RNA–Protein interactions for RNA: ENST00000289547.8

NPC1L1-201, Transcript of NPC1 like intracellular cholesterol transporter 1, humanhuman

TSL 1 (best) BASIC

Gene NPC1L1, Length 5,048 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1L1-201ENST00000289547 KCNJ8Q15842 424 aa11.05□□□□□ -0.64
NPC1L1-201ENST00000289547 C6orf141Q5SZD1 244 aa11.05□□□□□ -0.64
NPC1L1-201ENST00000289547 ENPP7Q6UWV6 458 aa11.05□□□□□ -0.64
NPC1L1-201ENST00000289547 TXNDC5Q8NBS9 432 aaKnown RBP11.05□□□□□ -0.64
NPC1L1-201ENST00000289547 C3orf58Q8NDZ4 430 aa11.05□□□□□ -0.64
NPC1L1-201ENST00000289547 ZNF641Q96N77 438 aaPredicted RBP11.05□□□□□ -0.64
NPC1L1-201ENST00000289547 FUNDC2Q9BWH2 189 aa11.05□□□□□ -0.64
NPC1L1-201ENST00000289547 HCN4Q9Y3Q4 1203 aa11.05□□□□□ -0.64
NPC1L1-201ENST00000289547 H3BMQ9 156 aa11.05□□□□□ -0.64
NPC1L1-201ENST00000289547 PDPK1O15530 556 aa11.05□□□□□ -0.64
NPC1L1-201ENST00000289547 OR7A10O76100 309 aa11.05□□□□□ -0.64
NPC1L1-201ENST00000289547 SLITRK5O94991 958 aa11.05□□□□□ -0.64
NPC1L1-201ENST00000289547 IL1R2P27930 398 aa11.05□□□□□ -0.64
NPC1L1-201ENST00000289547 SLC6A4P31645 630 aa11.05□□□□□ -0.64
NPC1L1-201ENST00000289547 PBX2P40425 430 aa11.05□□□□□ -0.64
NPC1L1-201ENST00000289547 ELAVL3Q14576 367 aaKnown RBP11.05□□□□□ -0.64
NPC1L1-201ENST00000289547 FAM174BQ3ZCQ3 159 aa11.05□□□□□ -0.64
NPC1L1-201ENST00000289547 TMEM164Q5U3C3 297 aa11.05□□□□□ -0.64
NPC1L1-201ENST00000289547 HLA-DQA1Q5Y7H0 255 aa11.05□□□□□ -0.64
NPC1L1-201ENST00000289547 SETD7Q8WTS6 366 aaKnown RBP11.05□□□□□ -0.64
NPC1L1-201ENST00000289547 ESAMQ96AP7 390 aa11.05□□□□□ -0.64
NPC1L1-201ENST00000289547 COG8Q96MW5 612 aa11.05□□□□□ -0.64
NPC1L1-201ENST00000289547 CWH43Q9H720 699 aa11.05□□□□□ -0.64
NPC1L1-201ENST00000289547 TAS2R7Q9NYW3 318 aa11.05□□□□□ -0.64
NPC1L1-201ENST00000289547 DNMT3BQ9UBC3 853 aaKnown RBP11.05□□□□□ -0.64
NPC1L1-201ENST00000289547 ZNF490Q9ULM2 529 aaPredicted RBP11.05□□□□□ -0.64
NPC1L1-201ENST00000289547 KIAA0100Q14667 2235 aaKnown RBP11.05□□□□□ -0.64
NPC1L1-201ENST00000289547 CCL22O00626 93 aa11.04□□□□□ -0.64
NPC1L1-201ENST00000289547 ADAMDEC1O15204 470 aa11.04□□□□□ -0.64
NPC1L1-201ENST00000289547 APBB3O95704 486 aa11.04□□□□□ -0.64
NPC1L1-201ENST00000289547 UROSP10746 265 aa11.04□□□□□ -0.64
NPC1L1-201ENST00000289547 NKX3-2P78367 333 aa11.04□□□□□ -0.64
NPC1L1-201ENST00000289547 LMAN2Q12907 356 aa11.04□□□□□ -0.64
NPC1L1-201ENST00000289547 KCNJ11Q14654 390 aa11.04□□□□□ -0.64
NPC1L1-201ENST00000289547 ZNF181Q2M3W8 571 aa11.04□□□□□ -0.64
NPC1L1-201ENST00000289547 SLC13A3Q8WWT9 602 aa11.04□□□□□ -0.64
NPC1L1-201ENST00000289547 LGALS12Q96DT0 336 aa11.04□□□□□ -0.64
NPC1L1-201ENST00000289547 BBS4Q96RK4 519 aa11.04□□□□□ -0.64
NPC1L1-201ENST00000289547 HCSTQ9UBK5 93 aa11.04□□□□□ -0.64
NPC1L1-201ENST00000289547 RPS6KB2Q9UBS0 482 aa11.04□□□□□ -0.64
NPC1L1-201ENST00000289547 CEPT1Q9Y6K0 416 aa11.04□□□□□ -0.64
NPC1L1-201ENST00000289547 COL4A1P02462 1669 aa11.04□□□□□ -0.64
NPC1L1-201ENST00000289547 A0A1W2PPC1 479 aa11.04□□□□□ -0.64
NPC1L1-201ENST00000289547 BEST1O76090 585 aa11.04□□□□□ -0.64
NPC1L1-201ENST00000289547 SORBS2O94875 1100 aaKnown RBP11.04□□□□□ -0.64
NPC1L1-201ENST00000289547 NDUFS1P28331 727 aa11.04□□□□□ -0.64
NPC1L1-201ENST00000289547 DPY19L3Q6ZPD9 716 aa11.04□□□□□ -0.64
NPC1L1-201ENST00000289547 ERN2Q76MJ5 926 aaKnown RBP11.04□□□□□ -0.64
NPC1L1-201ENST00000289547 MFSD6LQ8IWD5 586 aa11.04□□□□□ -0.64
NPC1L1-201ENST00000289547 OR52L1Q8NGH7 329 aa11.04□□□□□ -0.64
NPC1L1-201ENST00000289547 SPATA22Q8NHS9 363 aa11.04□□□□□ -0.64
NPC1L1-201ENST00000289547 KLK6Q92876 244 aa11.04□□□□□ -0.64
NPC1L1-201ENST00000289547 AURKBQ96GD4 344 aaPredicted RBP11.04□□□□□ -0.64
NPC1L1-201ENST00000289547 TMEM74Q96NL1 305 aa11.04□□□□□ -0.64
NPC1L1-201ENST00000289547 PRDM8Q9NQV8 689 aa11.04□□□□□ -0.64
NPC1L1-201ENST00000289547 CUEDC1Q9NWM3 386 aaPredicted RBP11.04□□□□□ -0.64
NPC1L1-201ENST00000289547 MED11Q9P086 117 aa11.04□□□□□ -0.64
NPC1L1-201ENST00000289547 IQCMA0A1B0GVH7 501 aa11.04□□□□□ -0.64
NPC1L1-201ENST00000289547 TSPAN6O43657 245 aa11.04□□□□□ -0.64
NPC1L1-201ENST00000289547 HLA-EP13747 358 aa11.04□□□□□ -0.64
NPC1L1-201ENST00000289547 PRKCHP24723 683 aa11.04□□□□□ -0.64
NPC1L1-201ENST00000289547 TLX1P31314 330 aaPredicted RBP11.04□□□□□ -0.64
NPC1L1-201ENST00000289547 OMPP47874 163 aa11.04□□□□□ -0.64
NPC1L1-201ENST00000289547 PPP5CP53041 499 aa11.04□□□□□ -0.64
NPC1L1-201ENST00000289547 RPS21P63220 83 aaKnown RBP11.04□□□□□ -0.64
NPC1L1-201ENST00000289547 RPA4Q13156 261 aa11.04□□□□□ -0.64
NPC1L1-201ENST00000289547 PIGKQ92643 395 aa11.04□□□□□ -0.64
NPC1L1-201ENST00000289547 TMEM203Q969S6 136 aa11.04□□□□□ -0.64
NPC1L1-201ENST00000289547 SLC6A15Q9H2J7 730 aa11.04□□□□□ -0.64
NPC1L1-201ENST00000289547 NMUR1Q9HB89 426 aa11.04□□□□□ -0.64
NPC1L1-201ENST00000289547 TCAF1Q9Y4C2 921 aa11.04□□□□□ -0.64
NPC1L1-201ENST00000289547 H0YJX3 145 aa11.04□□□□□ -0.64
NPC1L1-201ENST00000289547 ITGA3P26006 1051 aa11.04□□□□□ -0.64
NPC1L1-201ENST00000289547 ZNF81P51508 661 aa11.04□□□□□ -0.64
NPC1L1-201ENST00000289547 ABRQ12979 859 aa11.04□□□□□ -0.64
NPC1L1-201ENST00000289547 KCNAB2Q13303 367 aa11.04□□□□□ -0.64
NPC1L1-201ENST00000289547 TSTQ16762 297 aaKnown RBP11.04□□□□□ -0.64
NPC1L1-201ENST00000289547 XKRXQ6PP77 449 aa11.04□□□□□ -0.64
NPC1L1-201ENST00000289547 TIGD4Q8IY51 512 aa11.04□□□□□ -0.64
NPC1L1-201ENST00000289547 SHKBP1Q8TBC3 707 aa11.04□□□□□ -0.64
NPC1L1-201ENST00000289547 JPH3Q8WXH2 748 aaPredicted RBP11.04□□□□□ -0.64
NPC1L1-201ENST00000289547 FCRL5Q96RD9 977 aa11.04□□□□□ -0.64
NPC1L1-201ENST00000289547 BARD1Q99728 777 aaKnown RBP11.04□□□□□ -0.64
NPC1L1-201ENST00000289547 C1QTNF1Q9BXJ1 281 aa11.04□□□□□ -0.64
NPC1L1-201ENST00000289547 C11orf16Q9NQ32 467 aa11.04□□□□□ -0.64
NPC1L1-201ENST00000289547 HEMK1Q9Y5R4 338 aaPredicted RBP11.04□□□□□ -0.64
NPC1L1-201ENST00000289547 FAM234BA2RU67 622 aa11.03□□□□□ -0.64
NPC1L1-201ENST00000289547 MPZL2O60487 215 aa11.03□□□□□ -0.64
NPC1L1-201ENST00000289547 NR2F1P10589 423 aa11.03□□□□□ -0.64
NPC1L1-201ENST00000289547 FAUP35544 74 aaKnown RBP11.03□□□□□ -0.64
NPC1L1-201ENST00000289547 CCR10P46092 362 aa11.03□□□□□ -0.64
NPC1L1-201ENST00000289547 CSTF1Q05048 431 aaKnown RBP11.03□□□□□ -0.64
NPC1L1-201ENST00000289547 SERINC3Q13530 473 aa11.03□□□□□ -0.64
NPC1L1-201ENST00000289547 PLA2G4EQ3MJ16 856 aa11.03□□□□□ -0.64
NPC1L1-201ENST00000289547 XKR4Q5GH76 650 aa11.03□□□□□ -0.64
NPC1L1-201ENST00000289547 SNAP47Q5SQN1 464 aa11.03□□□□□ -0.64
NPC1L1-201ENST00000289547 SH3PXD2AQ5TCZ1 1133 aa11.03□□□□□ -0.64
NPC1L1-201ENST00000289547 FAM20CQ8IXL6 584 aa11.03□□□□□ -0.64
NPC1L1-201ENST00000289547 ZNF366Q8N895 744 aa11.03□□□□□ -0.64
NPC1L1-201ENST00000289547 TOR1AIP2Q8NFQ8 470 aa11.03□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms