIN-201ENST00000327154 SGPP1Q9BX95 441 aa13.36□□□□□ -0.27
RPAIN-201ENST00000327154 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP13.36□□□□□ -0.27
RPAIN-201ENST00000327154 PLAC1Q9HBJ0 212 aa13.36□□□□□ -0.27
RPAIN-201ENST00000327154 HCN3Q9P1Z3 774 aa13.36□□□□□ -0.27
RPAIN-201ENST00000327154 DOCK10Q96BY6 2186 aa13.36□□□□□ -0.27
RPAIN-201ENST00000327154 CNTRLQ7Z7A1 2325 aa13.35□□□□□ -0.27
RPAIN-201ENST00000327154 MDC1Q14676 2089 aaKnown RBP13.35□□□□□ -0.27
RPAIN-201ENST00000327154 TRAV17A0A0B4J275 112 aa13.35□□□□□ -0.27
RPAIN-201ENST00000327154 LRRTM2O43300 516 aa13.35□□□□□ -0.27
RPAIN-201ENST00000327154 SEC24DO94855 1032 aaPredicted RBP13.35□□□□□ -0.27
RPAIN-201ENST00000327154 TSPAN12O95859 305 aa13.35□□□□□ -0.27
RPAIN-201ENST00000327154 WDPCPO95876 746 aa13.35□□□□□ -0.27
RPAIN-201ENST00000327154 CCND1P24385 295 aa13.35□□□□□ -0.27
RPAIN-201ENST00000327154 GRK3P35626 688 aa13.35□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms