RNA–Protein interactions for RNA: ENST00000319980.10

IFT88-201, Transcript of intraflagellar transport 88, humanhuman

TSL 1 (best) BASIC

Gene IFT88, Length 3,091 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT88-201ENST00000319980 LRRC56Q8IYG6 542 aaPredicted RBP7.29□□□□□ -1.24
IFT88-201ENST00000319980 GANCQ8TET4 914 aa7.29□□□□□ -1.24
IFT88-201ENST00000319980 SLC5A11Q8WWX8 675 aa7.29□□□□□ -1.24
IFT88-201ENST00000319980 SNX19Q92543 992 aa7.29□□□□□ -1.24
IFT88-201ENST00000319980 TMBIM1Q969X1 311 aa7.29□□□□□ -1.24
IFT88-201ENST00000319980 SLC47A1Q96FL8 570 aa7.29□□□□□ -1.24
IFT88-201ENST00000319980 EFCAB11Q9BUY7 163 aa7.29□□□□□ -1.24
IFT88-201ENST00000319980 DUSP26Q9BV47 211 aa7.29□□□□□ -1.24
IFT88-201ENST00000319980 GRIP2Q9C0E4 1043 aa7.29□□□□□ -1.24
IFT88-201ENST00000319980 RSPH9Q9H1X1 276 aaPredicted RBP7.29□□□□□ -1.24
IFT88-201ENST00000319980 AASDHPPTQ9NRN7 309 aa7.29□□□□□ -1.24
IFT88-201ENST00000319980 PNPLA3Q9NST1 481 aa7.29□□□□□ -1.24
IFT88-201ENST00000319980 DCAF13Q9NV06 445 aaKnown RBP7.29□□□□□ -1.24
IFT88-201ENST00000319980 SMPD3Q9NY59 655 aaPredicted RBP7.29□□□□□ -1.24
IFT88-201ENST00000319980 MSRAQ9UJ68 235 aa7.29□□□□□ -1.24
IFT88-201ENST00000319980 SUFUQ9UMX1 484 aa7.29□□□□□ -1.24
IFT88-201ENST00000319980 F5P12259 2224 aa7.29□□□□□ -1.24
IFT88-201ENST00000319980 FAM220BPB1ANY3 271 aa7.29□□□□□ -1.24
IFT88-201ENST00000319980 UPK1AO00322 258 aa7.29□□□□□ -1.24
IFT88-201ENST00000319980 SCAMP2O15127 329 aaKnown RBP7.29□□□□□ -1.24
IFT88-201ENST00000319980 PI15O43692 258 aa7.29□□□□□ -1.24
IFT88-201ENST00000319980 PCDH7O60245 1069 aa7.29□□□□□ -1.24
IFT88-201ENST00000319980 EPN2O95208 641 aa7.29□□□□□ -1.24
IFT88-201ENST00000319980 SNAP29O95721 258 aa7.29□□□□□ -1.24
IFT88-201ENST00000319980 TRPC1P48995 793 aa7.29□□□□□ -1.24
IFT88-201ENST00000319980 GZMMP51124 257 aa7.29□□□□□ -1.24
IFT88-201ENST00000319980 GALK1P51570 392 aa7.29□□□□□ -1.24
IFT88-201ENST00000319980 CCR3P51677 355 aa7.29□□□□□ -1.24
IFT88-201ENST00000319980 ABHD18Q0P651 414 aa7.29□□□□□ -1.24
IFT88-201ENST00000319980 PPP1R8Q12972 351 aaKnown RBP7.29□□□□□ -1.24
IFT88-201ENST00000319980 E2F2Q14209 437 aa7.29□□□□□ -1.24
IFT88-201ENST00000319980 HIST2H2ACQ16777 129 aaPredicted RBP7.29□□□□□ -1.24
IFT88-201ENST00000319980 SLC36A3Q495N2 470 aa7.29□□□□□ -1.24
IFT88-201ENST00000319980 C2orf27AQ580R0 203 aa7.29□□□□□ -1.24
IFT88-201ENST00000319980 IER5LQ5T953 404 aa7.29□□□□□ -1.24
IFT88-201ENST00000319980 HIST2H2AA3Q6FI13 130 aa7.29□□□□□ -1.24
IFT88-201ENST00000319980 NXPE4Q6UWF7 544 aa7.29□□□□□ -1.24
IFT88-201ENST00000319980 CHST15Q7LFX5 561 aaPredicted RBP7.29□□□□□ -1.24
IFT88-201ENST00000319980 PDZD3Q86UT5 571 aa7.29□□□□□ -1.24
IFT88-201ENST00000319980 ZDHHC13Q8IUH4 622 aa7.29□□□□□ -1.24
IFT88-201ENST00000319980 CLEC4FQ8N1N0 589 aa7.29□□□□□ -1.24
IFT88-201ENST00000319980 MRPL38Q96DV4 380 aaKnown RBP7.29□□□□□ -1.24
IFT88-201ENST00000319980 RMND5BQ96G75 393 aaPredicted RBP7.29□□□□□ -1.24
IFT88-201ENST00000319980 REXO5Q96IC2 774 aaKnown RBP7.29□□□□□ -1.24
IFT88-201ENST00000319980 FBXL20Q96IG2 436 aa7.29□□□□□ -1.24
IFT88-201ENST00000319980 METTL2AQ96IZ6 378 aaKnown RBP7.29□□□□□ -1.24
IFT88-201ENST00000319980 FAM120CQ9NX05 1096 aaKnown RBP7.29□□□□□ -1.24
IFT88-201ENST00000319980 MYRFQ9Y2G1 1151 aa7.29□□□□□ -1.24
IFT88-201ENST00000319980 CROCCQ5TZA2 2017 aa7.29□□□□□ -1.24
IFT88-201ENST00000319980 DNAH14Q0VDD8 3507 aa7.29□□□□□ -1.24
IFT88-201ENST00000319980 ENO4A6NNW6 628 aa7.29□□□□□ -1.24
IFT88-201ENST00000319980 LATO43561 262 aa7.29□□□□□ -1.24
IFT88-201ENST00000319980 RETP07949 1114 aa7.29□□□□□ -1.24
IFT88-201ENST00000319980 TIA1P31483 386 aaKnown RBP eCLIP7.29□□□□□ -1.24
IFT88-201ENST00000319980 ASMTP46597 345 aa7.29□□□□□ -1.24
IFT88-201ENST00000319980 CAMK2GQ13555 558 aaPredicted RBP7.29□□□□□ -1.24
IFT88-201ENST00000319980 ZIK1Q3SY52 487 aaPredicted RBP7.29□□□□□ -1.24
IFT88-201ENST00000319980 NADK2Q4G0N4 442 aa7.29□□□□□ -1.24
IFT88-201ENST00000319980 LRRC23Q53EV4 343 aaPredicted RBP7.29□□□□□ -1.24
IFT88-201ENST00000319980 PRAMEF14Q5SWL7 426 aa7.29□□□□□ -1.24
IFT88-201ENST00000319980 PRAMEF13Q5VWM6 474 aa7.29□□□□□ -1.24
IFT88-201ENST00000319980 CES5AQ6NT32 575 aa7.29□□□□□ -1.24
IFT88-201ENST00000319980 UNC5DQ6UXZ4 953 aa7.29□□□□□ -1.24
IFT88-201ENST00000319980 MSANTD1Q6ZTZ1 278 aa7.29□□□□□ -1.24
IFT88-201ENST00000319980 ARMCX6Q7L4S7 300 aa7.29□□□□□ -1.24
IFT88-201ENST00000319980 COMMD6Q7Z4G1 85 aa7.29□□□□□ -1.24
IFT88-201ENST00000319980 OFCC1Q8IZS5 231 aa7.29□□□□□ -1.24
IFT88-201ENST00000319980 ZNF786Q8N393 782 aa7.29□□□□□ -1.24
IFT88-201ENST00000319980 DHRSXQ8N5I4 330 aa7.29□□□□□ -1.24
IFT88-201ENST00000319980 METTL25Q8N6Q8 603 aa7.29□□□□□ -1.24
IFT88-201ENST00000319980 VPS37AQ8NEZ2 397 aa7.29□□□□□ -1.24
IFT88-201ENST00000319980 TSPAN14Q8NG11 270 aa7.29□□□□□ -1.24
IFT88-201ENST00000319980 DPH2Q9BQC3 489 aaPredicted RBP7.29□□□□□ -1.24
IFT88-201ENST00000319980 MRPS26Q9BYN8 205 aaKnown RBP7.29□□□□□ -1.24
IFT88-201ENST00000319980 MKRN2Q9H000 416 aaKnown RBP7.29□□□□□ -1.24
IFT88-201ENST00000319980 WDR26Q9H7D7 661 aa7.29□□□□□ -1.24
IFT88-201ENST00000319980 C8orf4Q9NR00 106 aa7.29□□□□□ -1.24
IFT88-201ENST00000319980 ZNF639Q9UID6 485 aa7.29□□□□□ -1.24
IFT88-201ENST00000319980 C2orf16Q68DN1 1984 aa7.28□□□□□ -1.24
IFT88-201ENST00000319980 NUP210Q8TEM1 1887 aaPredicted RBP7.28□□□□□ -1.24
IFT88-201ENST00000319980 HSFX4A0A1B0GTS1 333 aaPredicted RBP7.28□□□□□ -1.24
IFT88-201ENST00000319980 HSFX3A0A1B0GWH4 333 aaPredicted RBP7.28□□□□□ -1.24
IFT88-201ENST00000319980 G3V2T6 193 aa7.28□□□□□ -1.24
IFT88-201ENST00000319980 H3BNH8 94 aa7.28□□□□□ -1.24
IFT88-201ENST00000319980 ZNF682O95780 498 aa7.28□□□□□ -1.24
IFT88-201ENST00000319980 NTRK1P04629 796 aa7.28□□□□□ -1.24
IFT88-201ENST00000319980 ABCB1P08183 1280 aaPredicted RBP7.28□□□□□ -1.24
IFT88-201ENST00000319980 C5AR1P21730 350 aa7.28□□□□□ -1.24
IFT88-201ENST00000319980 KELP23276 732 aa7.28□□□□□ -1.24
IFT88-201ENST00000319980 CLCNKAP51800 687 aa7.28□□□□□ -1.24
IFT88-201ENST00000319980 ARSFP54793 590 aa7.28□□□□□ -1.24
IFT88-201ENST00000319980 DLX2Q07687 328 aaPredicted RBP7.28□□□□□ -1.24
IFT88-201ENST00000319980 RPA4Q13156 261 aa7.28□□□□□ -1.24
IFT88-201ENST00000319980 FGL2Q14314 439 aa7.28□□□□□ -1.24
IFT88-201ENST00000319980 C16orf72Q14CZ0 275 aa7.28□□□□□ -1.24
IFT88-201ENST00000319980 CYBRD1Q53TN4 286 aa7.28□□□□□ -1.24
IFT88-201ENST00000319980 METRNLQ641Q3 311 aa7.28□□□□□ -1.24
IFT88-201ENST00000319980 KIAA1211LQ6NV74 962 aa7.28□□□□□ -1.24
IFT88-201ENST00000319980 TTC33Q6PID6 262 aaPredicted RBP7.28□□□□□ -1.24
IFT88-201ENST00000319980 TMEM184AQ6ZMB5 413 aa7.28□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms