RNA–Protein interactions for RNA: ENST00000293778.10

CXCL16-201, Transcript of C-X-C motif chemokine ligand 16, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CXCL16, Length 2,222 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL16-201ENST00000293778 LMNTD1Q8N9Z9 388 aa19.26■□□□□ 0.67
CXCL16-201ENST00000293778 SNX19Q92543 992 aa19.26■□□□□ 0.67
CXCL16-201ENST00000293778 WDR34Q96EX3 536 aa19.26■□□□□ 0.67
CXCL16-201ENST00000293778 LINC00615Q96LM1 132 aaPredicted RBP19.26■□□□□ 0.67
CXCL16-201ENST00000293778 SAMD11Q96NU1 681 aa19.26■□□□□ 0.67
CXCL16-201ENST00000293778 EFCAB11Q9BUY7 163 aa19.26■□□□□ 0.67
CXCL16-201ENST00000293778 VNN3Q9NY84 501 aa19.26■□□□□ 0.67
CXCL16-201ENST00000293778 EBF1Q9UH73 591 aa19.26■□□□□ 0.67
CXCL16-201ENST00000293778 PCDHGA8Q9Y5G5 932 aa19.26■□□□□ 0.67
CXCL16-201ENST00000293778 TCF20Q9UGU0 1960 aaKnown RBP19.26■□□□□ 0.67
CXCL16-201ENST00000293778 C1GALT1C1LP0DN25 315 aa19.25■□□□□ 0.67
CXCL16-201ENST00000293778 IDSP22304 550 aa19.25■□□□□ 0.67
CXCL16-201ENST00000293778 BIRC2Q13490 618 aa19.25■□□□□ 0.67
CXCL16-201ENST00000293778 SHQ1Q6PI26 577 aaKnown RBP19.25■□□□□ 0.67
CXCL16-201ENST00000293778 TMEM26Q6ZUK4 368 aa19.25■□□□□ 0.67
CXCL16-201ENST00000293778 GALNT10Q86SR1 603 aa19.25■□□□□ 0.67
CXCL16-201ENST00000293778 SFTPA1Q8IWL2 248 aa19.25■□□□□ 0.67
CXCL16-201ENST00000293778 NPAS3Q8IXF0 933 aa19.25■□□□□ 0.67
CXCL16-201ENST00000293778 ST13P5Q8NFI4 369 aaPredicted RBP19.25■□□□□ 0.67
CXCL16-201ENST00000293778 PHF12Q96QT6 1004 aa19.25■□□□□ 0.67
CXCL16-201ENST00000293778 TMEM106CQ9BVX2 250 aa19.25■□□□□ 0.67
CXCL16-201ENST00000293778 ADNPQ9H2P0 1102 aa19.25■□□□□ 0.67
CXCL16-201ENST00000293778 IL1RAPQ9NPH3 570 aa19.25■□□□□ 0.67
CXCL16-201ENST00000293778 TIMMDC1Q9NPL8 285 aa19.25■□□□□ 0.67
CXCL16-201ENST00000293778 ITM2CQ9NQX7 267 aa19.25■□□□□ 0.67
CXCL16-201ENST00000293778 CDC14AQ9UNH5 594 aa19.25■□□□□ 0.67
CXCL16-201ENST00000293778 ABCG2Q9UNQ0 655 aa19.25■□□□□ 0.67
CXCL16-201ENST00000293778 ORC6Q9Y5N6 252 aa19.25■□□□□ 0.67
CXCL16-201ENST00000293778 C17orf113A0A1B0GUU1 675 aa19.25■□□□□ 0.67
CXCL16-201ENST00000293778 ZNF8P17098 575 aaPredicted RBP19.25■□□□□ 0.67
CXCL16-201ENST00000293778 RAD23AP54725 363 aa19.25■□□□□ 0.67
CXCL16-201ENST00000293778 NEDD8Q15843 81 aa19.25■□□□□ 0.67
CXCL16-201ENST00000293778 TMEM52BQ4KMG9 183 aa19.25■□□□□ 0.67
CXCL16-201ENST00000293778 PAGE2BQ5JRK9 111 aa19.25■□□□□ 0.67
CXCL16-201ENST00000293778 GALNT18Q6P9A2 607 aa19.25■□□□□ 0.67
CXCL16-201ENST00000293778 ADGRD2Q7Z7M1 963 aa19.25■□□□□ 0.67
CXCL16-201ENST00000293778 DCP2Q8IU60 420 aaKnown RBP19.25■□□□□ 0.67
CXCL16-201ENST00000293778 HDAC2Q92769 488 aaKnown RBP19.25■□□□□ 0.67
CXCL16-201ENST00000293778 COQ8BQ96D53 544 aa19.25■□□□□ 0.67
CXCL16-201ENST00000293778 ASB16Q96NS5 453 aa19.25■□□□□ 0.67
CXCL16-201ENST00000293778 TMEFF2Q9UIK5 374 aaPredicted RBP19.25■□□□□ 0.67
CXCL16-201ENST00000293778 MUC22E2RYF6 1773 aaPredicted RBP19.25■□□□□ 0.67
CXCL16-201ENST00000293778 IL7RP16871 459 aa19.24■□□□□ 0.67
CXCL16-201ENST00000293778 CTBSQ01459 385 aa19.24■□□□□ 0.67
CXCL16-201ENST00000293778 TAP2Q03519 686 aa19.24■□□□□ 0.67
CXCL16-201ENST00000293778 C16orf72Q14CZ0 275 aa19.24■□□□□ 0.67
CXCL16-201ENST00000293778 RFX4Q33E94 735 aa19.24■□□□□ 0.67
CXCL16-201ENST00000293778 C10orf62Q5T681 223 aaPredicted RBP19.24■□□□□ 0.67
CXCL16-201ENST00000293778 BROXQ5VW32 411 aa19.24■□□□□ 0.67
CXCL16-201ENST00000293778 OR2T5Q6IEZ7 315 aa19.24■□□□□ 0.67
CXCL16-201ENST00000293778 ERN2Q76MJ5 926 aaKnown RBP19.24■□□□□ 0.67
CXCL16-201ENST00000293778 LAS2Q8IYD9 372 aa19.24■□□□□ 0.67
CXCL16-201ENST00000293778 OR2T29Q8NH02 315 aa19.24■□□□□ 0.67
CXCL16-201ENST00000293778 SMARCD2Q92925 531 aa19.24■□□□□ 0.67
CXCL16-201ENST00000293778 TBC1D20Q96BZ9 403 aa19.24■□□□□ 0.67
CXCL16-201ENST00000293778 C12orf43Q96C57 262 aaKnown RBP19.24■□□□□ 0.67
CXCL16-201ENST00000293778 TMEM245Q9H330 911 aa19.24■□□□□ 0.67
CXCL16-201ENST00000293778 TM9SF3Q9HD45 589 aa19.24■□□□□ 0.67
CXCL16-201ENST00000293778 SH3BP4Q9P0V3 963 aa19.24■□□□□ 0.67
CXCL16-201ENST00000293778 FZD4Q9ULV1 537 aa19.24■□□□□ 0.67
CXCL16-201ENST00000293778 GPR34Q9UPC5 381 aa19.24■□□□□ 0.67
CXCL16-201ENST00000293778 LOC100130705A0A1B0GUX0 176 aa19.24■□□□□ 0.67
CXCL16-201ENST00000293778 PIPSLA2A3N6 862 aa19.24■□□□□ 0.67
CXCL16-201ENST00000293778 FOXE1O00358 373 aaPredicted RBP19.24■□□□□ 0.67
CXCL16-201ENST00000293778 FABP3P05413 133 aa19.24■□□□□ 0.67
CXCL16-201ENST00000293778 PPIBP23284 216 aaKnown RBP19.24■□□□□ 0.67
CXCL16-201ENST00000293778 CRHBPP24387 322 aa19.24■□□□□ 0.67
CXCL16-201ENST00000293778 POLR2IP36954 125 aaKnown RBP19.24■□□□□ 0.67
CXCL16-201ENST00000293778 VEZF1Q14119 521 aa19.24■□□□□ 0.67
CXCL16-201ENST00000293778 NFE2L1Q14494 772 aa19.24■□□□□ 0.67
CXCL16-201ENST00000293778 HIST2H2ACQ16777 129 aaPredicted RBP19.24■□□□□ 0.67
CXCL16-201ENST00000293778 HIST2H2AA3Q6FI13 130 aa19.24■□□□□ 0.67
CXCL16-201ENST00000293778 MMAAQ8IVH4 418 aaKnown RBP19.24■□□□□ 0.67
CXCL16-201ENST00000293778 LRRC56Q8IYG6 542 aaPredicted RBP19.24■□□□□ 0.67
CXCL16-201ENST00000293778 SYNPOQ8N3V7 929 aa19.24■□□□□ 0.67
CXCL16-201ENST00000293778 OR2L2Q8NH16 312 aa19.24■□□□□ 0.67
CXCL16-201ENST00000293778 SLC5A11Q8WWX8 675 aa19.24■□□□□ 0.67
CXCL16-201ENST00000293778 SPATA9Q9BWV2 254 aa19.24■□□□□ 0.67
CXCL16-201ENST00000293778 EHD1Q9H4M9 534 aa19.24■□□□□ 0.67
CXCL16-201ENST00000293778 DMRT3Q9NQL9 472 aa19.24■□□□□ 0.67
CXCL16-201ENST00000293778 VPS4AQ9UN37 437 aa19.24■□□□□ 0.67
CXCL16-201ENST00000293778 CORO2BQ9UQ03 480 aa19.24■□□□□ 0.67
CXCL16-201ENST00000293778 C1orf226A1L170 272 aa19.23■□□□□ 0.67
CXCL16-201ENST00000293778 VEGFDO43915 354 aa19.23■□□□□ 0.67
CXCL16-201ENST00000293778 CPNE6O95741 557 aa19.23■□□□□ 0.67
CXCL16-201ENST00000293778 SEMG1P04279 462 aa19.23■□□□□ 0.67
CXCL16-201ENST00000293778 ZNF763Q0D2J5 394 aa19.23■□□□□ 0.67
CXCL16-201ENST00000293778 PDE12Q6L8Q7 609 aaKnown RBP19.23■□□□□ 0.67
CXCL16-201ENST00000293778 CBLL1Q75N03 491 aa19.23■□□□□ 0.67
CXCL16-201ENST00000293778 EIF3MQ7L2H7 374 aaKnown RBP19.23■□□□□ 0.67
CXCL16-201ENST00000293778 R3HCC1LQ7Z5L2 792 aaKnown RBP19.23■□□□□ 0.67
CXCL16-201ENST00000293778 VTCN1Q7Z7D3 282 aa19.23■□□□□ 0.67
CXCL16-201ENST00000293778 CHDHQ8NE62 594 aaPredicted RBP19.23■□□□□ 0.67
CXCL16-201ENST00000293778 ZNF420Q8TAQ5 688 aaPredicted RBP19.23■□□□□ 0.67
CXCL16-201ENST00000293778 CXorf40BQ96DE9 158 aa19.23■□□□□ 0.67
CXCL16-201ENST00000293778 ERLEC1Q96DZ1 483 aa19.23■□□□□ 0.67
CXCL16-201ENST00000293778 HSH2DQ96JZ2 352 aa19.23■□□□□ 0.67
CXCL16-201ENST00000293778 TUBA1CQ9BQE3 449 aa19.23■□□□□ 0.67
CXCL16-201ENST00000293778 GABARAPL1Q9H0R8 117 aa19.23■□□□□ 0.67
CXCL16-201ENST00000293778 DPEP2Q9H4A9 486 aa19.23■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms