RNA–Protein interactions for RNA: ENST00000301732.9

ABCA3-201, Transcript of ATP binding cassette subfamily A member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ABCA3, Length 6,609 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA3-201ENST00000301732 ZNF701Q9NV72 531 aaPredicted RBP12.02□□□□□ -0.49
ABCA3-201ENST00000301732 DEC1Q9P2X7 70 aa12.02□□□□□ -0.49
ABCA3-201ENST00000301732 HCN2Q9UL51 889 aa12.02□□□□□ -0.49
ABCA3-201ENST00000301732 RNF6Q9Y252 685 aa12.02□□□□□ -0.49
ABCA3-201ENST00000301732 PCDHB1Q9Y5F3 818 aa12.02□□□□□ -0.49
ABCA3-201ENST00000301732 A0A1B0GVC2 190 aa12.02□□□□□ -0.49
ABCA3-201ENST00000301732 A6NIN4 97 aa12.02□□□□□ -0.49
ABCA3-201ENST00000301732 A8MT66 165 aa12.02□□□□□ -0.49
ABCA3-201ENST00000301732 HSPA12AO43301 675 aa12.02□□□□□ -0.49
ABCA3-201ENST00000301732 PIP5K1CO60331 668 aa12.02□□□□□ -0.49
ABCA3-201ENST00000301732 CD2P06729 351 aa12.02□□□□□ -0.49
ABCA3-201ENST00000301732 GRM5P41594 1212 aa12.02□□□□□ -0.49
ABCA3-201ENST00000301732 GSK3BP49841 420 aa12.02□□□□□ -0.49
ABCA3-201ENST00000301732 CDH11P55287 796 aa12.02□□□□□ -0.49
ABCA3-201ENST00000301732 ZXDBP98169 803 aa12.02□□□□□ -0.49
ABCA3-201ENST00000301732 ZBED5Q49AG3 693 aa12.02□□□□□ -0.49
ABCA3-201ENST00000301732 PDSS2Q86YH6 399 aa12.02□□□□□ -0.49
ABCA3-201ENST00000301732 PLD6Q8N2A8 252 aaKnown RBP12.02□□□□□ -0.49
ABCA3-201ENST00000301732 AP1S3Q96PC3 154 aa12.02□□□□□ -0.49
ABCA3-201ENST00000301732 DPYSL5Q9BPU6 564 aa12.02□□□□□ -0.49
ABCA3-201ENST00000301732 SLC30A2Q9BRI3 323 aa12.02□□□□□ -0.49
ABCA3-201ENST00000301732 SPATA9Q9BWV2 254 aa12.02□□□□□ -0.49
ABCA3-201ENST00000301732 LRRC3Q9BY71 257 aa12.02□□□□□ -0.49
ABCA3-201ENST00000301732 ZFR2Q9UPR6 939 aaKnown RBP12.02□□□□□ -0.49
ABCA3-201ENST00000301732 RPL36Q9Y3U8 105 aaKnown RBP12.02□□□□□ -0.49
ABCA3-201ENST00000301732 SPATA31C2B4DYI2 1134 aa12.02□□□□□ -0.49
ABCA3-201ENST00000301732 MATN3O15232 486 aa12.02□□□□□ -0.49
ABCA3-201ENST00000301732 ADH1AP07327 375 aa12.02□□□□□ -0.49
ABCA3-201ENST00000301732 APLP1P51693 650 aa12.02□□□□□ -0.49
ABCA3-201ENST00000301732 SLC18A1P54219 525 aa12.02□□□□□ -0.49
ABCA3-201ENST00000301732 SFRP4Q6FHJ7 346 aaPredicted RBP12.02□□□□□ -0.49
ABCA3-201ENST00000301732 ENPP7Q6UWV6 458 aa12.02□□□□□ -0.49
ABCA3-201ENST00000301732 STRADAQ7RTN6 431 aa12.02□□□□□ -0.49
ABCA3-201ENST00000301732 ISOC1Q96CN7 298 aa12.02□□□□□ -0.49
ABCA3-201ENST00000301732 DUS2Q9NX74 493 aaKnown RBP12.02□□□□□ -0.49
ABCA3-201ENST00000301732 COL20A1Q9P218 1284 aa12.02□□□□□ -0.49
ABCA3-201ENST00000301732 PADI3Q9ULW8 664 aa12.02□□□□□ -0.49
ABCA3-201ENST00000301732 CEP152O94986 1710 aa12.02□□□□□ -0.49
ABCA3-201ENST00000301732 M0R233 179 aa12.01□□□□□ -0.49
ABCA3-201ENST00000301732 CSTBP04080 98 aaKnown RBP12.01□□□□□ -0.49
ABCA3-201ENST00000301732 JAM2P57087 298 aa12.01□□□□□ -0.49
ABCA3-201ENST00000301732 RAB39AQ14964 217 aa12.01□□□□□ -0.49
ABCA3-201ENST00000301732 MFSD13AQ14CX5 517 aa12.01□□□□□ -0.49
ABCA3-201ENST00000301732 SSX2Q16385 188 aa12.01□□□□□ -0.49
ABCA3-201ENST00000301732 KLHL22Q53GT1 634 aa12.01□□□□□ -0.49
ABCA3-201ENST00000301732 SPANXN4Q5MJ08 99 aa12.01□□□□□ -0.49
ABCA3-201ENST00000301732 C22orf42Q6IC83 251 aa12.01□□□□□ -0.49
ABCA3-201ENST00000301732 GPALPP1Q8IXQ4 340 aa12.01□□□□□ -0.49
ABCA3-201ENST00000301732 BEND7Q8N7W2 519 aaPredicted RBP12.01□□□□□ -0.49
ABCA3-201ENST00000301732 OR4F6Q8NGB9 312 aa12.01□□□□□ -0.49
ABCA3-201ENST00000301732 HMGB4Q8WW32 186 aa12.01□□□□□ -0.49
ABCA3-201ENST00000301732 PPIL3Q9H2H8 161 aaKnown RBP12.01□□□□□ -0.49
ABCA3-201ENST00000301732 KCNS2Q9ULS6 477 aa12.01□□□□□ -0.49
ABCA3-201ENST00000301732 PCDHGB3Q9Y5G1 929 aa12.01□□□□□ -0.49
ABCA3-201ENST00000301732 ABLIM1O14639 778 aa12.01□□□□□ -0.49
ABCA3-201ENST00000301732 CLDN11O75508 207 aa12.01□□□□□ -0.49
ABCA3-201ENST00000301732 TNFRSF1BP20333 461 aa12.01□□□□□ -0.49
ABCA3-201ENST00000301732 CRYBB1P53674 252 aaPredicted RBP12.01□□□□□ -0.49
ABCA3-201ENST00000301732 DSTNP60981 165 aa12.01□□□□□ -0.49
ABCA3-201ENST00000301732 ALG10Q5BKT4 473 aa12.01□□□□□ -0.49
ABCA3-201ENST00000301732 LYSMD3Q7Z3D4 306 aa12.01□□□□□ -0.49
ABCA3-201ENST00000301732 RNF130Q86XS8 419 aa12.01□□□□□ -0.49
ABCA3-201ENST00000301732 ROPN1LQ96C74 230 aa12.01□□□□□ -0.49
ABCA3-201ENST00000301732 ZNF641Q96N77 438 aaPredicted RBP12.01□□□□□ -0.49
ABCA3-201ENST00000301732 PHOX2BQ99453 314 aa12.01□□□□□ -0.49
ABCA3-201ENST00000301732 THUMPD1Q9NXG2 353 aaKnown RBP12.01□□□□□ -0.49
ABCA3-201ENST00000301732 UTS2RQ9UKP6 389 aa12.01□□□□□ -0.49
ABCA3-201ENST00000301732 PXDNQ92626 1479 aa12.01□□□□□ -0.49
ABCA3-201ENST00000301732 CPED1A4D0V7 1026 aa12.01□□□□□ -0.49
ABCA3-201ENST00000301732 B3GALT2O43825 422 aa12.01□□□□□ -0.49
ABCA3-201ENST00000301732 CLDN7O95471 211 aa12.01□□□□□ -0.49
ABCA3-201ENST00000301732 ADH1CP00326 375 aa12.01□□□□□ -0.49
ABCA3-201ENST00000301732 SSTR4P31391 388 aa12.01□□□□□ -0.49
ABCA3-201ENST00000301732 RPS26P62854 115 aaKnown RBP12.01□□□□□ -0.49
ABCA3-201ENST00000301732 SIRPB2Q5JXA9 342 aa12.01□□□□□ -0.49
ABCA3-201ENST00000301732 TUBA3EQ6PEY2 450 aa12.01□□□□□ -0.49
ABCA3-201ENST00000301732 MMAAQ8IVH4 418 aaKnown RBP12.01□□□□□ -0.49
ABCA3-201ENST00000301732 IGDCC3Q8IVU1 814 aa12.01□□□□□ -0.49
ABCA3-201ENST00000301732 WDR20Q8TBZ3 569 aa12.01□□□□□ -0.49
ABCA3-201ENST00000301732 NSUN5Q96P11 429 aaKnown RBP12.01□□□□□ -0.49
ABCA3-201ENST00000301732 EXTL2Q9UBQ6 330 aa12.01□□□□□ -0.49
ABCA3-201ENST00000301732 COPS7AQ9UBW8 275 aa12.01□□□□□ -0.49
ABCA3-201ENST00000301732 PCDHA2Q9Y5H9 948 aa12.01□□□□□ -0.49
ABCA3-201ENST00000301732 SPATA31A5Q5VU36 1347 aa12.01□□□□□ -0.49
ABCA3-201ENST00000301732 SPATA31A7Q8IWB4 1347 aa12.01□□□□□ -0.49
ABCA3-201ENST00000301732 A0A1W2PPL8 197 aa12.01□□□□□ -0.49
ABCA3-201ENST00000301732 H7C2Y5 167 aa12.01□□□□□ -0.49
ABCA3-201ENST00000301732 CNOT4O95628 575 aaKnown RBP12.01□□□□□ -0.49
ABCA3-201ENST00000301732 TYRP1P17643 537 aa12.01□□□□□ -0.49
ABCA3-201ENST00000301732 GARNL3Q5VVW2 1013 aa12.01□□□□□ -0.49
ABCA3-201ENST00000301732 TLE6Q9H808 572 aa12.01□□□□□ -0.49
ABCA3-201ENST00000301732 ABCD2Q9UBJ2 740 aa12.01□□□□□ -0.49
ABCA3-201ENST00000301732 REV1Q9UBZ9 1251 aa12.01□□□□□ -0.49
ABCA3-201ENST00000301732 MRTO4Q9UKD2 239 aaKnown RBP12.01□□□□□ -0.49
ABCA3-201ENST00000301732 A0A1W2PRU2 124 aa12.01□□□□□ -0.49
ABCA3-201ENST00000301732 MEIS3P1A6NDR6 274 aa12.01□□□□□ -0.49
ABCA3-201ENST00000301732 SLC9A3R1O14745 358 aaPredicted RBP12.01□□□□□ -0.49
ABCA3-201ENST00000301732 CCKBRP32239 447 aa12.01□□□□□ -0.49
ABCA3-201ENST00000301732 PARP15Q460N3 678 aa12.01□□□□□ -0.49
ABCA3-201ENST00000301732 TNS2Q63HR2 1409 aa12.01□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms