RNA–Protein interactions for RNA: ENST00000321897.9

VARS2-201, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 1 (best) BASIC

Gene VARS2, Length 4,073 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-201ENST00000321897 ZBTB20Q9HC78 741 aaPredicted RBP14.8□□□□□ -0.04
VARS2-201ENST00000321897 PHIPQ8WWQ0 1821 aa14.79□□□□□ -0.04
VARS2-201ENST00000321897 GLOD5A6NK44 160 aa14.79□□□□□ -0.04
VARS2-201ENST00000321897 M0QX08 132 aa14.79□□□□□ -0.04
VARS2-201ENST00000321897 CAPN15O75808 1086 aa14.79□□□□□ -0.04
VARS2-201ENST00000321897 PCCBP05166 539 aa14.79□□□□□ -0.04
VARS2-201ENST00000321897 YES1P07947 543 aa14.79□□□□□ -0.04
VARS2-201ENST00000321897 BMP4P12644 408 aa14.79□□□□□ -0.04
VARS2-201ENST00000321897 PPP5CP53041 499 aa14.79□□□□□ -0.04
VARS2-201ENST00000321897 CSNK2BP67870 215 aa14.79□□□□□ -0.04
VARS2-201ENST00000321897 KHDRBS1Q07666 443 aaKnown RBP eCLIP14.79□□□□□ -0.04
VARS2-201ENST00000321897 SNAPC1Q16533 368 aa14.79□□□□□ -0.04
VARS2-201ENST00000321897 GPAT3Q53EU6 434 aa14.79□□□□□ -0.04
VARS2-201ENST00000321897 BLOC1S3Q6QNY0 202 aa14.79□□□□□ -0.04
VARS2-201ENST00000321897 USP43Q70EL4 1123 aa14.79□□□□□ -0.04
VARS2-201ENST00000321897 CLEC14AQ86T13 490 aa14.79□□□□□ -0.04
VARS2-201ENST00000321897 MMAAQ8IVH4 418 aaKnown RBP14.79□□□□□ -0.04
VARS2-201ENST00000321897 PHC2Q8IXK0 858 aa14.79□□□□□ -0.04
VARS2-201ENST00000321897 C12orf76Q8N812 135 aaPredicted RBP14.79□□□□□ -0.04
VARS2-201ENST00000321897 CHST14Q8NCH0 376 aa14.79□□□□□ -0.04
VARS2-201ENST00000321897 PLD4Q96BZ4 506 aa14.79□□□□□ -0.04
VARS2-201ENST00000321897 PKP4Q99569 1192 aa14.79□□□□□ -0.04
VARS2-201ENST00000321897 C11orf84Q9BUA3 381 aaPredicted RBP14.79□□□□□ -0.04
VARS2-201ENST00000321897 C1QTNF1Q9BXJ1 281 aa14.79□□□□□ -0.04
VARS2-201ENST00000321897 ITPAQ9BY32 194 aa14.79□□□□□ -0.04
VARS2-201ENST00000321897 MRPL39Q9NYK5 338 aaKnown RBP14.79□□□□□ -0.04
VARS2-201ENST00000321897 TAS2R9Q9NYW1 312 aa14.79□□□□□ -0.04
VARS2-201ENST00000321897 TMEM181Q9P2C4 612 aa14.79□□□□□ -0.04
VARS2-201ENST00000321897 RREB1Q92766 1687 aa14.79□□□□□ -0.04
VARS2-201ENST00000321897 ISM1B1AKI9 464 aa14.79□□□□□ -0.04
VARS2-201ENST00000321897 GRM6O15303 877 aa14.79□□□□□ -0.04
VARS2-201ENST00000321897 SLC31A1O15431 190 aa14.79□□□□□ -0.04
VARS2-201ENST00000321897 SSNA1O43805 119 aa14.79□□□□□ -0.04
VARS2-201ENST00000321897 POP4O95707 220 aaKnown RBP14.79□□□□□ -0.04
VARS2-201ENST00000321897 CSF2RAP15509 400 aa14.79□□□□□ -0.04
VARS2-201ENST00000321897 PSMD8P48556 350 aa14.79□□□□□ -0.04
VARS2-201ENST00000321897 RTN4RL1Q86UN2 441 aaPredicted RBP14.79□□□□□ -0.04
VARS2-201ENST00000321897 AMIGO1Q86WK6 493 aa14.79□□□□□ -0.04
VARS2-201ENST00000321897 DTWD1Q8N5C7 304 aa14.79□□□□□ -0.04
VARS2-201ENST00000321897 OR10G6Q8NH81 332 aa14.79□□□□□ -0.04
VARS2-201ENST00000321897 RNF31Q96EP0 1072 aa14.79□□□□□ -0.04
VARS2-201ENST00000321897 IL17FQ96PD4 163 aa14.79□□□□□ -0.04
VARS2-201ENST00000321897 TEX12Q9BXU0 123 aa14.79□□□□□ -0.04
VARS2-201ENST00000321897 VAPAQ9P0L0 249 aa14.79□□□□□ -0.04
VARS2-201ENST00000321897 ITM2BQ9Y287 266 aa14.79□□□□□ -0.04
VARS2-201ENST00000321897 TMEM98Q9Y2Y6 226 aa14.79□□□□□ -0.04
VARS2-201ENST00000321897 ARID1AO14497 2285 aa14.79□□□□□ -0.04
VARS2-201ENST00000321897 ISPDA4D126 451 aa14.79□□□□□ -0.04
VARS2-201ENST00000321897 SCELO95171 688 aa14.79□□□□□ -0.04
VARS2-201ENST00000321897 CD40LGP29965 261 aa14.79□□□□□ -0.04
VARS2-201ENST00000321897 RNF144AP50876 292 aaPredicted RBP14.79□□□□□ -0.04
VARS2-201ENST00000321897 GET4Q7L5D6 327 aaPredicted RBP14.79□□□□□ -0.04
VARS2-201ENST00000321897 CACTIN-AS1Q8N1I8 211 aa14.79□□□□□ -0.04
VARS2-201ENST00000321897 TMCO6Q96DC7 493 aa14.79□□□□□ -0.04
VARS2-201ENST00000321897 NECTIN4Q96NY8 510 aa14.79□□□□□ -0.04
VARS2-201ENST00000321897 TUBA1CQ9BQE3 449 aa14.79□□□□□ -0.04
VARS2-201ENST00000321897 C12orf4Q9NQ89 552 aa14.79□□□□□ -0.04
VARS2-201ENST00000321897 HCFC1R1Q9NWW0 138 aa14.79□□□□□ -0.04
VARS2-201ENST00000321897 DUS2Q9NX74 493 aaKnown RBP14.79□□□□□ -0.04
VARS2-201ENST00000321897 PCTPQ9UKL6 214 aa14.79□□□□□ -0.04
VARS2-201ENST00000321897 ACSL6Q9UKU0 697 aa14.79□□□□□ -0.04
VARS2-201ENST00000321897 INSL5Q9Y5Q6 135 aa14.79□□□□□ -0.04
VARS2-201ENST00000321897 GSAPA4D1B5 854 aa14.78□□□□□ -0.04
VARS2-201ENST00000321897 MANBAO00462 879 aa14.78□□□□□ -0.04
VARS2-201ENST00000321897 CREG1O75629 220 aa14.78□□□□□ -0.04
VARS2-201ENST00000321897 APOL3O95236 402 aa14.78□□□□□ -0.04
VARS2-201ENST00000321897 DCKP27707 260 aa14.78□□□□□ -0.04
VARS2-201ENST00000321897 GSTM2P28161 218 aa14.78□□□□□ -0.04
VARS2-201ENST00000321897 ZNF33AQ06730 810 aa14.78□□□□□ -0.04
VARS2-201ENST00000321897 CYBRD1Q53TN4 286 aa14.78□□□□□ -0.04
VARS2-201ENST00000321897 FRG2Q64ET8 278 aa14.78□□□□□ -0.04
VARS2-201ENST00000321897 CLECL1Q8IZS7 167 aa14.78□□□□□ -0.04
VARS2-201ENST00000321897 IGSF21Q96ID5 467 aa14.78□□□□□ -0.04
VARS2-201ENST00000321897 ZNF599Q96NL3 588 aa14.78□□□□□ -0.04
VARS2-201ENST00000321897 FRG2BQ96QU4 278 aa14.78□□□□□ -0.04
VARS2-201ENST00000321897 NUSAP1Q9BXS6 441 aaKnown RBP14.78□□□□□ -0.04
VARS2-201ENST00000321897 RBM38Q9H0Z9 239 aaKnown RBP14.78□□□□□ -0.04
VARS2-201ENST00000321897 ARMC1Q9NVT9 282 aa14.78□□□□□ -0.04
VARS2-201ENST00000321897 SLC28A2O43868 658 aa14.78□□□□□ -0.04
VARS2-201ENST00000321897 ERN1O75460 977 aaKnown RBP14.78□□□□□ -0.04
VARS2-201ENST00000321897 ATXN1LP0C7T5 689 aaKnown RBP14.78□□□□□ -0.04
VARS2-201ENST00000321897 BCKDHAP12694 445 aa14.78□□□□□ -0.04
VARS2-201ENST00000321897 SELPLGQ14242 412 aa14.78□□□□□ -0.04
VARS2-201ENST00000321897 NFE2L1Q14494 772 aa14.78□□□□□ -0.04
VARS2-201ENST00000321897 LCN8Q6JVE9 175 aa14.78□□□□□ -0.04
VARS2-201ENST00000321897 LARP4Q71RC2 724 aaKnown RBP eCLIP14.78□□□□□ -0.049e-7■■□□□ 13.7
VARS2-201ENST00000321897 C10orf53Q8N6V4 93 aa14.78□□□□□ -0.04
VARS2-201ENST00000321897 CXorf40AQ8TE69 158 aa14.78□□□□□ -0.04
VARS2-201ENST00000321897 DUSP26Q9BV47 211 aa14.78□□□□□ -0.04
VARS2-201ENST00000321897 LINC00597Q9H2U6 94 aa14.78□□□□□ -0.04
VARS2-201ENST00000321897 TRIT1Q9H3H1 467 aaKnown RBP14.78□□□□□ -0.04
VARS2-201ENST00000321897 IL26Q9NPH9 171 aa14.78□□□□□ -0.04
VARS2-201ENST00000321897 SNX7Q9UNH6 387 aa14.78□□□□□ -0.04
VARS2-201ENST00000321897 DHRS7Q9Y394 339 aa14.78□□□□□ -0.04
VARS2-201ENST00000321897 ASB1Q9Y576 335 aa14.78□□□□□ -0.04
VARS2-201ENST00000321897 M0R129 80 aa14.78□□□□□ -0.04
VARS2-201ENST00000321897 LATO43561 262 aa14.78□□□□□ -0.04
VARS2-201ENST00000321897 SOX14O95416 240 aa14.78□□□□□ -0.04
VARS2-201ENST00000321897 PDYNP01213 254 aa14.78□□□□□ -0.04
VARS2-201ENST00000321897 ATF6P18850 670 aa14.78□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms