RNA–Protein interactions for RNA: ENST00000307712.10

SEC23A-201, Transcript of Sec23 homolog A, coat complex II component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SEC23A, Length 4,135 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC23A-201ENST00000307712 RFX3P48380 749 aa13.05□□□□□ -0.32
SEC23A-201ENST00000307712 CCL14Q16627 93 aa13.05□□□□□ -0.32
SEC23A-201ENST00000307712 WSCD2Q2TBF2 565 aa13.05□□□□□ -0.32
SEC23A-201ENST00000307712 NFKBIDQ8NI38 313 aa13.05□□□□□ -0.32
SEC23A-201ENST00000307712 ADAMTS16Q8TE57 1224 aa13.05□□□□□ -0.32
SEC23A-201ENST00000307712 KLHL6Q8WZ60 621 aa13.05□□□□□ -0.32
SEC23A-201ENST00000307712 TMEM169Q96HH4 297 aa13.05□□□□□ -0.32
SEC23A-201ENST00000307712 EGLN2Q96KS0 407 aa13.05□□□□□ -0.32
SEC23A-201ENST00000307712 LOC285095A0A1B0GVY8 99 aa13.05□□□□□ -0.32
SEC23A-201ENST00000307712 TRBC2A0A5B9 178 aa13.05□□□□□ -0.32
SEC23A-201ENST00000307712 TLR4O00206 839 aa13.05□□□□□ -0.32
SEC23A-201ENST00000307712 RPL17P18621 184 aaKnown RBP13.05□□□□□ -0.32
SEC23A-201ENST00000307712 CTBSQ01459 385 aa13.05□□□□□ -0.32
SEC23A-201ENST00000307712 TARDBPQ13148 414 aaKnown RBP eCLIP13.05□□□□□ -0.32
SEC23A-201ENST00000307712 PPIGQ13427 754 aaKnown RBP eCLIP13.05□□□□□ -0.321e-7■□□□□ 11
SEC23A-201ENST00000307712 UAP1L1Q3KQV9 507 aa13.05□□□□□ -0.32
SEC23A-201ENST00000307712 AGAP6Q5VW22 663 aa13.05□□□□□ -0.32
SEC23A-201ENST00000307712 CPZQ66K79 652 aa13.05□□□□□ -0.32
SEC23A-201ENST00000307712 ALKAL1Q6UXT8 129 aa13.05□□□□□ -0.32
SEC23A-201ENST00000307712 AGAP4Q96P64 663 aa13.05□□□□□ -0.32
SEC23A-201ENST00000307712 SMURF1Q9HCE7 757 aa13.05□□□□□ -0.32
SEC23A-201ENST00000307712 UCKL1Q9NWZ5 548 aa13.05□□□□□ -0.32
SEC23A-201ENST00000307712 CDV3Q9UKY7 258 aaKnown RBP13.05□□□□□ -0.32
SEC23A-201ENST00000307712 SSNA1O43805 119 aa13.04□□□□□ -0.32
SEC23A-201ENST00000307712 UGT2B17O75795 530 aa13.04□□□□□ -0.32
SEC23A-201ENST00000307712 RPLP2P05387 115 aaKnown RBP13.04□□□□□ -0.32
SEC23A-201ENST00000307712 SLC2A2P11168 524 aaPredicted RBP13.04□□□□□ -0.32
SEC23A-201ENST00000307712 PTX3P26022 381 aaPredicted RBP13.04□□□□□ -0.32
SEC23A-201ENST00000307712 MAPK8P45983 427 aa13.04□□□□□ -0.32
SEC23A-201ENST00000307712 CDC73Q6P1J9 531 aa13.04□□□□□ -0.32
SEC23A-201ENST00000307712 DLEU7Q6UYE1 221 aa13.04□□□□□ -0.32
SEC23A-201ENST00000307712 GPR149Q86SP6 731 aa13.04□□□□□ -0.32
SEC23A-201ENST00000307712 CELF2-AS1Q8N7Q2 184 aa13.04□□□□□ -0.32
SEC23A-201ENST00000307712 BBS4Q96RK4 519 aa13.04□□□□□ -0.32
SEC23A-201ENST00000307712 SLC35A5Q9BS91 424 aa13.04□□□□□ -0.32
SEC23A-201ENST00000307712 GULP1Q9UBP9 304 aa13.04□□□□□ -0.32
SEC23A-201ENST00000307712 CLCA1A8K7I4 914 aa13.04□□□□□ -0.32
SEC23A-201ENST00000307712 E2F3O00716 465 aa13.04□□□□□ -0.32
SEC23A-201ENST00000307712 ORC5O43913 435 aa13.04□□□□□ -0.32
SEC23A-201ENST00000307712 SEMA3DO95025 777 aa13.04□□□□□ -0.32
SEC23A-201ENST00000307712 APOL3O95236 402 aa13.04□□□□□ -0.32
SEC23A-201ENST00000307712 DHFRP00374 187 aa13.04□□□□□ -0.32
SEC23A-201ENST00000307712 CSTF2P33240 577 aaKnown RBP eCLIP13.04□□□□□ -0.32
SEC23A-201ENST00000307712 CASP3P42574 277 aa13.04□□□□□ -0.32
SEC23A-201ENST00000307712 SMIM11AP58511 58 aa13.04□□□□□ -0.32
SEC23A-201ENST00000307712 PTPRRQ15256 657 aa13.04□□□□□ -0.32
SEC23A-201ENST00000307712 BCL7AQ4VC05 210 aa13.04□□□□□ -0.32
SEC23A-201ENST00000307712 PYCR3Q53H96 274 aa13.04□□□□□ -0.32
SEC23A-201ENST00000307712 CEP68Q76N32 757 aa13.04□□□□□ -0.32
SEC23A-201ENST00000307712 CMTM7Q96FZ5 175 aa13.04□□□□□ -0.32
SEC23A-201ENST00000307712 SLC38A2Q96QD8 506 aa13.04□□□□□ -0.32
SEC23A-201ENST00000307712 MED28Q9H204 178 aa13.04□□□□□ -0.32
SEC23A-201ENST00000307712 ZNF282Q9UDV7 671 aaPredicted RBP13.04□□□□□ -0.32
SEC23A-201ENST00000307712 NUFIP1Q9UHK0 495 aaKnown RBP13.04□□□□□ -0.32
SEC23A-201ENST00000307712 DLGAP4Q9Y2H0 992 aa13.04□□□□□ -0.32
SEC23A-201ENST00000307712 ADAMTSL1Q8N6G6 1762 aa13.04□□□□□ -0.32
SEC23A-201ENST00000307712 NME6O75414 186 aaPredicted RBP13.04□□□□□ -0.32
SEC23A-201ENST00000307712 ST8SIA6P61647 398 aa13.04□□□□□ -0.32
SEC23A-201ENST00000307712 AP1S1P61966 158 aa13.04□□□□□ -0.32
SEC23A-201ENST00000307712 EXOC3L2Q2M3D2 409 aa13.04□□□□□ -0.32
SEC23A-201ENST00000307712 LIPKQ5VXJ0 399 aa13.04□□□□□ -0.32
SEC23A-201ENST00000307712 PEX5LQ8IYB4 626 aa13.04□□□□□ -0.32
SEC23A-201ENST00000307712 ELMOD2Q8IZ81 293 aa13.04□□□□□ -0.32
SEC23A-201ENST00000307712 FAM129BQ96TA1 746 aa13.04□□□□□ -0.32
SEC23A-201ENST00000307712 CAPN10Q9HC96 672 aa13.04□□□□□ -0.32
SEC23A-201ENST00000307712 PRELID1Q9Y255 219 aa13.04□□□□□ -0.32
SEC23A-201ENST00000307712 GRXCR2A6NFK2 248 aa13.03□□□□□ -0.32
SEC23A-201ENST00000307712 PCDH7O60245 1069 aa13.03□□□□□ -0.32
SEC23A-201ENST00000307712 CDK6Q00534 326 aa13.03□□□□□ -0.32
SEC23A-201ENST00000307712 HNRNPA0Q13151 305 aaKnown RBP13.03□□□□□ -0.32
SEC23A-201ENST00000307712 KEAP1Q14145 624 aa13.03□□□□□ -0.32
SEC23A-201ENST00000307712 FAM110CQ1W6H9 321 aa13.03□□□□□ -0.32
SEC23A-201ENST00000307712 SNAP47Q5SQN1 464 aa13.03□□□□□ -0.32
SEC23A-201ENST00000307712 TCEANCQ8N8B7 351 aa13.03□□□□□ -0.32
SEC23A-201ENST00000307712 MDGA1Q8NFP4 955 aa13.03□□□□□ -0.32
SEC23A-201ENST00000307712 LILRB4Q8NHJ6 448 aa13.03□□□□□ -0.32
SEC23A-201ENST00000307712 TEX47Q8TBZ9 253 aa13.03□□□□□ -0.32
SEC23A-201ENST00000307712 SH3RF2Q8TEC5 729 aa13.03□□□□□ -0.32
SEC23A-201ENST00000307712 CSF3RQ99062 836 aa13.03□□□□□ -0.32
SEC23A-201ENST00000307712 MMP28Q9H239 520 aa13.03□□□□□ -0.32
SEC23A-201ENST00000307712 NTN4Q9HB63 628 aa13.03□□□□□ -0.32
SEC23A-201ENST00000307712 IL1RAPQ9NPH3 570 aa13.03□□□□□ -0.32
SEC23A-201ENST00000307712 TRPS1Q9UHF7 1281 aa13.03□□□□□ -0.32
SEC23A-201ENST00000307712 HCN4Q9Y3Q4 1203 aa13.03□□□□□ -0.32
SEC23A-201ENST00000307712 RPL36Q9Y3U8 105 aaKnown RBP13.03□□□□□ -0.32
SEC23A-201ENST00000307712 MYO10Q9HD67 2058 aa13.03□□□□□ -0.32
SEC23A-201ENST00000307712 ZSCAN5BA6NJL1 495 aa13.03□□□□□ -0.32
SEC23A-201ENST00000307712 MUSKO15146 869 aa13.03□□□□□ -0.32
SEC23A-201ENST00000307712 DAPP51397 102 aa13.03□□□□□ -0.32
SEC23A-201ENST00000307712 SNRPD2P62316 118 aaKnown RBP13.03□□□□□ -0.32
SEC23A-201ENST00000307712 POLR2LP62875 67 aaKnown RBP13.03□□□□□ -0.32
SEC23A-201ENST00000307712 PPP2R2BQ00005 443 aa13.03□□□□□ -0.32
SEC23A-201ENST00000307712 PCBP2Q15366 365 aaKnown RBP eCLIP13.03□□□□□ -0.32
SEC23A-201ENST00000307712 CARD16Q5EG05 197 aa13.03□□□□□ -0.32
SEC23A-201ENST00000307712 PPP2R2DQ66LE6 453 aa13.03□□□□□ -0.32
SEC23A-201ENST00000307712 ASB18Q6ZVZ8 466 aa13.03□□□□□ -0.32
SEC23A-201ENST00000307712 LYSMD2Q8IV50 215 aa13.03□□□□□ -0.32
SEC23A-201ENST00000307712 LRRC20Q8TCA0 184 aa13.03□□□□□ -0.32
SEC23A-201ENST00000307712 GANCQ8TET4 914 aa13.03□□□□□ -0.32
SEC23A-201ENST00000307712 MAGEB10Q96LZ2 347 aaPredicted RBP13.03□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms